Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19]
59,587 sequences; 511,738,253 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq117 111 1e-19
seq1300 96.9 3e-15
seq7865 86.0 5e-12
>seq117
Length=549210
Score = 111 bits (122), Expect = 1e-19
Identities = 304/464 (66%), Gaps = 10/464 (2%)
Strand=Plus/Plus
Query 128778 CTTGTCCACGGTAAATTTAATAGCGTCCGCTGCCGGCTTGGTGCGCAAATAGTACATGCC 128837
||||||||| || || || || ||| ||| || | ||| ||||||| |||||||||||
Sbjct 312223 CTTGTCCACCGTGAACTTGATCGCGCTCGCGGCGGCCTTTGTGCGCAGGTAGTACATGCC 312282
Query 128838 TGTTTTCAAACCGCTTTTCCAAGTGTGCATGTGAATCGTGGTCAACAATGCGTAGGTGGG 128897
|| |||| || | ||||| | || | ||| || |||| | | ||||| | ||
Sbjct 312283 GGTCTTCACGCCCTTCTTCCACGCGTAGAAGTGCATGCTGGTAAGCTTGGCGTAATTCGG 312342
Query 128898 TTGACTCaaaaaaaTATTAAATGATTGACTTTGATCAATAAAGGGGCCGCGATCGGCAGC 128957
| | |||||| | ||| ||||| || || || |||| |||||||||||||||
Sbjct 312343 CTCGGCGAGGTGAATATTCAGTGACTGACTCTGGTCGATGAAGGCGCCGCGATCGGCAGC 312402
Query 128958 CATACCAATCAAATTTTTCACTTTCATTTCCCACACCGTTTTGTAAAGCTCTCTCACGTG 129017
||| || | | ||| || ||||| || || ||||| |||| ||| ||
Sbjct 312403 CATGTTGATTATCGTCTTCTGCGAGATCTCCCAGACGGTCTTGTAGAGCTGCTTCAGGTC 312462
Query 129018 TTTTGGTATTTCTTCAATGTTCTGCACGCTGCCGTTGTTTGCAATAATTTTGTTTCGCAT 129077
| || || || || | |||||| ||| |||||| | || || || ||| |||
Sbjct 312463 GTCCGGGATCTCCTCGACGTTCTGAACGGAGCCGTTCTCGGCGATGATGCGGTTCTTCAT 312522
Query 129078 CTGTTCGTTGTACA-----AATTCAGTTTGATCAAATCGTCGGTCAAGTATTTGTTTATT 129132
|| |||| ||| | || || | || | || | || || | ||| |
Sbjct 312523 GTGGTCGTCCCACAGGCCGCACTCGGTGAGGTC----CTTCAG-CAGGTGGTGGTTGACG 312577
Query 129133 ACTTGAAAGTCACCCGCCAAAACGCGCCGAACGTAAATGTTGTTGGTGAACGGCTCAAAC 129192
| || || || || | | |||||||| ||| |||||| | ||| ||| ||| | |
Sbjct 312578 ATCTGGAACTCGCCGGAGAGCACGCGCCGCGAGTAGATGTTGCTCGTGTACGCCTCGATC 312637
Query 129193 GATTCATTGTTGCCTAATATTTGAGCCGTTGTCGCGGTGGGCAT 129236
|| ||||||||||| | || || ||||| | |||||| |||||
Sbjct 312638 GACTCATTGTTGCCGAGGATCTGTGCCGTCGACGCGGTCGGCAT 312681
>seq1300
Length=83366
Score = 96.9 bits (106), Expect = 3e-15
Identities = 161/233 (69%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 22213 GTAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAA 22272
|| || ||||| || ||||| || || | || ||||| || |||| | ||||| ||
Sbjct 7658 GTCAATATGCAGATCTTTGTAAAGACCCTGACTGGTAAGACCATCACCTTGGAAGTAGAG 7717
Query 22273 ACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCC 22332
| | || | | | || | | || ||||| || ||||||||||| || || ||
Sbjct 7718 GCATCTGACAGCATTGAAAACGTGAAGGCCAAAATCCAGGACAAGGAGGGAATCCCCCCG 7777
Query 22333 GATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGAT 22392
|||||||| || || || || ||||| || ||| | || ||| |||||| | |||||
Sbjct 7778 GATCAACAGCGCCTGATCTTCGCCGGAAAGCAGCTGGAAGATGGCCGCACTCTGTCCGAC 7837
Query 22393 TACAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445
|||||||| || || || || || | || | ||| |||| |||| |||||
Sbjct 7838 TACAACATCCAGAAGGAGTCTACTCTTCACCTGGTTCTGCGTCTGCGTGGAGG 7890
Score = 87.8 bits (96), Expect = 2e-12
Identities = 98/131 (75%), Gaps = 0/131 (0%)
Strand=Plus/Plus
Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362
||||| || ||||||||||| || || || |||||||| || || || || ||||| |||
Sbjct 7976 AAAATCCAGGACAAGGAGGGAATCCCCCCGGATCAACAGCGCCTGATCTTCGCCGGAAAA 8035
Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422
||| | || ||| |||||| | ||||| |||||||| || || || || || | ||
Sbjct 8036 CAGCTGGAAGATGGCCGCACTCTGTCCGACTACAACATCCAGAAGGAGTCTACTCTTCAC 8095
Query 22423 TTAGTTTTGCG 22433
| ||| ||||
Sbjct 8096 CTGGTTCTGCG 8106
>seq7865
Length=4356
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || ||||| ||||| | ||||||||||| |||| ||||| || || | | |
Sbjct 3820 ATGCAGATCTTTGTGAAAACCCTCACCGGTAAAACCATCACCCTTGAGGTAGAGGCAAGC 3761
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
||| | | || || | || || || |||||||| ||||| || || || |||||
Sbjct 3760 GATTCAATCGAAAATGTGAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCAGATCAG 3701
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | | || ||||| ||||| ||| | || ||| ||||| | || ||||||
Sbjct 3700 CAGAGGTTGATCTTTGCTGGCAAGCAGCTGGAAGATGGTCGCACTCTGAGTGACTACAAC 3641
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445
|| || || || || ||| | || | || |||| |||| || ||
Sbjct 3640 ATCCAGAAGGAGTCTACCCTTCACCTTGTCCTGCGTCTGCGTGGTGG 3594
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419423186574655
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |