Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq1300 127 2e-24 seq7865 107 2e-18 >seq1300 Length=83366 Score = 127 bits (140), Expect = 2e-24 Identities = 170/234 (73%), Gaps = 2/234 (1%) Strand=Plus/Minus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 ||||||| | | ||||| ||||| || | ||| |||||| ||||| |||||||||| Sbjct 7892 TGCCTCCACGCAGACGCAGAACCAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGG 7833 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | |||||||| | || || |||||||| |||||||| |||| |||||| || || | | Sbjct 7832 ACAGAGTGCGGCCATCTTCCAGCTGCTTTCCGGCGAAGATCAGGCGCTGTTGATCCGGGG 7773 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCG-TGTCGCTCGATTCC 46543 | | | |||||||||| ||| || ||| | ||| || | |||| | || Sbjct 7772 GGATTCCCTCCTTGTCCTGGATTTTGGCCTTCA-CGTTTTCAATGCTGTCAGATGCCTCT 7714 Query 46544 ACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTG 46597 || |||| |||||||| || || ||||| || || |||||||| ||||| ||| Sbjct 7713 ACTTCCAAGGTGATGGTCTTACCAGTCAGGGTCTTTACAAAGATCTGCATATTG 7660 Score = 109 bits (120), Expect = 6e-19 Identities = 156/217 (72%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||||| ||||| || | ||| |||||| ||||| ||||||||||| |||||||| | Sbjct 8107 ACGCAGAACCAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCC 8048 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || || ||||| || |||||||| |||| |||||| || || | || | | |||||| Sbjct 8047 ATCTTCCAGCTGTTTTCCGGCGAAGATCAGGCGCTGTTGATCCGGGGGGATTCCCTCCTT 7988 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCG-TGTCGCTCGATTCCACATCCACCGTGA 46556 |||| ||| || ||| | ||| || | ||| | || || || | |||| Sbjct 7987 GTCCTGGATTTTGGCCTTCA-CGTTTTCAATGCAGTCAGATGCCTCTACTTCTAAGGTGA 7929 Query 46557 TGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||| ||||| ||||| || || || ||||||||||| Sbjct 7928 TGGTCTTGCCAGTCAGGGTCTTGACGAAGATTTGCAT 7892 >seq7865 Length=4356 Score = 107 bits (118), Expect = 2e-18 Identities = 166/237 (70%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 46357 ATATTATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATT 46416 || ||| || || || | | ||||| ||||| || | ||| |||||| ||||| || Sbjct 3356 ATTTTAGTTTCCACCACGCAGACGCAGGACCAGGTGAAGGGTAGACTCCTTCTGGATGTT 3415 Query 46417 GTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTG 46476 |||||| |||||||| | || || ||||||||||| || || ||||| | |||||| Sbjct 3416 GTAGTCACTCAGAGTGCGACCATCTTCCAGCTGCTTGCCAGCAAAGATCAACCTCTGCTG 3475 Query 46477 GTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCT 46536 || | || | || ||| ||||| |||||| ||| | | | | || || || Sbjct 3476 ATCCGGGGGGATGCCCTCTTTGTCTTGGATCTTGGCCTTCACATTTTCAATCGAATCACT 3535 Query 46537 CGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | || || || | ||||||||||| || || || ||||| |||||||| ||||| Sbjct 3536 TGCCTCGACCTCAAGGGTGATGGTTTTACCGGTGAGGGTTTTCACAAAGATCTGCAT 3592 Score = 102 bits (112), Expect = 9e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| || | | ||||| || || || | ||| |||||| ||||| |||||||| Sbjct 3592 TGCCACCACGCAGACGCAGGACAAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAC 3651 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 |||||||| | || || ||||||||||| || || ||||| | |||||| || | | Sbjct 3652 TCAGAGTGCGACCATCTTCCAGCTGCTTGCCAGCAAAGATCAACCTCTGCTGATCTGGGG 3711 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544 | | || ||| ||||| |||||| ||| | | | | | ||||| | || | Sbjct 3712 GGATGCCCTCTTTGTCTTGGATCTTGGCCTTCACATTTTCGATTGAATCGCTTGCCTCTA 3771 Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | || | ||||||||||| || || || ||||| |||||||| ||||| Sbjct 3772 CCTCAAGGGTGATGGTTTTACCGGTGAGGGTTTTCACAAAGATCTGCAT 3820 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 564817389243240