Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq117 111 1e-19 seq1300 96.9 3e-15 seq7865 86.0 5e-12 >seq117 Length=549210 Score = 111 bits (122), Expect = 1e-19 Identities = 304/464 (66%), Gaps = 10/464 (2%) Strand=Plus/Plus Query 128778 CTTGTCCACGGTAAATTTAATAGCGTCCGCTGCCGGCTTGGTGCGCAAATAGTACATGCC 128837 ||||||||| || || || || ||| ||| || | ||| ||||||| ||||||||||| Sbjct 312223 CTTGTCCACCGTGAACTTGATCGCGCTCGCGGCGGCCTTTGTGCGCAGGTAGTACATGCC 312282 Query 128838 TGTTTTCAAACCGCTTTTCCAAGTGTGCATGTGAATCGTGGTCAACAATGCGTAGGTGGG 128897 || |||| || | ||||| | || | ||| || |||| | | ||||| | || Sbjct 312283 GGTCTTCACGCCCTTCTTCCACGCGTAGAAGTGCATGCTGGTAAGCTTGGCGTAATTCGG 312342 Query 128898 TTGACTCaaaaaaaTATTAAATGATTGACTTTGATCAATAAAGGGGCCGCGATCGGCAGC 128957 | | |||||| | ||| ||||| || || || |||| ||||||||||||||| Sbjct 312343 CTCGGCGAGGTGAATATTCAGTGACTGACTCTGGTCGATGAAGGCGCCGCGATCGGCAGC 312402 Query 128958 CATACCAATCAAATTTTTCACTTTCATTTCCCACACCGTTTTGTAAAGCTCTCTCACGTG 129017 ||| || | | ||| || ||||| || || ||||| |||| ||| || Sbjct 312403 CATGTTGATTATCGTCTTCTGCGAGATCTCCCAGACGGTCTTGTAGAGCTGCTTCAGGTC 312462 Query 129018 TTTTGGTATTTCTTCAATGTTCTGCACGCTGCCGTTGTTTGCAATAATTTTGTTTCGCAT 129077 | || || || || | |||||| ||| |||||| | || || || ||| ||| Sbjct 312463 GTCCGGGATCTCCTCGACGTTCTGAACGGAGCCGTTCTCGGCGATGATGCGGTTCTTCAT 312522 Query 129078 CTGTTCGTTGTACA-----AATTCAGTTTGATCAAATCGTCGGTCAAGTATTTGTTTATT 129132 || |||| ||| | || || | || | || | || || | ||| | Sbjct 312523 GTGGTCGTCCCACAGGCCGCACTCGGTGAGGTC----CTTCAG-CAGGTGGTGGTTGACG 312577 Query 129133 ACTTGAAAGTCACCCGCCAAAACGCGCCGAACGTAAATGTTGTTGGTGAACGGCTCAAAC 129192 | || || || || | | |||||||| ||| |||||| | ||| ||| ||| | | Sbjct 312578 ATCTGGAACTCGCCGGAGAGCACGCGCCGCGAGTAGATGTTGCTCGTGTACGCCTCGATC 312637 Query 129193 GATTCATTGTTGCCTAATATTTGAGCCGTTGTCGCGGTGGGCAT 129236 || ||||||||||| | || || ||||| | |||||| ||||| Sbjct 312638 GACTCATTGTTGCCGAGGATCTGTGCCGTCGACGCGGTCGGCAT 312681 >seq1300 Length=83366 Score = 96.9 bits (106), Expect = 3e-15 Identities = 161/233 (69%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 22213 GTAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAA 22272 || || ||||| || ||||| || || | || ||||| || |||| | ||||| || Sbjct 7658 GTCAATATGCAGATCTTTGTAAAGACCCTGACTGGTAAGACCATCACCTTGGAAGTAGAG 7717 Query 22273 ACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCC 22332 | | || | | | || | | || ||||| || ||||||||||| || || || Sbjct 7718 GCATCTGACAGCATTGAAAACGTGAAGGCCAAAATCCAGGACAAGGAGGGAATCCCCCCG 7777 Query 22333 GATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGAT 22392 |||||||| || || || || ||||| || ||| | || ||| |||||| | ||||| Sbjct 7778 GATCAACAGCGCCTGATCTTCGCCGGAAAGCAGCTGGAAGATGGCCGCACTCTGTCCGAC 7837 Query 22393 TACAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 |||||||| || || || || || | || | ||| |||| |||| ||||| Sbjct 7838 TACAACATCCAGAAGGAGTCTACTCTTCACCTGGTTCTGCGTCTGCGTGGAGG 7890 Score = 87.8 bits (96), Expect = 2e-12 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 ||||| || ||||||||||| || || || |||||||| || || || || ||||| ||| Sbjct 7976 AAAATCCAGGACAAGGAGGGAATCCCCCCGGATCAACAGCGCCTGATCTTCGCCGGAAAA 8035 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422 ||| | || ||| |||||| | ||||| |||||||| || || || || || | || Sbjct 8036 CAGCTGGAAGATGGCCGCACTCTGTCCGACTACAACATCCAGAAGGAGTCTACTCTTCAC 8095 Query 22423 TTAGTTTTGCG 22433 | ||| |||| Sbjct 8096 CTGGTTCTGCG 8106 >seq7865 Length=4356 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| ||||| | ||||||||||| |||| ||||| || || | | | Sbjct 3820 ATGCAGATCTTTGTGAAAACCCTCACCGGTAAAACCATCACCCTTGAGGTAGAGGCAAGC 3761 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||| | | || || | || || || |||||||| ||||| || || || ||||| Sbjct 3760 GATTCAATCGAAAATGTGAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCAGATCAG 3701 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | || ||||| ||||| ||| | || ||| ||||| | || |||||| Sbjct 3700 CAGAGGTTGATCTTTGCTGGCAAGCAGCTGGAAGATGGTCGCACTCTGAGTGACTACAAC 3641 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || || || || || ||| | || | || |||| |||| || || Sbjct 3640 ATCCAGAAGGAGTCTACCCTTCACCTTGTCCTGCGTCTGCGTGGTGG 3594 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419423186574655