Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19]
59,587 sequences; 511,738,253 total letters
Query= NC_009234.1
Length=35741
Score E
Sequences producing significant alignments: (Bits) Value
seq24545 116 8e-22
seq52478 104 5e-18
>seq24545
Length=459
Score = 116 bits (128), Expect = 8e-22
Identities = 148/201 (74%), Gaps = 2/201 (1%)
Strand=Plus/Minus
Query 11129 GGGAACGTCAGGTTGTGATACGGGCACTGCTT-GTCGGCTTCGGTGAAGTAGCAGTCCGG 11187
|| |||||||| || ||||| ||||||||||| || || ||| ||||| || || ||
Sbjct 421 GGAAACGTCAGATTATGATAAGGGCACTGCTTAGTTGG-TTCAGTGAAATAACAATCATT 363
Query 11188 CCCCTCGTTGACGATCAGGCGGCCGTCGCGCCATGCAAGCCCGACGAAGTTCGCGGCCTG 11247
||||||||| || | ||| ||| | ||| |||| |||||| |||||| | || |
Sbjct 362 CCCCTCGTTAACCACCAGCTTGCCCTGTTTCCACGCAACCCCGACAAAGTTCACCGCATC 303
Query 11248 GCGCGCGCCGAGGTCGGCTCCACGCTCAAGTATGTTGACCATGCGCTTGAACGGCGCCGG 11307
|| ||||| |||| ||||||||||| ||||| || |||| || || ||| || ||
Sbjct 302 ACGGGCGCCAAGGTGAGCTCCACGCTCTAGTATATTCACCAGTCGATTAAACTGCTGAGG 243
Query 11308 CGCCCAGATCGGGCCGAATTT 11328
| |||| |||||||||||
Sbjct 242 CAAATAGATAGGGCCGAATTT 222
>seq52478
Length=231
Score = 104 bits (114), Expect = 5e-18
Identities = 123/167 (74%), Gaps = 0/167 (0%)
Strand=Plus/Plus
Query 10691 ACGGGCACATCCTCGCCGGCCAGCATCACGGGCGCGCACAACAGGTATTCCGTCATGTCG 10750
|| || |||||||| || || |||| ||| ||||| | | || ||||| |||| ||
Sbjct 17 ACCGGAACATCCTCACCAGCGAGCAACACAGGCGCACTGATCAAATATTCAGTCAGATCA 76
Query 10751 GTGCCGCGGCGCGTCACGGTGTACTGGTAGTTCTCCTGCAACAGCCCGACCGCCTTGTCG 10810
| || || | || | ||||||||||| ||||||||| || | | |||||||| |||
Sbjct 77 GCACCACGCCTTGTAATCGTGTACTGGTAACTCTCCTGCAGCAACGCCACCGCCTTATCG 136
Query 10811 ATTACGTCCTGTCGACGCGCGGACAGCTCTTCCCATCCGACCGGGTG 10857
|| | | ||| | ||| ||||| | ||||||||| || ||||||||
Sbjct 137 ATGATCTGCTGACCACGAGCGGATATCTCTTCCCAGCCAACCGGGTG 183
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 114168757482882
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |