Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_009234.1 Length=35741 Score E Sequences producing significant alignments: (Bits) Value seq24545 116 8e-22 seq52478 104 5e-18 >seq24545 Length=459 Score = 116 bits (128), Expect = 8e-22 Identities = 148/201 (74%), Gaps = 2/201 (1%) Strand=Plus/Minus Query 11129 GGGAACGTCAGGTTGTGATACGGGCACTGCTT-GTCGGCTTCGGTGAAGTAGCAGTCCGG 11187 || |||||||| || ||||| ||||||||||| || || ||| ||||| || || || Sbjct 421 GGAAACGTCAGATTATGATAAGGGCACTGCTTAGTTGG-TTCAGTGAAATAACAATCATT 363 Query 11188 CCCCTCGTTGACGATCAGGCGGCCGTCGCGCCATGCAAGCCCGACGAAGTTCGCGGCCTG 11247 ||||||||| || | ||| ||| | ||| |||| |||||| |||||| | || | Sbjct 362 CCCCTCGTTAACCACCAGCTTGCCCTGTTTCCACGCAACCCCGACAAAGTTCACCGCATC 303 Query 11248 GCGCGCGCCGAGGTCGGCTCCACGCTCAAGTATGTTGACCATGCGCTTGAACGGCGCCGG 11307 || ||||| |||| ||||||||||| ||||| || |||| || || ||| || || Sbjct 302 ACGGGCGCCAAGGTGAGCTCCACGCTCTAGTATATTCACCAGTCGATTAAACTGCTGAGG 243 Query 11308 CGCCCAGATCGGGCCGAATTT 11328 | |||| ||||||||||| Sbjct 242 CAAATAGATAGGGCCGAATTT 222 >seq52478 Length=231 Score = 104 bits (114), Expect = 5e-18 Identities = 123/167 (74%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 10691 ACGGGCACATCCTCGCCGGCCAGCATCACGGGCGCGCACAACAGGTATTCCGTCATGTCG 10750 || || |||||||| || || |||| ||| ||||| | | || ||||| |||| || Sbjct 17 ACCGGAACATCCTCACCAGCGAGCAACACAGGCGCACTGATCAAATATTCAGTCAGATCA 76 Query 10751 GTGCCGCGGCGCGTCACGGTGTACTGGTAGTTCTCCTGCAACAGCCCGACCGCCTTGTCG 10810 | || || | || | ||||||||||| ||||||||| || | | |||||||| ||| Sbjct 77 GCACCACGCCTTGTAATCGTGTACTGGTAACTCTCCTGCAGCAACGCCACCGCCTTATCG 136 Query 10811 ATTACGTCCTGTCGACGCGCGGACAGCTCTTCCCATCCGACCGGGTG 10857 || | | ||| | ||| ||||| | ||||||||| || |||||||| Sbjct 137 ATGATCTGCTGACCACGAGCGGATATCTCTTCCCAGCCAACCGGGTG 183 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 114168757482882