Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_013055.1 Length=39896 Score E Sequences producing significant alignments: (Bits) Value seq26364 224 3e-54 seq33794 152 1e-32 seq16528 125 2e-24 seq38469 93.3 1e-14 >seq26364 Length=430 Score = 224 bits (248), Expect = 3e-54 Identities = 286/393 (73%), Gaps = 2/393 (1%) Strand=Plus/Plus Query 35344 CGGCGGCAAGCGGCGCCTTGCAGACCATCTCATTCCGCGCTTTCCGGCGCACGACTGCTA 35403 ||||||||||||||| || || || || || || || || ||| |||| ||| || Sbjct 1 CGGCGGCAAGCGGCGTCTGGCCGATATCCTGATCCCCCGGTTCCCGCCGCATACCTGTTA 60 Query 35404 CGTTGAAGTGTTCGCGGGCGGCGCTGCGTTGTATTTCATGCGGCCGCCGGCAAAGGTCGA 35463 ||| || || |||||||||| | ||||||| ||||| | ||||| || | ||||| Sbjct 61 CGTCGAGGTCTTCGCGGGCGCGGTAGCGTTGTTCTTCATTTGACCGCCAGCGGAAGTCGA 120 Query 35464 GGTGATCAACGACGTTAACGGCGAACTGATCAACCTGTATCGCGTCGTTCAGCATCACCT 35523 ||| | |||||||| |||| || || |||| ||||||||||| || |||||||| | Sbjct 121 AGTGCTGAACGACGTCAACGATGATCTCGTCAATCTGTATCGCGTTGTGCAGCATCATCC 180 Query 35524 CGAGGAATTCGTGCGGCAGTTCAAATGGGCGCTCACCAGTCGGCAGGTGTTCGAGTGGCT 35583 |||||| ||| | || |||||||| | ||| | | ||| ||||||| |||| |||||| Sbjct 181 CGAGGAGTTCATCCGCCAGTTCAAGTAGGCCTTGAGCAGCCGGCAGGCGTTCAGGTGGCT 240 Query 35584 GAAGCAGACGGCGCCGGAAACGCTCACCGACATCCAGCGTGCGGCGCGGTTCTACTATCT 35643 || | || |||||||||||||| || |||||||| || ||||| || || | || Sbjct 241 GAGCGACACACGACCGGAAACGCTCACGGATATCCAGCGCGCCGCGCGTTTTTA--ACCT 298 Query 35644 GCAGAAAAACTGCTTTGGCGGGATTGTCCACGGGCAGACGTTCGGCACGGCTACCACTGC 35703 ||| | |||||||| || || || || | || ||||| ||||| || || | Sbjct 299 TCAGCAGAACTGCTTCGGTGGTCGCGTGGCGGGACGTACCTTCGGGACGGCCACGACGTC 358 Query 35704 GCCGCCGGGTCTGAACTTGCTGCGGATCGAGGA 35736 ||||||||| || ||| || |||| | ||||| Sbjct 359 GCCGCCGGGGCTCAACCTGATGCGTCTGGAGGA 391 >seq33794 Length=347 Score = 152 bits (168), Expect = 1e-32 Identities = 167/222 (75%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 8827 GAAATGCGGGCCACCGAGGTCGCCGAAATATCGCGCGCACTCAAACAAATTGCGAAGGAA 8886 |||| || ||||| || | |||||||||| ||| | | ||| | | || |||||| Sbjct 263 GAAAACCGCGCCACGGAAATATCCGAAATATCACGCTCGTTAAAAGCACTGGCAAAGGAA 204 Query 8887 CTCGACGTTCCGATCATCGCGCTGTCGCAGCTTAATCGAGGGCTCGAGAATCGCCCAAAC 8946 ||| |||| ||| | || || ||||||||||| |||||| | |||| | || || | Sbjct 203 CTCAACGTACCGGTGATTGCACTGTCGCAGCTCAATCGAAGTGTCGAACAACGACCGGAT 144 Query 8947 AAGCGGCCCGTCATGTCCGATCTGCGCGAGTCGGGTGCGATCGAGCAGGATGCCGACGTG 9006 || || || |||||||| || |||| || ||||| | |||||||| || || ||||| Sbjct 143 AAACGCCCGGTCATGTCGGACTTGCGTGAATCGGGCGGTATCGAGCAAGACGCTGACGTC 84 Query 9007 ATCCTCTTTATCTACCGCGATGAGGTCTATAACCCCGACAGC 9048 ||||| |||||||||||||| || || ||||||||||| ||| Sbjct 83 ATCCTGTTTATCTACCGCGACGAAGTTTATAACCCCGAAAGC 42 >seq16528 Length=721 Score = 125 bits (138), Expect = 2e-24 Identities = 203/292 (70%), Gaps = 0/292 (0%) Strand=Plus/Minus Query 8825 CTGAAATGCGGGCCACCGAGGTCGCCGAAATATCGCGCGCACTCAAACAAATTGCGAAGG 8884 |||| | || |||| || || | ||||| || ||| |||| ||| | || || | Sbjct 721 CTGACAACCGTGCCAGTGAAATCTCAGAAATTTCACGCTCACTGAAAGGCTTGGCAAAAG 662 Query 8885 AACTCGACGTTCCGATCATCGCGCTGTCGCAGCTTAATCGAGGGCTCGAGAATCGCCCAA 8944 || | ||| || ||||| || || || ||||| |||||| | | ||| | || || | Sbjct 661 AATTAAGCGTCCCCATCATTGCCCTTTCACAGCTCAATCGAAGTTTAGAGCAACGTCCCA 602 Query 8945 ACAAGCGGCCCGTCATGTCCGATCTGCGCGAGTCGGGTGCGATCGAGCAGGATGCCGACG 9004 | || || || | ||||| ||||| || || || || || |||||||||||||| || Sbjct 601 ATAAACGCCCTATTATGTCTGATCTACGTGAATCTGGCGCAATCGAGCAGGATGCGGATA 542 Query 9005 TGATCCTCTTTATCTACCGCGATGAGGTCTATAACCCCGACAGCGCAGATCGCGGTACGG 9064 | || | || ||||| |||||||| ||||||||| ||| | || |||| || Sbjct 541 TTATTATTTTCATCTATCGCGATGAAGTCTATAACGAAGACTCTCCCGACAAAGGTATGG 482 Query 9065 CCGAAATCATCATTGCGAAGCAGCGAAACGGGCCGATTGGCACCGTACGGCT 9116 | ||| | || |||| || || ||||||| |||||||| || || ||||| Sbjct 481 CAGAAGTTATTATTGGCAAACAAAGAAACGGCCCGATTGGTACGGTGCGGCT 430 >seq38469 Length=310 Score = 93.3 bits (102), Expect = 1e-14 Identities = 99/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 8905 GCGCTGTCGCAGCTTAATCGAGGGCTCGAGAATCGCCCAAACAAGCGGCCCGTCATGTCC 8964 || ||||| ||||| ||||| ||||| | |||| | |||| || ||| | |||||| Sbjct 216 GCACTGTCACAGCTAAATCGTTCTCTCGAAAGTCGCACCGACAAACGTCCCATGATGTCC 157 Query 8965 GATCTGCGCGAGTCGGGTGCGATCGAGCAGGATGCCGACGTGATCCTCTTTATCTACCGC 9024 || ||||| || ||||| || ||||||||||| ||||| || ||| | ||| | || || Sbjct 156 GACCTGCGAGAATCGGGAGCCATCGAGCAGGACGCCGATGTCATCATGTTTGTGTATCGG 97 Query 9025 GATGAGGTCTA 9035 || | |||||| Sbjct 96 GAGGCGGTCTA 86 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127455349291452