Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq1300 159 8e-34 seq7865 132 1e-25 seq24 98.7 2e-15 >seq1300 Length=83366 Score = 159 bits (176), Expect = 8e-34 Identities = 166/218 (76%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | ||| || ||||| ||||| |||||||| |||| ||||||||| | || ||| Sbjct 7884 CGCAGACGCAGAACCAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGACAGAGTG 7825 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||||||||||||||||||||||||||| || ||||| || ||||| ||||| Sbjct 7824 CGGCCATCTTCCAGCTGCTTTCCGGCGAAGATCAGGCGCTGTTGATCCGGGGGGATTCCC 7765 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| || || ||||||| ||| | | |||| | || ||||| ||||| Sbjct 7764 TCCTTGTCCTGGATTTTGGCCTTCACGTTTTCAATGCTGTCAGATGCCTCTACTTCCAAG 7705 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| |||||||| || || || || ||||| || || Sbjct 7704 GTGATGGTCTTACCAGTCAGGGTCTTTACAAAGATCTG 7667 Score = 140 bits (154), Expect = 8e-28 Identities = 157/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 ||| || ||||| ||||| |||||||| |||| ||||||||| | || ||| | ||||| Sbjct 8104 CAGAACCAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCATC 8045 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 ||||||||| |||||||||||||| || ||||| || ||||| ||||| || || Sbjct 8044 TTCCAGCTGTTTTCCGGCGAAGATCAGGCGCTGTTGATCCGGGGGGATTCCCTCCTTGTC 7985 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 ||| || || ||||||| ||| | | ||| | || ||||| || || ||||| || Sbjct 7984 CTGGATTTTGGCCTTCACGTTTTCAATGCAGTCAGATGCCTCTACTTCTAAGGTGATGGT 7925 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||| || || || || || || || ||||| Sbjct 7924 CTTGCCAGTCAGGGTCTTGACGAAGATTTG 7895 Score = 104 bits (114), Expect = 6e-17 Identities = 80/95 (84%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 200935 CTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAG 200994 || |||||||||||||||||| |||||||||| | ||| || |||| |||||| ||||| Sbjct 7790 CTGATCTTCGCCGGAAAGCAGCTGGAAGATGGCCGCACTCTGTCCGACTACAACATCCAG 7849 Query 200995 AAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 201029 || ||||||||||||||||| ||| || | || || Sbjct 7850 AAGGAGTCTACTCTTCACCTGGTTCTGCGTCTGCG 7884 Score = 98.7 bits (108), Expect = 2e-15 Identities = 74/87 (85%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 200935 CTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAG 200994 || |||||||||||||| ||| |||||||||| | ||| || |||| |||||| ||||| Sbjct 8018 CTGATCTTCGCCGGAAAACAGCTGGAAGATGGCCGCACTCTGTCCGACTACAACATCCAG 8077 Query 200995 AAAGAGTCTACTCTTCACCTTGTTTTG 201021 || ||||||||||||||||| ||| || Sbjct 8078 AAGGAGTCTACTCTTCACCTGGTTCTG 8104 >seq7865 Length=4356 Score = 132 bits (146), Expect = 1e-25 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | |||||||||||| || || |||||||| |||| |||||||||| || ||| Sbjct 3600 CGCAGACGCAGGACAAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCACTCAGAGTG 3659 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||||||||||||||| || || ||||| | | |||||| || || || || Sbjct 3660 CGACCATCTTCCAGCTGCTTGCCAGCAAAGATCAACCTCTGCTGATCTGGGGGGATGCCC 3719 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 ||| || || ||||| |||||| ||||| | || ||| ||||| || | Sbjct 3720 TCTTTGTCTTGGATCTTGGCCTTCACATTTTCGATTGAATCGCTTGCCTCTACCTCAAGG 3779 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| || ||||| ||||| ||||||||||| || || Sbjct 3780 GTGATGGTTTTACCGGTGAGGGTTTTCACAAAGATCTG 3817 Score = 123 bits (136), Expect = 6e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | |||||| ||||| || || |||||||| |||| |||||||||| || ||| Sbjct 3372 CGCAGACGCAGGACCAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCACTCAGAGTG 3431 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||||||||||||||| || || ||||| | | |||||| ||||| || || Sbjct 3432 CGACCATCTTCCAGCTGCTTGCCAGCAAAGATCAACCTCTGCTGATCCGGGGGGATGCCC 3491 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 ||| || || ||||| |||||| ||| | | || ||| || || || | Sbjct 3492 TCTTTGTCTTGGATCTTGGCCTTCACATTTTCAATCGAATCACTTGCCTCGACCTCAAGG 3551 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| || ||||| ||||| ||||||||||| || || Sbjct 3552 GTGATGGTTTTACCGGTGAGGGTTTTCACAAAGATCTG 3589 Score = 95.1 bits (104), Expect = 3e-14 Identities = 87/110 (79%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | |||||| ||||| || || |||||||| |||| |||||||||| || ||| Sbjct 3828 CGCAGACGCAGGACCAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCACTCAGAGTG 3887 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 | ||||||||||||||||| || || ||||| | | |||||| ||||| Sbjct 3888 CGACCATCTTCCAGCTGCTTGCCAGCAAAGATCAACCTCTGCTGATCCGG 3937 >seq24 Length=941673 Score = 98.7 bits (108), Expect = 2e-15 Identities = 92/117 (79%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471 || ||||| || | ||| ||||| ||||||||||||| ||||| || | | ||| | | Sbjct 528632 AGCCTCAGCACCAAGTGAAGAGTGGACTCCTTTTGGATATTGTAATCCGAAAGAGTGCGT 528691 Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 ||||| |||||||| || ||||| || || || |||||||| |||||| ||||||| Sbjct 528692 CCATCCTCCAGCTGTTTCCCGGCAAATATCAGCCGCTGCTGATCCGGAGGAATTCCT 528748 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178021542357329