Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq41789 113 3e-19 seq2490 109 4e-18 seq37146 89.7 4e-12 seq512 87.8 1e-11 >seq41789 Length=288 Score = 113 bits (124), Expect = 3e-19 Identities = 171/243 (70%), Gaps = 3/243 (1%) Strand=Plus/Minus Query 518026 ATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCC 518085 ||||||||| || || || |||| | || ||||||| || | | |||| || ||| Sbjct 245 ATCAAAATCATCTCCACCTAATTCATTAATTCCTGATGTTGATAAAACTTCAAATGTTCC 186 Query 518086 ATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTAC 518145 || | | | | | | | |||||| ||||| ||||| | ||| ||| | ||| Sbjct 185 ATTTGCTAAATCTAGGATTGAAACATCAAATGTTCCTCCACCTAAATCGTAAACCAATAC 126 Query 518146 ATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTC 518205 || |||||| |||| ||||||||| |||| | || ||||| ||||| |||||||| Sbjct 125 TTTTTGTTCTTTATCTT---TTTTATCAATACCAAATGCTAAAGCTGCAGCTGTTGGTTC 69 Query 518206 ATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCT 518265 |||||||||||| ||| | | ||| || ||| | ||||||| ||| || || | ||| Sbjct 68 ATTAATAATTCTTTCAACTTCTAAACCTGCTATTTTACCTGCATTTTTTGTTGCATTTCT 9 Query 518266 TTG 518268 ||| Sbjct 8 TTG 6 >seq2490 Length=39524 Score = 109 bits (120), Expect = 4e-18 Identities = 134/183 (73%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 518530 AGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGT 518589 ||| ||| | || || |||||||| | | ||| |||||||| || | || ||||||| Sbjct 14761 AGTGTTGATCGGGTTCATTGCAGCCAGGTTTTTTGCTGCATCACCGACGAGTCGTTCTGT 14702 Query 518590 CTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTC 518649 || ||||||| ||||| || || ||||||||||| |||| || ||||| ||||| Sbjct 14701 ATCCGTAAATGCTACATAGCTGGGTGTGGTGCGATTACCCAGATCGTTGGCAATGATTTC 14642 Query 518650 AACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAATACCAAT 518709 |||||| |||| || |||| || ||||| | || ||||| | ||||||||| || Sbjct 14641 AACTTTGCCATGCTGAAATACTCCGACACAGGAGTATGTCGTTCCAAGATCAATACCGAT 14582 Query 518710 AGC 518712 || Sbjct 14581 TGC 14579 >seq37146 Length=320 Score = 89.7 bits (98), Expect = 4e-12 Identities = 73/89 (82%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 518230 ACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGG 518289 ||||||||| |||| |||||||| || ||||| | |||||||| ||||| || ||||| Sbjct 10 ACCAGCAATCTTTCCCGCATCTTTGGTCGCTTGGCGCTGTGAATCATTAAAGTAGGCAGG 69 Query 518290 AACAGTAATAACGGCATCAGTTACTTCTT 518318 ||||||||| || || || |||||| ||| Sbjct 70 AACAGTAATTACTGCTTCCGTTACTGCTT 98 >seq512 Length=224977 Score = 87.8 bits (96), Expect = 1e-11 Identities = 116/161 (72%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 518154 CTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAA 518213 ||||||||| || || | ||||| || | ||| || || ||||||||||| |||| Sbjct 60433 CTTTGTCTTCTGACTTGTCCATTCCATATGCGAGAGCGGCTGCGGTTGGTTCATTGATAA 60374 Query 518214 TTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAAT 518273 || | || || ||||||| ||| ||| ||||||||||| || |||| ||||| | Sbjct 60373 CTCGGAGCACGTTGAGACCAGAAATCTGTCCGGCATCTTTAGTTGCCTGTCGCTGTGAGT 60314 Query 518274 CGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACT 518314 |||| || || || || || || || || |||| ||||| Sbjct 60313 CGTTGAAGTAAGCTGGCACGGTGATCACTGCATTCTTTACT 60273 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3777865496780422