Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq117 367 1e-96 seq1300 105 7e-18 seq7865 89.7 5e-13 >seq117 Length=549210 Score = 367 bits (406), Expect = 1e-96 Identities = 1165/1770 (66%), Gaps = 42/1770 (2%) Strand=Plus/Plus Query 152708 CGCCGCAGGCTTTGTGCGCAAATAATACATGCCCGTTTTGAGGCCGCAGCGCCACGAGTA 152767 ||| || | ||||||||||| || |||||||| || || | ||| ||||| ||| Sbjct 312250 CGCGGCGGCCTTTGTGCGCAGGTAGTACATGCCGGTCTTCACGCCCTTCTTCCACGCGTA 312309 Query 152768 ATTGTGAATCGAAGTCATCACAGCGTACGTCGGTTGCGCCACGAACAGATTAAACGATTG 152827 ||| || || | | ||||| |||| | || | | | ||| | || || Sbjct 312310 GAAGTGCATGCTGGTAAGCTTGGCGTAATTCGGCTCGGCGAGGTGAATATTCAGTGACTG 312369 Query 152828 GCTCTGATCTATGAAAGCGTTACGGTCGGCCGCCATCTCAATCATGCGTTTTGCCTTC-- 152885 ||||| || ||||| ||| || ||||| ||||| | || || ||| || || | Sbjct 312370 ACTCTGGTCGATGAAGGCGCCGCGATCGGCAGCCATGTTGATTAT-CGTCTT--CTGCGA 312426 Query 152886 -ATCTCCCAGGCGGTTTTGTACAAATTTTTAACGCTATCCGGTATACCTTCAATGTTCTG 152944 ||||||||| |||| ||||| | | || | | ||||| || | || | |||||| Sbjct 312427 GATCTCCCAGACGGTCTTGTAGAGCTGCTTCAGGTCGTCCGGGATCTCCTCGACGTTCTG 312486 Query 152945 AATAGAGCCCTTGTGTGCAAAAATAGCGTTTCGTATTTCGGGCGTGT-ACACGTTCAGTT 153003 || ||||| || | || | || ||| ||| | | || ||| ||| | | Sbjct 312487 AACGGAGCCGTTCTCGGCGATGAT-GCGGTTCTTCATGTGGTCGTCCCACAGGCCGCACT 312545 Query 153004 TAATGAGGTCATCGATCAAGTACTGGTTGACCACTTGAAACTCGCCCGCCAACACTCGTC 153063 ||||||| | | || || |||||||| | || |||||||| | | ||| || | Sbjct 312546 CGGTGAGGTCCTTCAGCAGGTGGTGGTTGACGATCTGGAACTCGCCGGAGAGCACGCGCC 312605 Query 153064 TCAAATATACATTGCTAGTGAAAGGTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCG 153123 | | || | ||||| ||| | | || | || || || ||||| || || || |||| Sbjct 312606 GCGAGTAGATGTTGCTCGTGTACGCCTCGATCGACTCATTGTTGCCGAGGATCTGTGCCG 312665 Query 153124 TGGTTGCGGTCGGCATGTACGCCACCAACAAAGAATTCCGCAAGCCGTGCGCT-CGAATG 153182 | | ||||||||||| ||| | || || || || | |||||| || ||| Sbjct 312666 TCGACGCGGTCGGCATCGGCGCGAGCAGCAGGCTGTTGCGGACGCCGTGAGCGGCGATCT 312725 Query 153183 TCGTCCTTCAACGCCTGCCAATCCCACAGCGCCGACGGTGTCGCGTTCCACATGTCGTAC 153242 ||| |||| | ||| ||| ||||| || | | || ||| || ||||||||||||| Sbjct 312726 TCG-CCTTGAGCGCGCTCCAGTCCCAGAGGTCGGTGGGGGTCACGCCCCACATGTCGTAC 312784 Query 153243 TGTAACACTCCTCGACTGGCGGGACTGCCGGCAAACGTACTGTAGCTGCCGTCGCGT-TG 153301 || | || || ||| |||| | |||||| |||| |||| ||| || | | Sbjct 312785 TGCAGGACGCCCTTGCTGACGGGGCAGCCGGCGTACGTCTCGTAGGGGCCAA-GCTTCTC 312843 Query 153302 GGCCAGTTCGCAGCTAGCCTCGAGCGCGCCATAGTATATGGTTTCGGCGATTTGTTTATT 153361 || || |||||||| ||||| |||||||| |||||||| | ||| || || || || Sbjct 312844 CGCGAGCTCGCAGCTCGCCTCCAGCGCGCCGTAGTATATCGACTCGAATATCTGCTTGTT 312903 Query 153362 GAGAACGGCCGCTTCTTCGCTCTCGTACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAG 153421 ||| | |||| ||||||||| |||||| ||||| || | || |||||||| || Sbjct 312904 GAGCAGCTGGGCTTGCTCGCTCTCGAACGGCAAGCGCATGAGGATGAACGCGTCGGCGAG 312963 Query 153422 ACCCTGGATACCGACGCCGATGGGTCGATGCTTCTCGTTGCTGCGCCTCGCGCTCGCTAT 153481 |||||| | |||| |||||| || || || | ||| || | ||| | | | Sbjct 312964 ACCCTGAACGCCGATGCCGATCGGACGGTGGCGCATGTTCGATCGGCGCGCCTCCTCAAC 313023 Query 153482 GGGATAGTGATTGCGATCGATAATTTTGTTGAGGTTGCGCACCACCACTTTAGTTATCGC 153541 || ||| ||| ||||| || ||||||||||||||| | || || || | | Sbjct 313024 CGGGTAGAAGTTGATGTCGATGATCTTGTTGAGGTTGCGCGTGATGACCTTCGTCACGTC 313083 Query 153542 CTTAAGTTTCTCGAAATCATAGGTCATTTCGTCGACGCGTACGCATCGATTCACGGCAAT 153601 ||| || || ||| || || ||| | || || |||| ||| | || | || | Sbjct 313084 CTTCAGCTTGCGGAAGTCGTACGTCTTGTC--CG-CGCGCACGTACATGTTGAGCGCGAC 313140 Query 153602 AGACGCCAGATTACAGACGGCCGTCTCTTC-GGCGTCGCTGTACTGCACGATCTCGGCGC 153660 || || || || |||||||||||||| || |||| || ||||| ||||| || | || Sbjct 313141 CGAGGCGAGGTTGCAGACGGCCGTCTCATCGGGCGACG-AGTACTCGACGATTTCCGTGC 313199 Query 153661 AGAGGTTGCTGCATTTTATGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCACGCGT 153720 | ||||||||||| || ||| ||| | || ||||| || |||||||||||||||| Sbjct 313200 ACAGGTTGCTGCACTTAATGGTGCCGAGGTTCTGCTGGTTCGACTTGCGATTGCACGCGT 313259 Query 153721 CTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCGACGAT---AAACCTAT 153777 | ||| |||||||||| || || || || |||| ||| | ||| ||| Sbjct 313260 CCTTGTAGAGCATGTAGGGAGTTCCCGTTTCCGTCTGCGATTCCATGATGGCGTACCACA 313319 Query 153778 GCAG--GTCCTGCGCTCGCACCCGCTGCCGATAGCGGCCCTCGCTCTCGTA-TCGCTCGT 153834 || | || || | ||| || || | | ||||| | ||||| | | | || Sbjct 313320 GCTGCTGTGCTTTGATCG-TCCTTCTCACTTT----GCCCTGCTTTTCGTACTTGGT-GT 313373 Query 153835 ACAGTCGCTCAAACTCGTCGCCGTAGCAGTCGGCGAGGCCGGGACACTGATGCGGACACA 153894 | || || || |||||||| |||||||||| | ||| || || | |||||||| Sbjct 313374 AGAGAGCTTCGAATTCGTCGCCCCAGCAGTCGGCCAAGCCCGGGCATTCCGCCGGACACA 313433 Query 153895 TCAGCGACCACATATCGTCGGCGTTGACGCGTCG-CATGAACAGATCCGGCACCCAGAGC 153953 | || ||||| | | | | ||| | ||| ||||||||||||||| | ||||||| Sbjct 313434 TGAGAGACCAGTCCTGATTGAGTTCGAC-CCTCGTCATGAACAGATCCGGGATCCAGAGC 313492 Query 153954 GCGTACATGAGGTCGCGCGCCTTGC-AATCCTCCGCGCCCATGTT-GCGTTTCAGATTGA 154011 |||| | ||||| | || || || |||||| || |||| || ||| | || Sbjct 313493 CCGTAGAACAGGTCTCTCG-CTCGCTGTTCCTCCTTCCCGGTGTTCTTCTTGCAG-TCGA 313550 Query 154012 G-CACGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGGGCACCTTTACGC 154070 | || | | ||||||| |||||||| || || | ||| | || | ||| || |||| Sbjct 313551 GAAACTCGA-AGATGTCCGCGTGCCACGGCTCGAGGTACATCGCAAAGGCGCCCGGACGC 313609 Query 154071 ---TTTCCGCCCTGATCGACGTGGCGCACCATATTGTTGAAGACGCGCACCATGGGTTCC 154127 || |||||||| ||||||| | | || | || |||||||| |||| |||||| Sbjct 313610 TTGTTGCCGCCCTGGTCGACGTACCTCGCCGTGTTATTGAAGACTCGCAGCATGGGAAGG 313669 Query 154128 AGGCCGCTTGCGGTGCCGTTGGTCGAATTGATCTTGCTGCCGCGGGCGCGCACTTGATGC 154187 |||||| | | | ||||||||| ||| | ||| || |||||| | | || Sbjct 313670 AGGCCGTTCGAGCAGCCGTTGGTGCCGGCGATGTAGCTTCCCGAGGCGCGGATGTTGTGT 313729 Query 154188 ACGTTAACGCCAATGCCGCCGCCGTACTTTGATATGGCAGCGCAGTCGCCCAGCGTCCTG 154247 | ||| ||||| ||||| || || |||| |||||| ||||| || |||||| | Sbjct 313730 ATGTTGACGCCGATGCCTCCTGCGGACTTCGATATGAGCGCGCATTCCTTCAGCGTGTCG 313789 Query 154248 TAGATGCCGTCGATGCTATCGTCGCGGA-CGCCGAGCAAGAAACACGAACACATTTGCGG 154306 |||||||| |||||||| ||||| | || | |||| ||| || | | ||||| Sbjct 313790 TAGATGCCCTCGATGCTGTCGTCCTTCATCGTC-AGCAGGAAGCAGCTGGAGAGCTGCGG 313848 Query 154307 AATGCGCGTTCCCGCCGAAAAGAGGGTGGGACTCGCGTGCGTAAACAGTTTTTGGCTCAT 154366 | |||| || || ||||| || || ||||||||| ||| || | || Sbjct 313849 ACGCGGCGTGCCGGCGTTGAAGAGCGTCGGCGACGCGTGCGTGAACCACTTCTCCGACAG 313908 Query 154367 CATGCGGTACGTTTCGATGGCGTCTTCGATATCATCGCCGTGAATGCCGAGCGCGACGCG 154426 || | |||||| ||||||||| ||||| || ||| || |||| | || | Sbjct 313909 CAGGTTGTACGTCTCGATGGCGCTGTCGATGTCCCTCTGGTGGATCCCGACGGACACCCT 313968 Query 154427 CATGAGCATGTGCTGCGGACGTTCGGCGAC 154456 ||||||||| ||||| ||||| || || || Sbjct 313969 CATGAGCATCTGCTGGGGACGCTCCGCCAC 313998 >seq1300 Length=83366 Score = 105 bits (116), Expect = 7e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || |||| ||||| ||| | || | | |||||||| || |||||||||||| Sbjct 7891 GCCTCCACGCAGACGCAGAACCAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGA 7832 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 || ||| || || || || || || |||| |||| || |||||||| ||||| || Sbjct 7831 CAGAGTGCGGCCATCTTCCAGCTGCTTTCCGGCGAAGATCAGGCGCTGTTGATCCGGGGG 7772 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || || || ||||| |||||| || | | ||| | | |||| | | ||| || Sbjct 7771 GATTCCCTCCTTGTCCTGGATTTTGGCCTTCACGTTTTCAATGCTGTCAGATGCCTCTAC 7712 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || ||||||||||| || |||||||| |||||||| Sbjct 7711 TTCCAAGGTGATGGTCTTACCAGTCAGGGTCTTTACAAAGATCTGCAT 7664 Score = 82.4 bits (90), Expect = 8e-11 Identities = 137/198 (69%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| || ||| || || || || ||||| |||| Sbjct 8085 GACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCATCTTCCAGCTGTTTTCCGGCG 8026 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || |||||||| ||||| || || || || ||||| |||||| || | Sbjct 8025 AAGATCAGGCGCTGTTGATCCGGGGGGATTCCCTCCTTGTCCTGGATTTTGGCCTTCACG 7966 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | ||| | | ||| | | ||| || || | || | || || |||||||| || || Sbjct 7965 TTTTCAATGCAGTCAGATGCCTCTACTTCTAAGGTGATGGTCTTGCCAGTCAGGGTCTTG 7906 Query 138601 ACAAAAATCTGCATGGCT 138618 || || || |||||| || Sbjct 7905 ACGAAGATTTGCATGCCT 7888 >seq7865 Length=4356 Score = 89.7 bits (98), Expect = 5e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || |||| ||||| || | || | | | |||||||| || ||||||||||| || Sbjct 3593 GCCACCACGCAGACGCAGGACAAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCACT 3652 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 || ||| || || || || || || || | | |||| | | ||| || || || || Sbjct 3653 CAGAGTGCGACCATCTTCCAGCTGCTTGCCAGCAAAGATCAACCTCTGCTGATCTGGGGG 3712 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || || |||||||| ||| || || | | ||| | | ||| | | ||| || Sbjct 3713 GATGCCCTCTTTGTCTTGGATCTTGGCCTTCACATTTTCGATTGAATCGCTTGCCTCTAC 3772 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 ||| | || | |||||||| || || ||||| ||||| ||||||||| Sbjct 3773 CTCAAGGGTGATGGTTTTACCGGTGAGGGTTTTCACAAAGATCTGCATG 3821 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| ||||| || | || | | | |||||||| || ||||||||||| ||| Sbjct 3366 CCACCACGCAGACGCAGGACCAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCACTC 3425 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| || || || || || || || | | |||| | | ||| || ||||| || Sbjct 3426 AGAGTGCGACCATCTTCCAGCTGCTTGCCAGCAAAGATCAACCTCTGCTGATCCGGGGGG 3485 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || || |||||||| ||| || || | | ||| | | || | | ||| ||| Sbjct 3486 ATGCCCTCTTTGTCTTGGATCTTGGCCTTCACATTTTCAATCGAATCACTTGCCTCGACC 3545 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 || | || | |||||||| || || ||||| ||||| ||||||||| Sbjct 3546 TCAAGGGTGATGGTTTTACCGGTGAGGGTTTTCACAAAGATCTGCATG 3593 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495892765154640