Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq117 210 2e-49 seq1300 118 1e-21 >seq117 Length=549210 Score = 210 bits (232), Expect = 2e-49 Identities = 1152/1802 (64%), Gaps = 73/1802 (4%) Strand=Plus/Plus Query 145719 GTCGACGGTGAACTGCGTCGCTTGAGCGGCCGGTTTTGTGCGCAGATAGTACATGCCGGT 145778 ||| || ||||||| |||| ||||| | ||||||||||| |||||||||||||| Sbjct 312226 GTCCACCGTGAACTTGATCGCGCTCGCGGCGGCCTTTGTGCGCAGGTAGTACATGCCGGT 312285 Query 145779 CTTGAGCTGTTTCTGCCACGTGTAAAAGTGTATGCTCGACATGACCGAGTACGTGGGTTC 145838 ||| | |||| ||||| ||| ||||| ||||| | | | ||| | || || Sbjct 312286 CTTCACGCCCTTCTTCCACGCGTAGAAGTGCATGCTGGTAAGCTTGGCGTAATTCGGCTC 312345 Query 145839 GGCGACAAACAAATTTAGAGATTGGCTCTGATCAATGAAAGGAGCC-CGGTCGGCGGCCA 145897 ||||| | ||| || || || ||||| || ||| |||| ||| || ||||| |||| Sbjct 312346 GGCGAGGTGAATATTCAGTGACTGACTCTGGTCGATG-AAGGCGCCGCGATCGGCAGCCA 312404 Query 145898 TGTCTATCATGCACTTTGATTTAATTTCCCATGCGGTTTTAAAGAGATCCTTGACGTGCT 145957 ||| || || ||| || ||||| |||| || |||| | ||| | || | Sbjct 312405 TGTTGATTATCGTCTTCTGCGAGATCTCCCAGACGGTCTTGTAGAGCTGCTTCAGGTCGT 312464 Query 145958 GGGGTATTTCGTCAATGTTCTGCACAGACCCATTTTCGGCCAATATTTTGTTGCGCAATT 146017 || || || || | |||||| || || || || ||||| | || ||| || | Sbjct 312465 CCGGGATCTCCTCGACGTTCTGAACGGAGCCGTTCTCGGCGATGATGCGGTTCTTCA--T 312522 Query 146018 CTGG-AGT-GTAAATGTTCAAGTCTACGAGGGCCTTGATGAGATACTGGTTGACCACCTG 146075 ||| || | | | | || |||| |||| | || | |||||||| | ||| Sbjct 312523 GTGGTCGTCCCACAGGCCGCACTCGGTGAGGTCCTTCAGCAGGTGGTGGTTGACGATCTG 312582 Query 146076 AAACTCGCCGGCGAGAACGCGCCTCAGATACACGTTGCTGGTGAACGGCTCGAACGACTC 146135 |||||||||| ||| ||||||| | || | |||||| ||| ||| ||||| |||||| Sbjct 312583 GAACTCGCCGGAGAGCACGCGCCGCGAGTAGATGTTGCTCGTGTACGCCTCGATCGACTC 312642 Query 146136 GTTGTTACCGAGTATCTGCGCCGTCGTAGCGGTAGGCATGTACGCCACCAGCAAAGAGTT 146195 ||||| ||||| ||||| ||||||| ||||| ||||| ||| | ||||| ||| Sbjct 312643 ATTGTTGCCGAGGATCTGTGCCGTCGACGCGGTCGGCATCGGCGCGAGCAGCAGGCTGTT 312702 Query 146196 TCTCACGCCGTGTCTTTGAATCTTTTCCCGTAGTTTGGACCAATTCCACAAATGATCCGT 146255 | |||||||| ||||| || || | ||| | ||| | | || || Sbjct 312703 GCGGACGCCGTGAGCGGCGATCTTCGCCTTGAGCGCGCTCCAGTCCCAGA---GGTCGGT 312759 Query 146256 GGGATAGATATTGTAGTTGTCGTAATGCATAGTGCCGCGGAACAGGGGGCTATTCTCGTA 146315 ||| | | ||||||| |||| ||| | | ||||| |||| Sbjct 312760 GGGGGTCACGCCCCACATGTCGTACTGCAGGACGCCCTTGCTGACGGGGCAGCCGGCGTA 312819 Query 146316 CGATTCATAAGGACCGTCGATCTTGGCCAGTTCGCAGCTAGCTTCCAGAGCCGAAAAGTA 146375 || || || || || ||| || || |||||||| || ||||| || |||| Sbjct 312820 CGTCTCGTAGGGGCCAAGCTTCTCCGCGAGCTCGCAGCTCGCCTCCAGCGCGCCGTAGTA 312879 Query 146376 TATGGTCTCCGCGATCATGTAGTTGACGCTCCT-GGCCTCCTCGCTGTCGTAGGGGATAT 146434 ||| | ||| ||| | ||||| || || ||| | |||||| ||| | || | | Sbjct 312880 TATCGACTCGAATATCTGCTTGTTGA-GCAGCTGGGCTTGCTCGCTCTCGAACGGCA-AG 312937 Query 146435 CG-AGAAGCACAAAGGCGTCGGCGAGACCCTGTATCCCGACACCAACGGGGCGGTGTTTC 146493 || | || | || ||||||||||||||||| | |||| || | || ||||| | Sbjct 312938 CGCATGAGGATGAACGCGTCGGCGAGACCCTGAACGCCGATGCCGATCGGACGGTGGCGC 312997 Query 146494 TTGTTACTGTTCGCAGCGC--CCGCAGTGGGATAGTGGTTGCTGTCGATGATCTTGTTGA 146551 |||| | ||| |||| || || || ||| |||| |||||||||||||||||| Sbjct 312998 ATGTT--CGATCGGCGCGCCTCCTCAACCGGGTAGAAGTTGATGTCGATGATCTTGTTGA 313055 Query 146552 GATTACGCACGACAATTTTCGTCAAACGATTCAGCAGGACATAGTCAAATGTTTTAGTTT 146611 | || ||| || | ||||||| |||||| | |||| | || | | | Sbjct 313056 GGTTGCGCGTGATGACCTTCGTCACGTCCTTCAGCTTGCGGAAGTCGTACGTCT---TGT 313112 Query 146612 TAACGTTGACGCACTTGTTGACGGCGATAGAGGCCAAGTTACATACGGCAGTCTCGTC-C 146670 || ||| || |||||| |||| ||||| | ||| || ||||| ||||| || Sbjct 313113 CCGCGCGCACGTACATGTTGAGCGCGACCGAGGCGAGGTTGCAGACGGCCGTCTCATCGG 313172 Query 146671 TTGTCGCAATACTGCACAATCTCGGCGCAGAGGTTGCTGCACTTGATGATGCCCAAAttt 146730 | || | |||| || || || | ||| |||||||||||||| ||| |||| | || Sbjct 313173 GCGACG-AGTACTCGACGATTTCCGTGCACAGGTTGCTGCACTTAATGGTGCCGAGGTTC 313231 Query 146731 ttttGGTTACTAAACTTG---TTGCAGGGGTCCTTGTAGAGCATGTACGGTCCCCCGGTT 146787 | |||| | ||||| ||||| | |||||||||||||||||| || || ||| Sbjct 313232 TGCTGGT---TCGACTTGCGATTGCACGCGTCCTTGTAGAGCATGTAGGGAGTTCCCGTT 313288 Query 146788 TCGACATTGGTCTCGACGATGAATCTAAACAAATCT-CTGGCCTTTACTTGTCTTTCGTA 146846 || | | || | |||| | | || | || ||| |||| | ||| ||| Sbjct 313289 TCCGTCTGCGATTCCATGATG--GCGTACCACAGCTGCTGTGCTTTGATCGTCCTTC--T 313344 Query 146847 CAGTTT---ATTCTTTTCGTATTTCTCGTACAATATTTCAAA--ACTAGAACC-GTACTC 146900 || ||| | ||||||||| || ||| | ||| || | | || | | || Sbjct 313345 CACTTTGCCCTGCTTTTCGTACTTGGTGTAGAGAGCTTCGAATTCGTCGCCCCAGCAGTC 313404 Query 146901 GTCGAGGAGGCCGGGATACTTTTTG--GGACAGAACAGCGACCATTCTTTATT--CTCCT 146956 | | | || ||||| | || | ||||| | || ||||| || | ||| | | Sbjct 313405 GGCCA--AGCCCGGG---CATTCCGCCGGACACATGAGAGACCAGTCCTGATTGAGTTCG 313459 Query 146957 TCACGCGTTCCATAAACAAATCGGGAATCCAAAGGCCCAGCATCAAGTCGCGAGCCTTGG 147016 | | ||| ||| |||| ||| || ||||| || || | || ||| | | || | Sbjct 313460 ACCCTCGT--CATGAACAGATCCGGGATCCAGAGCCCGTAGAACAGGTCTCTCG-CTCGC 313516 Query 147017 CG-TCCTCGGAGCCCATGTTGCGTC-TCAAGTTGAGGACATCGTAAATTTCCGGATGCCA 147074 | ||||| || |||| | || | ||| ||| | ||| | || |||| ||||| Sbjct 313517 TGTTCCTCCTTCCCGGTGTT-CTTCTTGCAGTCGAGAAACTCGAAGATGTCCGCGTGCCA 313575 Query 147075 AGGCTCCACGTATGCGGCGAGTGCGCCTTTTCGC---TTACCGCCCTGATCGACGTGGCG 147131 ||||| | ||| || | ||||| ||| || |||||||| ||||||| | Sbjct 313576 CGGCTCGAGGTACATCGCAAAGGCGCCCGGACGCTTGTTGCCGCCCTGGTCGACGTACCT 313635 Query 147132 CACCATGTTATTGAAGACTCGTAACATGGACACGAGGCC------GCCGGATTTTGTGGT 147185 | || |||||||||||||||| | ||||| | |||||| || | || ||| Sbjct 313636 CGCCGTGTTATTGAAGACTCGCAGCATGGGAAGGAGGCCGTTCGAGCAGCCGTTGGTGCC 313695 Query 147186 GCCGTTGTA--TT---GA-GCGCTGACGCTTTGCACGCTCAGCCCGAGACCTCCGCCCAG 147239 | || |||| || || |||| || | | || | | | | |||| ||||| | Sbjct 313696 GGCGATGTAGCTTCCCGAGGCGCGGATGTTGTGTATGTTGACGCCGATGCCTCCTGCGGA 313755 Query 147240 ATTCGAAATCAAAGCGGACTCGTGCAAGGTCTTGTAGATGCCGTCGATGCTGTCTTCCTT 147299 ||||| || | ||| | || | || || | ||||||||| ||||||||||| ||||| Sbjct 313756 CTTCGATATGAGCGCGCATTCCTTCAGCGTGTCGTAGATGCCCTCGATGCTGTCGTCCTT 313815 Query 147300 GATGCATTGCAGGAAACACGAACACATTTGGGGACGACACGTGCCCGCCGCAAACAGCGT 147359 || ||||||| || | | || ||||| |||||| || || ||||| Sbjct 313816 CATCGTCAGCAGGAAGCAGCTGGAGAGCTGCGGACGCGGCGTGCCGGCGTTGAAGAGCGT 313875 Query 147360 GGGGCTGGCGTGCGTGAAC--GTGCCCAGACTCATCAATTGATACGTTTCAATGGCGCTC 147417 || |||||||||||| | | | || || || | ||||| || |||||||| Sbjct 313876 CGGCGACGCGTGCGTGAACCACTTCTCCGA--CAGCAGGTTGTACGTCTCGATGGCGCTG 313933 Query 147418 ATAACGTCATCGCCGTGAATGGCCAGGGCGACGCGCATGAGCATGTGCTGGGGTCGTTCC 147477 | ||| ||| || | | || || | ||||||||| |||||||| || ||| Sbjct 313934 TCGATGTCCCTCTGGTGGATCCCGACGGACACCCTCATGAGCATCTGCTGGGGACGCTCC 313993 Query 147478 GC 147479 || Sbjct 313994 GC 313995 >seq1300 Length=83366 Score = 118 bits (130), Expect = 1e-21 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958 |||| |||| || | |||||||| || || || ||||| ||| || ||||| | Sbjct 7878 CGCAGAACCAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCA 7819 Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || ||||| ||||| ||| |||||| ||||| ||||| || || || ||||||||| Sbjct 7818 TCTTCCAGCTGCTTTCCGGCGAAGATCAGGCGCTGTTGATCCGGGGGGATTCCCTCCTTG 7759 Query 127019 TCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACC 127078 ||| |||||| ||| | | ||| | | |||| | ||| ||||| | ||| | Sbjct 7758 TCCTGGATTTTGGCCTTCACGTTTTCAATGCTGTCAGATGCCTCTACTTCCAAGGTGATG 7699 Query 127079 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || || || ||||| || |||||||| |||||||| Sbjct 7698 GTCTTACCAGTCAGGGTCTTTACAAAGATCTGCAT 7664 Score = 111 bits (122), Expect = 1e-19 Identities = 156/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958 |||| |||| || | |||||||| || || || ||||| ||| || ||||| | Sbjct 8106 CGCAGAACCAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCA 8047 Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || ||||||||||| ||| |||||| ||||| ||||| || || || ||||||||| Sbjct 8046 TCTTCCAGCTGTTTTCCGGCGAAGATCAGGCGCTGTTGATCCGGGGGGATTCCCTCCTTG 7987 Query 127019 TCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACC 127078 ||| |||||| ||| | | ||| | | ||| | ||| ||||| | ||| | Sbjct 7986 TCCTGGATTTTGGCCTTCACGTTTTCAATGCAGTCAGATGCCTCTACTTCTAAGGTGATG 7927 Query 127079 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 127117 || ||||| ||||| || || || || || |||||| || Sbjct 7926 GTCTTGCCAGTCAGGGTCTTGACGAAGATTTGCATGCCT 7888 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475146629172880