Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq1300 147 5e-30 seq42372 96.9 8e-15 seq412 96.9 8e-15 >seq1300 Length=83366 Score = 147 bits (162), Expect = 5e-30 Identities = 147/191 (77%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||||| || ||||| || ||||| | |||||||| |||||| Sbjct 8082 TCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCATCTTCCAGCTGTTTTCCGGCGAAG 8023 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||| ||||||||| |||||||| || || ||||||||||| || ||||||||| Sbjct 8022 ATCAGGCGCTGTTGATCCGGGGGGATTCCCTCCTTGTCCTGGATTTTGGCCTTCACGTTT 7963 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || | |||||||| | ||||| ||||| || ||||| ||||||||| Sbjct 7962 TCAATGCAGTCAGATGCCTCTACTTCTAAGGTGATGGTCTTGCCAGTCAGGGTCTTGACG 7903 Query 288463 AATATCTGCAT 288473 || || ||||| Sbjct 7902 AAGATTTGCAT 7892 Score = 132 bits (146), Expect = 1e-25 Identities = 144/191 (75%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||||| || ||||| || ||||| | || ||||| |||||| Sbjct 7854 TCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCATCTTCCAGCTGCTTTCCGGCGAAG 7795 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||| ||||||||| |||||||| || || ||||||||||| || ||||||||| Sbjct 7794 ATCAGGCGCTGTTGATCCGGGGGGATTCCCTCCTTGTCCTGGATTTTGGCCTTCACGTTT 7735 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || || | |||||||| | ||||| ||||| || ||||| ||||| || Sbjct 7734 TCAATGCTGTCAGATGCCTCTACTTCCAAGGTGATGGTCTTACCAGTCAGGGTCTTTACA 7675 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 7674 AAGATCTGCAT 7664 >seq42372 Length=284 Score = 96.9 bits (106), Expect = 8e-15 Identities = 86/108 (80%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 ||||| ||||| || ||||| || || ||||| ||||| |||||||| || | ||||| Sbjct 2 ATTCCCTCTTTGTCTTGGATCTTGGCCTTCACATTTTCGATAGAATCACTTGCCTCTACC 61 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || || ||||| ||||| || || || || || ||||||||||||||| Sbjct 62 TCAAGGGTGATAGTCTTACCAGTGAGGGTTTTCACGAATATCTGCATT 109 >seq412 Length=254572 Score = 96.9 bits (106), Expect = 8e-15 Identities = 88/111 (79%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 |||||||| ||||| || ||||| || || ||||| ||||| |||||||| || | ||| Sbjct 122511 GGGATTCCCTCTTTGTCTTGGATCTTGGCCTTCACATTTTCGATAGAATCACTTGCCTCT 122570 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || || || ||||| ||||| || || || || || || |||||||||||| Sbjct 122571 ACCTCAAGGGTGATAGTCTTACCAGTGAGGGTTTTCACAAATATCTGCATT 122621 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178753782894986