Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq117 168 8e-37 seq31350 86.0 8e-12 seq21966 84.2 3e-11 seq99 84.2 3e-11 >seq117 Length=549210 Score = 168 bits (186), Expect = 8e-37 Identities = 1067/1691 (63%), Gaps = 60/1691 (4%) Strand=Plus/Plus Query 115526 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 115585 |||||| || | ||||| |||||||| || ||||||||||| || ||||| | | Sbjct 312234 TGAACTTGATCGCGCTCGCGGCGGCCTTTGTGCGCAGGTAGTACATGCCGGTCTTCACGC 312293 Query 115586 CCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGTGTTGGACTTTCCATGA 115645 ||| |||||| || || | ||||| || | ||||| | | || || | Sbjct 312294 CCTTCTTCCACGCGTAGAAGTGCATGCTGGTAAGCTTGGCGTAATTCGGC---TC---GG 312347 Query 115646 AGAGGTTCATACTTTGGGATTGA------TCGATGAAGCGTCCCCGATCCGCCGCCATAT 115699 ||||| ||| | | || ||| ||||||||| || ||||| || ||||| | Sbjct 312348 CGAGGTGAATATTCAGTGACTGACTCTGGTCGATGAAGGCGCCGCGATCGGCAGCCATGT 312407 Query 115700 CAATCACATCCTTCATCTTGATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTG 115759 || | |||| | ||| ||||| || || ||||||| | ||| | || || | Sbjct 312408 TGATTATCGTCTTCTGCGAGATCTCCCAGACGGTCTTGTAGAGCTGCTTCAGGTCGTCCG 312467 Query 115760 GGATATCCACGATATTTTGGATAGAGCCACCTGCCTTGACCATGAGATCCTTCATATCCT 115819 |||| ||| ||| || || | ||||| | || ||| | | |||||| | | Sbjct 312468 GGATCTCCTCGACGTTCTGAACGGAGCCGTTCTCGGCGATGATGCGGTTCTTCATGTGGT 312527 Query 115820 TTGACCAGAGACCAATCTTCTTGAGATCCTCCACGAGGTGCTTATTGACAACAACAAACT 115879 ||| || || || |||| |||| || ||||| | ||||| | |||| Sbjct 312528 CGTCCCACAGGCCGCACTCGGTGAGGTCCTTCAGCAGGTGGTGGTTGACGATCTGGAACT 312587 Query 115880 CACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGT 115939 | || | ||| ||| | | ||||||||| ||||||| | ||| | ||||||||| Sbjct 312588 CGCCGGAGAGCACGCGCCGCGAGTAGATGTTGCTCGTGTACGCCTCGATCGACTCATTGT 312647 Query 115940 TACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGA 115999 | || | ||| || || || || || || ||||| || || | || ||||||||||||| Sbjct 312648 TGCCGAGGATCTGTGCCGTCGACGCGGTCGGCATCGGCGCGAGCAGCAGGCTGTTGCGGA 312707 Query 116000 GACCC--ACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGA-GCTTTGTCT 116056 || | | | | || ||||||| ||| |||||| || | | | | | Sbjct 312708 CGCCGTGAGCGGCGATCTTCG--CCTTGAGCGCGCTCCAGTCCCAGAGGTCGGTGGGGGT 312765 Query 116057 CCCCCTCCCACATATCAAACTGGAGGATACCTTGG--GACGCTGGCGATCCCTCAAATGT 116114 | | | ||||||| || |||| |||| || | | |||| ||| | || | | || Sbjct 312766 CACGC-CCCACATGTCGTACTGCAGGACGCCCTTGCTGACGG-GGC-AGCCGGCGTACGT 312822 Query 116115 CTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACAT 116174 ||| || ||||| |||||| | ||| |||||||||| || || ||| || || Sbjct 312823 CTCGTAGGGGCCAAGCTTCTCCGCGAGCTCGCAGCTCGCCTCCAGCGCGCCGTAGTATAT 312882 Query 116175 TGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCA 116234 | ||| || || | || | || ||| | ||| || |||| | || Sbjct 312883 CGACTCGAATATCTGCTTGTTGAGCAGCTGGGCTTGCTCGCTCTCGAACGGCAAGCGCAT 312942 Query 116235 CAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATT 116294 | || || | || |||||||| || || |||| ||| || || || || | ||| || Sbjct 312943 GAGGATGAACGCGTCGGCGAGACCCTGAACGCCGATGCCGATCGGACGGTGGCGCATGTT 313002 Query 116295 AGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTT 116354 || || || ||| || || || || || | ||||| | | | || || || Sbjct 313003 CGATCGGCGCGCCTCCTCAACCGGGTAGAAGTTGATGTCGATGATCTTGTTGAGGTTGCG 313062 Query 116355 GGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATT 116414 |||| ||||| || | || | ||||| | | || | |||| || Sbjct 313063 CGTGATGACCTTCGTCACGTCCTTCAGCTTGCGGAAGTCGTAC------GTCTTGTCCGC 313116 Query 116415 G---ACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATC 116471 | || ||| | || |||| || || || || || || | |||||||| Sbjct 313117 GCGCACGTACATGTTGAGCGCGACCGAGGCGAGGTTGCAGACGGCCGTCTCATCGGGCGA 313176 Query 116472 AGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTG 116531 | |||||| | |||||||| |||| || | |||||||||||| | ||||| || Sbjct 313177 CGAGTACTCGACGATTTCCGTGCACAGGTTGCTGCACTTAATGGTGCCGAGGTTCTGCTG 313236 Query 116532 ATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTG 116591 || ||||| || ||||| |||||||||||||| || || || ||||| ||||| || Sbjct 313237 GTTCGACTTGCGATTGCACGCGTCCTTGTAGAGCATGTAGGGAGTTCCCGTTTCCGTCTG 313296 Query 116592 GGACTTGAGAATAGCCTTCCATACATCGGC--GGCTGGCACAGTGGCGTTGGCTCGC--- 116646 || | | || || | || ||| | || ||| | || | || ||| | Sbjct 313297 CGATTCCATGATGGCGTACC--ACAGCTGCTGTGCTTTGATCGT--CCTT--CTCACTTT 313350 Query 116647 -CCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGC-CTCTGAGA 116704 |||| || |||||||| |||||||| || || || || || ||| |||| || | | Sbjct 313351 GCCCTGCTTTTCGTACTTGGTGTAGAGAGCTTCGAATTCGTCGCCC-CAGCAGTCGGCCA 313409 Query 116705 GCCCTGGTGCCTT-ATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTC 116763 || || || || | ||||| | ||||||||| | | || |||| | || Sbjct 313410 AGCCCGG-GCATTCCGCCGGACACATGAGAGACCAGTCCTGATTGAGTTCGACCCTCGTC 313468 Query 116764 ATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCG-AGCTTCTTCATC 116822 ||||| || || |||||||||||| | |||| || || | || | | || | || Sbjct 313469 ATGAACAGATCCGGGATCCAGAGCCCGTAGAACAGGTCTCTCGCTCGCTGTTCCTCCTTC 313528 Query 116823 CCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTA 116882 || || | || | || | ||| || | ||| |||||||||||||| || ||||| Sbjct 313529 CCGGTGTTCTTCTTGC-AGTCGAGAAACTCGAAGATGTCCGCGTGCCACGGCTCGAGGTA 313587 Query 116883 CACCGCGATTGACCCCTTGCGACG------ACCAGCCTGGTTTACATACCTCGCCGTTGC 116936 || ||| | | ||| |||| || |||||| || ||||||||||| Sbjct 313588 CATCGCAAAGGCGCCC---GGACGCTTGTTGCCGCCCTGGTCGACGTACCTCGCCGTGTT 313644 Query 116937 GTTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGT-CCCCCGAATAC 116995 || || || || ||||| |||| || || | || ||| || || || ||| Sbjct 313645 ATTGAAGACTCGCAGCATGGGAAGGAGGCCGTTCGAGCAGCCGTTGGTGCCGGCGATGTA 313704 Query 116996 GAGACTTGTTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGA 117055 | | | ||| | || | ||| |||| | || || || ||||| |||| || | Sbjct 313705 GCTTCCCG-AGGCGCGGATGTTGTGTATGTTGACGCCGATGCCTCCTGCGGACTTCGATA 313763 Query 117056 TTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGA 117115 | | ||||| ||| | || || ||||||| || ||||| ||| |||| | | | Sbjct 313764 TGAGCGCGCATTCCTTCAGCGTGTCGTAGATGCCCTCGATGCTGTCGTCCTTCATCGTCA 313823 Query 117116 TGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCG 117175 ||||||||||| || | || || | || || || ||||||||||| || || | || Sbjct 313824 GCAGGAAGCAGCTGGAGAGCTGCGGACGCGGCGTGCCGGCGTTGAAGAGCGTCGGCGACG 313883 Query 117176 CGTGGATGAAC 117186 |||| ||||| Sbjct 313884 CGTGCGTGAAC 313894 >seq31350 Length=370 Score = 86.0 bits (94), Expect = 8e-12 Identities = 144/208 (69%), Gaps = 18/208 (9%) Strand=Plus/Plus Query 12789 TCGAAGCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCACGTTCATCATTCGCG 12848 || || |||||||| ||| | | |||||| | ||||||||||| |||||||| | Sbjct 75 TCAAAACCATCCATTTCAACGAGCAATTGATTAAGCGTTTGTTCACGCTCATCATTACC- 133 Query 12849 GGCATACCACCC------GCACTGCGTTGCTTACCGACGGCGTCAATTTCGTCAATGAAA 12902 ||||||| || | ||||| ||| || || || ||||| ||||| ||| Sbjct 134 -----ACCACCCATTCCTGCGCCACGTTGGCGACCAACCGCATCGATTTCATCAATAAAA 188 Query 12903 ACGATACACGG---TTGATTTTCACGGGCAACTTCAAAGATATCTCGCACTCTCTTGGCA 12959 | ||| || || ||| |||| || ||||| || ||||||||||| || Sbjct 189 ATGATGCAAGGCGCTTGCTTTTTT---GCTTGCTCAAACATGTCTCGCACTCTAGACGCG 245 Query 12960 CCGACACCCACAAACATCTCCACAAAAT 12987 ||||||||||||||||| || ||||||| Sbjct 246 CCGACACCCACAAACATTTCAACAAAAT 273 >seq21966 Length=511 Score = 84.2 bits (92), Expect = 3e-11 Identities = 246/370 (66%), Gaps = 12/370 (3%) Strand=Plus/Minus Query 12546 TCATTGAGGAGGTTCGCCAAGTCGGCACCAGAGAAGCCCGTCGTTTGCTT--TGCGATGG 12603 ||||||| ||||| || | |||||||||||| || || | || ||| ||| | | Sbjct 364 TCATTGACAAGGTTTGCAAGGTCGGCACCAGAAAAACCGG--GTGTGCCGCGTGCCA-GT 308 Query 12604 CGTGTAG-CTTCACATCGTCAGCCAACTTCTTGTCTCGGGCGTGGACACCCAAAATCTTC 12662 | | || ||| ||||| || | ||| | | || ||| ||| | ||| ||| Sbjct 307 AGCGAAGGCTTAACATCATCCCCTAACGGCACTTTGCGCATGTGAACAATGAGAATTTTC 248 Query 12663 TCGCGTCCGCGCACACTGGGTAGGGACACGGTGATCTTACGATCAAAGCGACCTGGGCGG 12722 || || || || ||| || || | ||| ||| || ||| ||||| || || || || Sbjct 247 TCACGACCACGAACATCAGGCAGCGGCACAATGACCTGACGGTCAAAACGCCCAGGTCGC 188 Query 12723 AGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGCCGCGATGACAACGATGCCCGTC 12782 | || ||| ||||| | |||| |||||| || || || ||||| | | ||| || Sbjct 187 AATAGAGCGGGATCAAGTACATCAGGGCGGTTGGTTGCAGCAATGACGATAACGCCT-TC 129 Query 12783 TC-GTTATCGAAGCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCACGTTCATC 12841 | | || ||||| ||||| ||| || | || || | ||||| ||||||||||| Sbjct 128 TGTGCCTTCAAAGCCGTCCATTTCAACTAATAACTGGTTTAATGTTTGCTCACGTTCATC 69 Query 12842 ATTCGCGGGCATACCA--CCCGCACTGCGTTGCTTACCGACGGCGTCAATTTCGTCAATG 12899 || || | | ||| || |||| ||| | ||| ||||| ||||||||||| ||| Sbjct 68 GTTACCG--CCTCCCATACCTGCACCGCGACGGCGACCAACGGCATCAATTTCGTCGATG 11 Query 12900 AAAACGATAC 12909 || | |||| Sbjct 10 AAGATAATAC 1 >seq99 Length=602874 Score = 84.2 bits (92), Expect = 3e-11 Identities = 93/124 (75%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 127552 GATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTCTTCAACCAGAAAAT 127611 |||||| ||||| |||| |||||| ||||| | || || || |||| |||||| || Sbjct 457850 GATGAGCTCATTGCTGAAGGTCAGACCAGGCATCAAGCCACGTTTTTTCAGCCAGAATAT 457909 Query 127612 CGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAACGCAAATAGACGCTC 127671 ||| |||||| || ||||||||||| ||||| ||| || ||| || | || ||||| Sbjct 457910 AGCAGCAAATGACCCTGAGAAGAAGATTCCCTCGACAGCCGAGAAAGCCACCAGTCGCTC 457969 Query 127672 GGCA 127675 ||| Sbjct 457970 AGCA 457973 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613050236830920