Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq387 96.9 7e-15 seq734 95.1 2e-14 seq632 89.7 1e-12 seq291 87.8 4e-12 seq82 87.8 4e-12 seq884 86.0 1e-11 seq56 84.2 4e-11 >seq387 Length=265947 Score = 96.9 bits (106), Expect = 7e-15 Identities = 67/76 (88%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 142500 GATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTC 142559 |||||||||| |||||||||||||||||| | ||||||||||| | |||||||||||| Sbjct 256684 GATAGCCCGGCTAGCTCAGTCGGTAGAGCACAGGACTCTTAATCCTGGGGTCGTGGGTTC 256743 Query 142560 GAGCCCCACATCGGGC 142575 ||||||||| | |||| Sbjct 256744 GAGCCCCACGTTGGGC 256759 >seq734 Length=159364 Score = 95.1 bits (104), Expect = 2e-14 Identities = 71/82 (87%), Gaps = 1/82 (1%) Strand=Plus/Plus Query 142501 ATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAAT-CTAGTGGTCGTGGGTTC 142559 ||||||||| |||||||| ||||||||| | |||||||||| || | |||||||||||| Sbjct 145659 ATAGCCCGGCTAGCTCAGGCGGTAGAGCACAGGACTCTTAATCCTGGCGGTCGTGGGTTC 145718 Query 142560 GAGCCCCACATCGGGCAGAAGT 142581 ||||||||| | |||| ||||| Sbjct 145719 GAGCCCCACGTTGGGCCGAAGT 145740 Score = 95.1 bits (104), Expect = 2e-14 Identities = 66/75 (88%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 142501 ATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCG 142560 ||||||||| |||||||||||||||||| | ||||||||||| | ||||||||||||| Sbjct 155251 ATAGCCCGGCTAGCTCAGTCGGTAGAGCACAGGACTCTTAATCCTGGGGTCGTGGGTTCG 155192 Query 142561 AGCCCCACATCGGGC 142575 |||||||| | |||| Sbjct 155191 AGCCCCACGTTGGGC 155177 >seq632 Length=181533 Score = 89.7 bits (98), Expect = 1e-12 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 142502 TAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGA 142561 ||||| || |||||||||||||||||| ||||||||||||| |||||||||||||| Sbjct 70766 TAGCCTGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGA 70707 Query 142562 GCCCCACATCGGGC 142575 ||||||| | |||| Sbjct 70706 GCCCCACGTTGGGC 70693 >seq291 Length=319556 Score = 87.8 bits (96), Expect = 4e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| | ||||||||||| | |||||||||||| || Sbjct 316169 AGCCCGGCTAGCTCAGTCGGTAGAGCACGGGACTCTTAATCCCGGGGTCGTGGGTTCAAG 316228 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 316229 CCCCACGTTGGGC 316241 Score = 87.8 bits (96), Expect = 4e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| | ||||||||||| | |||||||||||| || Sbjct 316920 AGCCCGGCTAGCTCAGTCGGTAGAGCACGGGACTCTTAATCCCGGGGTCGTGGGTTCAAG 316979 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 316980 CCCCACGTTGGGC 316992 >seq82 Length=757965 Score = 87.8 bits (96), Expect = 4e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| | ||||||||||| | |||||||||||| || Sbjct 653838 AGCCCGGCTAGCTCAGTCGGTAGAGCACGGGACTCTTAATCCCGGGGTCGTGGGTTCAAG 653779 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 653778 CCCCACGTTGGGC 653766 >seq884 Length=130406 Score = 86.0 bits (94), Expect = 1e-11 Identities = 61/70 (87%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 142506 CCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCC 142565 ||| ||||||||||||||||||| | ||||||||||| | |||||||||||||||||| Sbjct 99564 CCGCTTAGCTCAGTCGGTAGAGCACAGGACTCTTAATCCTGGGGTCGTGGGTTCGAGCCC 99623 Query 142566 CACATCGGGC 142575 ||| | |||| Sbjct 99624 CACGTTGGGC 99633 >seq56 Length=829856 Score = 84.2 bits (92), Expect = 4e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 142502 TAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGA 142561 ||||| || |||||||||||||||||| | ||||||||||| | |||||||||||| | Sbjct 476827 TAGCCTGGCTAGCTCAGTCGGTAGAGCACGGGACTCTTAATCCCGGGGTCGTGGGTTCAA 476768 Query 142562 GCCCCACATCGGGC 142575 ||||||| | |||| Sbjct 476767 GCCCCACGTTGGGC 476754 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027052089322667