Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq698 199 7e-46 seq1300 170 4e-37 seq7865 131 3e-25 seq734 86.0 1e-11 seq387 86.0 1e-11 >seq698 Length=247709 Score = 199 bits (220), Expect = 7e-46 Identities = 251/345 (73%), Gaps = 0/345 (0%) Strand=Plus/Plus Query 268246 CTGGAGCATTTTCCACATTGCTTCGACATAGTCCCGCGCATGGCCCCAATCGCGCTTTGC 268305 ||| ||||| |||||| || ||||| ||||| ||||| |||||||| ||||| | Sbjct 39543 CTGCAGCATGCGCCACATGGCGTCGACGTAGTCGCGCGCGTGGCCCCAGTCGCGACGCGA 39602 Query 268306 GTCCATGTTCCCGAGGAACAGGCATTTCTGCTTGCCGAGCTTCACGCGTGCAAGACCGCG 268365 ||||| ||| ||||| || || | ||||| ||||| | | || | | | || Sbjct 39603 GTCCAGGTTGCCGAGCTCCACGCGCTCCTGCTGCCCGAGGTGGATCTTCGCGACAGCACG 39662 Query 268366 AGTGATTTTTCGGGTCACGAACGTCTCGCCACGTAGAGGGCTCTCGTGGTTGAAGAGGAT 268425 ||||| || || || ||||||||||||||||| | || |||||||||||||||||| Sbjct 39663 CGTGATCTTACGCGTGACGAACGTCTCGCCACGCCGCGGCGACTCGTGGTTGAAGAGGAT 39722 Query 268426 GCCGTTGCACGCGAACATGCCATATGCCTCACGGTAGTTCACGACCGTCCAGTATGCAAA 268485 ||||||||||||| | ||||| || ||||| ||| |||| ||||| ||||||| || | Sbjct 39723 GCCGTTGCACGCGTAGATGCCGTAGGCCTCGCGGAAGTTGACGACGATCCAGTAGGCGTA 39782 Query 268486 CATCTTTGCAACTGCGTACGGAGAACGTGGATGGAAGGGCGTCGTGATCTTTTGAGGGAT 268545 | ||| || || ||||| || || || || | ||| |||||||| || || || Sbjct 39783 GAGCTTGGCGACCGCGTAGGGTGAGCGCGGGTAGAAAGGCGTCGTCTCACGCTGCGGTAT 39842 Query 268546 TTCTCGGACTTTGCCAAAGAGCTCGGAGGTCGATGCTTGGTAGAA 268590 || | || |||||| ||||||| || ||||| |||||||| Sbjct 39843 CTCCTGCACCTTGCCATAGAGCTCACTCGTAGATGCCTGGTAGAA 39887 >seq1300 Length=83366 Score = 170 bits (188), Expect = 4e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| || || |||| |||| ||| || || ||||| || |||||||| || ||||| Sbjct 7890 CCTCCACGCAGACGCAGAACCAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAC 7831 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | |||||||| | |||||| |||||||| || || | ||||| || || || Sbjct 7830 AGAGTGCGGCCATCTTCCAGCTGCTTTCCGGCGAAGATCAGGCGCTGTTGATCCGGGGGG 7771 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || |||||||| || || || ||||| ||| || ||| |||| | || |||||| Sbjct 7770 ATTCCCTCCTTGTCCTGGATTTTGGCCTTCACGTTTTCAATGCTGTCAGATGCCTCTACT 7711 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||||||||||||| || || || |||||||| || || |||||||| Sbjct 7710 TCCAAGGTGATGGTCTTACCAGTCAGGGTCTTTACAAAGATCTGCAT 7664 Score = 154 bits (170), Expect = 3e-32 Identities = 163/215 (76%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 68247 CGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCA 68306 |||| |||| ||| || || ||||| || |||||||| || ||||| || || | ||| Sbjct 8106 CGCAGAACCAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCA 8047 Query 68307 TCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTG 68366 ||||| | ||| || |||||||| || || | ||||| || || || || || |||||| Sbjct 8046 TCTTCCAGCTGTTTTCCGGCGAAGATCAGGCGCTGTTGATCCGGGGGGATTCCCTCCTTG 7987 Query 68367 TCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATG 68426 || || || || ||||| ||| || ||| ||| | || |||||||| ||||||||| Sbjct 7986 TCCTGGATTTTGGCCTTCACGTTTTCAATGCAGTCAGATGCCTCTACTTCTAAGGTGATG 7927 Query 68427 GTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || || |||||||||||||| || ||||| Sbjct 7926 GTCTTGCCAGTCAGGGTCTTGACGAAGATTTGCAT 7892 >seq7865 Length=4356 Score = 131 bits (144), Expect = 3e-25 Identities = 171/237 (72%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 68225 ATTTTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTT 68284 |||||| ||||| || || || |||| |||| ||| || || ||||| || |||||||| Sbjct 3356 ATTTTAGTTTCCACCACGCAGACGCAGGACCAGGTGAAGGGTAGACTCCTTCTGGATGTT 3415 Query 68285 ATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTG 68344 || || || || | |||||||| | |||||| || || || || | || || || Sbjct 3416 GTAGTCACTCAGAGTGCGACCATCTTCCAGCTGCTTGCCAGCAAAGATCAACCTCTGCTG 3475 Query 68345 GTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGC 68404 || || || ||||| || |||||||| ||||| ||||| || || || | || Sbjct 3476 ATCCGGGGGGATGCCCTCTTTGTCTTGGATCTTGGCCTTCACATTTTCAATCGAATCACT 3535 Query 68405 TGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || || | |||||||||||| || |||||||| || || || |||||||| Sbjct 3536 TGCCTCGACCTCAAGGGTGATGGTTTTACCGGTGAGGGTTTTCACAAAGATCTGCAT 3592 Score = 122 bits (134), Expect = 2e-22 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || |||| || | ||| || || ||||| || |||||||| || || Sbjct 3594 CCACCACGCAGACGCAGGACAAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCACTC 3653 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | |||||||| | |||||| || || || || | || || || || || || Sbjct 3654 AGAGTGCGACCATCTTCCAGCTGCTTGCCAGCAAAGATCAACCTCTGCTGATCTGGGGGG 3713 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| || |||||||| ||||| ||||| || ||||| | || || ||||| Sbjct 3714 ATGCCCTCTTTGTCTTGGATCTTGGCCTTCACATTTTCGATTGAATCGCTTGCCTCTACC 3773 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | |||||||||||| || |||||||| || || || |||||||| Sbjct 3774 TCAAGGGTGATGGTTTTACCGGTGAGGGTTTTCACAAAGATCTGCAT 3820 >seq734 Length=159364 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515 |||||| |||||||||||| ||||| || | ||||||| | || |||||||||||||||| Sbjct 155248 GCCCGGCTAGCTCAGTCGGTAGAGCACAGGACTCTTAATCCTGGGGTCGTGGGTTCGAGC 155189 Query 84516 CCCACATCGGGC 84527 ||||| | |||| Sbjct 155188 CCCACGTTGGGC 155177 >seq387 Length=265947 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515 |||||| |||||||||||| ||||| || | ||||||| | || |||||||||||||||| Sbjct 256688 GCCCGGCTAGCTCAGTCGGTAGAGCACAGGACTCTTAATCCTGGGGTCGTGGGTTCGAGC 256747 Query 84516 CCCACATCGGGC 84527 ||||| | |||| Sbjct 256748 CCCACGTTGGGC 256759 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 920935941075640