Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq572 87.8 1e-12 seq1300 86.0 5e-12 seq574 86.0 5e-12 seq24 86.0 5e-12 >seq572 Length=310010 Score = 87.8 bits (96), Expect = 1e-12 Identities = 66/75 (88%), Gaps = 2/75 (3%) Strand=Plus/Plus Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 114391 |||||||| |||||||||||||||| |||||||||||| |||||||||||||||||| Sbjct 276951 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAGGATAGTAAGATCTAAGGAACC 277010 Query 114392 AAAACTGATATATTG 114406 | ||||||| || || Sbjct 277011 ATAACTGATTTAATG 277025 Score = 87.8 bits (96), Expect = 1e-12 Identities = 66/75 (88%), Gaps = 2/75 (3%) Strand=Plus/Plus Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 115588 |||||||| |||||||||||||||| |||||||||||| |||||||||||||||||| Sbjct 276951 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAGGATAGTAAGATCTAAGGAACC 277010 Query 115589 AAAACTGATATATTG 115603 | ||||||| || || Sbjct 277011 ATAACTGATTTAATG 277025 >seq1300 Length=83366 Score = 86.0 bits (94), Expect = 5e-12 Identities = 107/144 (74%), Gaps = 2/144 (1%) Strand=Plus/Minus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 ||||| | ||| ||||| ||||| ||||| || ||||||||| |||||||| || | | Sbjct 7890 CCTCCACGCAGACGCAGAACCAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAC 7831 Query 33961 A-ATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019 | | || || | || |||| ||||| ||||| || ||||||||||| |||||| || Sbjct 7830 AGAGTGCGGC-CATCTTCCAGCTGCTTTCCGGCGAAGATCAGGCGCTGTTGATCCGGGGG 7772 Query 34020 CACGCTCTCTTTGTCCATAATTTT 34043 | | ||| |||||| ||||| Sbjct 7771 GATTCCCTCCTTGTCCTGGATTTT 7748 >seq574 Length=198552 Score = 86.0 bits (94), Expect = 5e-12 Identities = 62/69 (90%), Gaps = 2/69 (3%) Strand=Plus/Plus Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 114391 |||||||| |||||||||||||||| |||||||||||| |||||||||||||||||| Sbjct 193267 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAGGATAGTAAGATCTAAGGAACC 193326 Query 114392 AAAACTGAT 114400 | ||||||| Sbjct 193327 ATAACTGAT 193335 Score = 86.0 bits (94), Expect = 5e-12 Identities = 62/69 (90%), Gaps = 2/69 (3%) Strand=Plus/Plus Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 115588 |||||||| |||||||||||||||| |||||||||||| |||||||||||||||||| Sbjct 193267 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAGGATAGTAAGATCTAAGGAACC 193326 Query 115589 AAAACTGAT 115597 | ||||||| Sbjct 193327 ATAACTGAT 193335 >seq24 Length=941673 Score = 86.0 bits (94), Expect = 5e-12 Identities = 90/116 (78%), Gaps = 2/116 (2%) Strand=Plus/Plus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 |||||| || |||| |||||||| ||||| ||| |||||| || || |||||||| | Sbjct 528622 ACCTCCCCTGAGCCTCAGCACCAAGTGAAGAGTGGACTCCTTTTGGATATTGTAATCCGA 528681 Query 33960 CA-ATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCC 34014 | | || || | || |||| || || |||||||||||||| |||||||||||| Sbjct 528682 AAGAGTG-CGTCCATCCTCCAGCTGTTTCCCGGCAAATATCAGCCGCTGCTGATCC 528736 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396774046708774