Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_009447.1 Length=52414 Score E Sequences producing significant alignments: (Bits) Value seq2646 176 2e-39 seq5218 82.4 3e-11 >seq2646 Length=27379 Score = 176 bits (194), Expect = 2e-39 Identities = 453/680 (67%), Gaps = 9/680 (1%) Strand=Plus/Minus Query 1253 CTGTATGAAGGCACTCGCGGCCCCGGCAAGACGGATGCGCAATTGATGAAGTTCCGGCGC 1312 || |||||||| ||| | || || || ||||| || || ||| | ||| | || || ||| Sbjct 18250 CTTTATGAAGGGACTAGGGGGCCGGGGAAGACCGACGCTCAAGTAATGTACTTTCGTCGC 18191 Query 1313 TATGTCGGCCTCGGCTATGGCCGGTTCTGGCGCGGGATCATTTTCGACCGTGAATACAAA 1372 | ||| || || || || || | |||||||||||| | ||||| || | ||| || ||| Sbjct 18190 TTTGTTGGTCTTGGTTACGGACACTTCTGGCGCGGGGTAATTTTTGATCTTGAGTATAAA 18131 Query 1373 AATCTCGATGACTTGGTATCCAAGAGCCAGCGTTGGTTTCCGCTATTCGAGGATGGCGCG 1432 ||||| |||||||| |||| || | || ||||| | | || | || |||||| Sbjct 18130 AATCTTGATGACTTAATATCTAAATCAAAACGATGGTTCCGTCAGTTTAATGACGGCGCG 18071 Query 1433 AAGTTCA-AGGCATCGAAGTCCGATTATCGCTGGGTCTGGCCTACCGGCGAAGAACTCCT 1491 || |||| | | || | ||| ||| ||||| |||||||| || ||||| || Sbjct 18070 AAATTCATAAGTTCCGCA-TCCCATTTAAAATGGGTTTGGCCTACGGGTGAAGAGCTTTG 18012 Query 1492 GTTCCGTCAGATCAAGAAGTCGACCGACTACTGGAACTATCACGGTCAGGAATTCCCGTT 1551 ||| ||| || || || | | || |||||||| ||||| || |||||||| | Sbjct 18011 GTTTCGTGTAATGAAAAACGAGGAAAATTATTGGAACTACCACGGACAAGAATTCCCCTA 17952 Query 1552 CATTGGCTGGAACGAATTGTCGAAATACCCGACGCCCGACCTCTATGAGTCGATGATGTC 1611 ||||| ||||||||| | | ||| | || | || || || || || | |||||| Sbjct 17951 TATTGGATGGAACGAACTAACTAAACAACCCAATCCTGAACTATACGACATGGCGATGTC 17892 Query 1612 GTGTAATCGCTCGTC-TTTCCGCCCGGAGGAC-TGGCCGTAT--ATCGATGAGCACGGTA 1667 | ||||| |||| ||| || | | || ||| ||| || | | || ||| Sbjct 17891 GCTAAATCGTACGTCATTTATACCGGCATTACACAGCCCTATTAATTCAAAAACA-GGTG 17833 Query 1668 ATCAATGTC-TGCTGCCTGAAATGCCGCTCATGGTTTTTTCGACCACGAACCCGTATGGG 1726 | || | | || ||||| || || |||| || || || || || ||||| Sbjct 17832 A-AGTTGACTTAATGAGGGAAATCCCTCTTGTGGTGTTAAGCACTACTAATCCATATGGT 17774 Query 1727 CCGGGGCACAACTGGGTCAAGCGTCAGTTCATTGACATTGCACCTCCGGGGGTTGTTGTC 1786 |||||||| ||||| || | | ||||| || ||||||| ||||| ||||| Sbjct 17773 GTTGGGCACAATTGGGTGAAACAACGTTTCATCGATGTTGCACCCCCGGGAAAGGTTGTT 17714 Query 1787 AAGACGACGAAAGACGTGTTCAACCCGCGAACCCAGAAACGCGAGCCGGTCACTAAGACC 1846 | | || | || || || || || |||| || ||||| || || | || || || Sbjct 17713 ACTATAACTAGGGATGTCTTTAATCCTAGAACTCAAAAACGTGAACCAATAACAAAAACA 17654 Query 1847 CAAGTACGTCTGTTCGGCTCGTACAAGGAAAACATCTACCTGACCCCCGAATATGTGGCA 1906 || || ||| ||||||| ||||| ||||| || ||||| | || |||||| | || Sbjct 17653 CAGGTTCGTTTGTTCGGAAGTTACAAAGAAAATATTTACCTCAGTCCTGAATATATCGCT 17594 Query 1907 GAACTCGAATCGATCAAAGA 1926 ||||| ||| ||| ||||| Sbjct 17593 GAACTTGAAGGGATTAAAGA 17574 >seq5218 Length=8244 Score = 82.4 bits (90), Expect = 3e-11 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 32081 GGAGTATTCCGTATCGCAACCCGGACACTGCAAATTGCAACCAGCAAGACGAATGAAAAC 32140 || |||||| ||||| || || ||||| || || |||||||| | | ||||||||||| Sbjct 7910 GGTGTATTCGGTATCACATCCTGGACATTGTAAGTTGCAACCGCCTAAACGAATGAAAAT 7969 Query 32141 AGCAGGTCTACCCACATAGGGGCCTTCTCCCTGAATCGTGTAGAAGAT 32188 ||||||| ||| ||| |||||||| ||||| || ||| | || || Sbjct 7970 AGCAGGTTGACCACAATAAGGGCCTTCGCCCTGTATTGTGGAAAAAAT 8017 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 167484604708944