Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq117 93.3 4e-14 seq7865 86.0 6e-12 >seq117 Length=549210 Score = 93.3 bits (102), Expect = 4e-14 Identities = 307/467 (66%), Gaps = 18/467 (4%) Strand=Plus/Plus Query 153672 TTGTCCACGGTAAATGCGATTGCATCCGCGGCCGGTTTAGTTCGCAAATAATACATGCCG 153731 |||||||| || || ||| || |||||| | || || |||| || ||||||||| Sbjct 312224 TTGTCCACCGTGAACTTGATCGCGCTCGCGGCGGCCTTTGTGCGCAGGTAGTACATGCCG 312283 Query 153732 GTTTTCAAACCACGTTTCCAAGTGTGCATGTGCACGCTAGTTAATAACGCGAAACTGGGC 153791 || |||| || ||||| | || | ||||| ||| || | ||| || | ||| Sbjct 312284 GTCTTCACGCCCTTCTTCCACGCGTAGAAGTGCATGCTGGTAAGCTTGGCGTAATTCGGC 312343 Query 153792 TGCGCTA--TAAACACGTTAAACGACTGGCTCTGATCGATGAAAGCGCCGCGATCGGCCG 153849 | || | | || | || | ||||| ||||| |||||||| |||||||||||||| | Sbjct 312344 TCGGCGAGGTGAATA--TTCAGTGACTGACTCTGGTCGATGAAGGCGCCGCGATCGGCAG 312401 Query 153850 CCATGTCAATCAAGTTTTTACTGC-TCATTTCCCACACAGTTTTGTAGA-CGGCTTTAAT 153907 |||||| || | | || |||| || ||||| || || ||||||| | || || | Sbjct 312402 CCATGTTGATTATCGTCTT-CTGCGAGATCTCCCAGACGGTCTTGTAGAGCTGC-TTCAG 312459 Query 153908 GTCGTCGGGTATGCGATCAATTTTCTGCACACTGCCTCCGGCCGCTATAATGGAATTGCG 153967 |||||| || || || | ||||| || ||| | || || ||| || Sbjct 312460 GTCGTCCGGGATCTCCTCGACGTTCTGAACGGAGCCGTTCTCGGCGATGATGCGGTTCTT 312519 Query 153968 CATGTGGTCGTCGTACA-----AATTTAGTCGACATAAATCTTCAACCAAGTGCTGGTTA 154022 |||||||||||| ||| | | || || | |||| | || ||| ||||| Sbjct 312520 CATGTGGTCGTCCCACAGGCCGCACTCGGT-GAGGT---CCTTC-AGCAGGTGGTGGTTG 312574 Query 154023 ATTACTTGAAAATCGCCGGCCAATACGCGGCGCACATACAAATTGCTGGTGAACGGCTCG 154082 | | || || ||||||| | ||||| ||| || | ||||| ||| ||| |||| Sbjct 312575 ACGATCTGGAACTCGCCGGAGAGCACGCGCCGCGAGTAGATGTTGCTCGTGTACGCCTCG 312634 Query 154083 AACGATTCGTTGTTGCCTAATATTTGAGCTGTAGTTGCTGTGGGCAT 154129 | ||| || |||||||| | || || || || | || || ||||| Sbjct 312635 ATCGACTCATTGTTGCCGAGGATCTGTGCCGTCGACGCGGTCGGCAT 312681 >seq7865 Length=4356 Score = 86.0 bits (94), Expect = 6e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || || |||| || || || || || |||||||| || | ||||| | ||| Sbjct 3381 AGGACCAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCACTCAGAGTGCGACCATCT 3440 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || ||||||||||| ||| | || | || |||||| || || || || || ||||| ||| Sbjct 3441 TCCAGCTGCTTGCCAGCAAAGATCAACCTCTGCTGATCCGGGGGGATGCCCTCTTTGTCT 3500 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| ||| || | | ||||| || || || || | || | ||| Sbjct 3501 TGGATCTTGGCCTTCACATTTTCAATCGAATCACTTGCCTCGACCTCAAGGGTGATGGTT 3560 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || ||||| | ||||| || || || ||||| Sbjct 3561 TTACCGGTGAGGGTTTTCACAAAGATCTGCAT 3592 Score = 86.0 bits (94), Expect = 6e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || || |||| || || || || || |||||||| || | ||||| | ||| Sbjct 3609 AGGACAAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCACTCAGAGTGCGACCATCT 3668 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || ||||||||||| ||| | || | || |||||| || || || || || ||||| ||| Sbjct 3669 TCCAGCTGCTTGCCAGCAAAGATCAACCTCTGCTGATCTGGGGGGATGCCCTCTTTGTCT 3728 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| ||| || | || ||| | || || || || | || | ||| Sbjct 3729 TGGATCTTGGCCTTCACATTTTCGATTGAATCGCTTGCCTCTACCTCAAGGGTGATGGTT 3788 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || ||||| | ||||| || || || ||||| Sbjct 3789 TTACCGGTGAGGGTTTTCACAAAGATCTGCAT 3820 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499272645816280