Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq117 273 3e-68 >seq117 Length=549210 Score = 273 bits (302), Expect = 3e-68 Identities = 429/606 (71%), Gaps = 10/606 (2%) Strand=Plus/Plus Query 203839 CTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGCC 203898 ||||||||||||||||| || ||| || |||| | | | | | ||| ||||||||||| Sbjct 312223 CTTGTCCACCGTGAACTTGATCGCGCTCGCGGCGGCCTTTGTGCGCAGGTAGTACATGCC 312282 Query 203899 GGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGG 203958 |||||| | |||||||| |||| |||| | ||||||| | || ||| || || Sbjct 312283 GGTCTTCACGCCCTTCTTCCACGCGTAGAAGTGCATGCTGGTAAGCTTGGCGTAATTCGG 312342 Query 203959 GTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGG 204017 ||||| | |||||| ||||| ||||| || ||||||||| |||||||| ||||| || | Sbjct 312343 CTCGGCGAGGTGAATATTCAGTGACTGACTCTGGTCGATG-AAGGCGCCGCGATCGGCAG 312401 Query 204018 CCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACA--CGTCTCTGGT 204075 |||| ||||| || ||||||||||| |||||||| || |||||| | | | || ||| Sbjct 312402 CCATGTTGATTATCGTCTTCTGCGAGATCTCCCAGACGGTCTTGTAGAGCTGCTTCAGGT 312461 Query 204076 GTGTTGAGGCACATCTTC-CCACGTCCTGATC-GAGCCGTTGTCGGCCATCAGTCTCATC 204133 || || |||| | | |||| |||| | |||||||| ||||| || | | || Sbjct 312462 -CGTCCGGG---ATCTCCTCGACGTTCTGAACGGAGCCGTTCTCGGCGATGATGCGGTTC 312517 Query 204134 CTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATG 204193 || | | || |||||| ||| || | | || ||| || ||||||| |||||| | Sbjct 312518 TTCATGTGGTCGTCCCACAGGCCGCACTCGGTGAGGTCCTTCAGCAGGTGGTGGTTGACG 312577 Query 204194 ATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAAC 204253 ||||| || || ||||| ||||| | || | | | | |||| | ||| | | |||| | Sbjct 312578 ATCTGGAACTCGCCGGAGAGCACGCGCCGCGAGTAGATGTTGCTCGTGTACGCCTCGATC 312637 Query 204254 GCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGG 204313 | ||| |||||||||| ||||| || || || || ||||| || || || |||||| Sbjct 312638 GACTCATTGTTGCCGAGGATCTGTGCCGTCGACGCGGTCGGCATCGGCGCGAGCAGCAGG 312697 Query 204314 GAGTTGCGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGTCCAGTCGTGCATCGCA 204373 |||||| || |||| || | | ||| || | | ||||||| | | Sbjct 312698 CTGTTGCGGACGCCGTGAGCGGCGATCTTCGCCTTGAGCGCGCTCCAGTCCCAGAGGTCG 312757 Query 204374 CTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCTGCCCTTG 204433 |||| ||||||||||||||||| |||| | || ||| | ||||| |||| ||| | Sbjct 312758 GTGGGGGTCACGCCCCACATGTCGTACTGCAGGACGCCCTTGCTGACGGGGCAGCCGGCG 312817 Query 204434 TACGTC 204439 |||||| Sbjct 312818 TACGTC 312823 Score = 123 bits (136), Expect = 4e-23 Identities = 472/729 (65%), Gaps = 18/729 (2%) Strand=Plus/Plus Query 204883 CTCCACGATCTCGGTGCACAAGTTACCGCACTTCACCACCCCCACATGCTGCTGGTTAGA 204942 ||| ||||| || ||||||| ||| | |||||| | || | | ||||||||| || Sbjct 313183 CTCGACGATTTCCGTGCACAGGTTGCTGCACTTAATGGTGCCGAGGTTCTGCTGGTTCGA 313242 Query 204943 CTTGCGGTTACAGGAGTCCTTGTACATCATGAACGGCATTCCGTTCTCCATCTGAGATCG 205002 |||||| || || | ||||||||| | |||| | || |||| | ||| |||| ||| Sbjct 313243 CTTGCGATTGCACGCGTCCTTGTAGAGCATGTAGGGAGTTCCCGTTTCCGTCTGCGATTC 313302 Query 205003 CAGAATGTGGGTCCACAATTCGCGAGCCTCCA-CTTGCTTCACGTACATC-CCTTGAGAC 205060 || ||| | ||||| | | || | | | | |||| | || | || || Sbjct 313303 CATGATGGCGTACCACAGCTGCTGTGCTTTGATCGTCCTTCTC--ACTTTGCCCTGCTTT 313360 Query 205061 TCGTATTTTGTGTACAGCGCCACAAAGTCAGAACCGTA-CA--CGTCCATCAGCCCTGGA 205117 ||||| || ||||| || || | || || || | || || ||| ||||| || Sbjct 313361 TCGTACTTGGTGTAGAGAGCTTCGAATTCGTCGCCCCAGCAGTCGGCCA--AGCCCGGG- 313417 Query 205118 CATTTTTTGGGACACATCAGAGACCACATCTGATCGTCTTTCACCCTCTCCATAAACAGG 205177 |||| |||||||| |||||||| ||||| | || |||||| ||| ||||| Sbjct 313418 CATTCCGCCGGACACATGAGAGACCAGTCCTGATTGAGTTCGACCCTCGTCATGAACAGA 313477 Query 205178 TCGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTCGTCTCCAAGGTTC 205237 || |||||| || ||||| ||||| || | || | | | || | || |||| Sbjct 313478 TCCGGGATCCAGAGCCCGTAGAACAGGTCTCTCGCTCGCTGTTCCTCCTTCCCGGTGTTC 313537 Query 205238 TTTTTCAAGTCCAGCCAAGCCGCA-ATGTCGGCGTGCCACGGCTCTAACCACACGGCCAT 205296 || || |||| || || || | ||||| |||||||||||||| | ||| || | Sbjct 313538 TTCTTGCAGTCGAGA-AACTCGAAGATGTCCGCGTGCCACGGCTCGAGGTACATCGCAAA 313596 Query 205297 TGCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCGCGTTGAAAACTCG 205356 ||||| || | |||||| || |||||||| || | | | | ||||| ||||| Sbjct 313597 GGCGCCCGGACGCTTGTTGCCGCCCTGGTCGACGTACCTCGCCGTGTTATTGAAGACTCG 313656 Query 205357 CAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTGATGGCCGAGCCTTC--- 205413 |||||| || | || ||||| | | ||||| |||| | |||| ||| | | Sbjct 313657 CAGCATGGGAAGGAGGCCGTTCGAGCAGCCGTTGGTGCCGGCGATG---TAGCTTCCCGA 313713 Query 205414 AGCCCTCACGTTGGAGATGGCCGCGCCAATCCCGCCAGAACACTTGGCGATCTGGGCGCA 205473 || | | |||| ||| |||| || || || | |||| | || | ||||| Sbjct 313714 GGCGCGGATGTTGTGTATGTTGACGCCGATGCCTCCTGCGGACTTCGATATGAGCGCGCA 313773 Query 205474 CTCTTGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCCGCCAGTGTCACCAGATAGCA 205533 || | ||| ||| ||||||||| ||||| |||||| || |||| ||| |||| Sbjct 313774 TTCCTTCAGCGTGTCGTAGATGCCCTCGATGCTGTCGTCCTTCATCGTCAGCAGGAAGCA 313833 Query 205534 CGAAGCCAGCTTGGCAAAGTTGGTGCCCGCGTGGAAGAGCGTGGGGCTGGCGTGGCTGAA 205593 | |||| | | ||||| |||| ||||||||| || ||||| |||| Sbjct 313834 GCTGGAGAGCTGCGGACGCGGCGTGCCGGCGTTGAAGAGCGTCGGCGACGCGTGCGTGAA 313893 Query 205594 GCGCTTCTC 205602 | |||||| Sbjct 313894 CCACTTCTC 313902 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 794562938588720