Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_015265.1 Length=37236 Score E Sequences producing significant alignments: (Bits) Value seq31836 340 4e-89 seq52478 104 6e-18 >seq31836 Length=366 Score = 340 bits (376), Expect = 4e-89 Identities = 295/366 (81%), Gaps = 0/366 (0%) Strand=Plus/Minus Query 23890 AGACGATCGCGTGAGCCGGCGTATCTGATGGAAATGGCGTGCTTCAAGAAAGTACGGGCT 23949 |||||||| ||| ||||| | | ||| | |||||| | ||| ||||||||||| ||||| Sbjct 366 AGACGATCTCGTCAGCCGCCTGACCTGGTCGAAATGTCTTGCCTCAAGAAAGTAAGGGCT 307 Query 23950 ATGAGTGGCATACGTGACCTGAATGCGCTTACTGGCGTCTTCGGCCAGTGACCGTAGAAC 24009 |||||| ||||| || || || ||||||||| ||| ||| ||||| |||| ||| || || Sbjct 306 ATGAGTCGCATATGTTACTTGGATGCGCTTATTGGAGTCCTCGGCGAGTGCCCGAAGCAC 247 Query 24010 TTTCGCAAACGTCTGCGCTTGGATCGGGTGCTGAAAAAGCTCTGGTTCCTCGATCGCGAG 24069 ||| | |||||||| || || |||||||| ||| | || || |||||||| ||||| || Sbjct 246 CTTCCCGAACGTCTGGGCCTGAATCGGGTGTTGATAGAGTTCCGGTTCCTCAATCGCTAG 187 Query 24070 GCAGATCACCCCCTCTGCCGATGCAGCTCCCGACTGCGCCAAGAGCTGGAGAGCCGAAAT 24129 |||||| |||||||| ||||| ||||| || || ||||| ||||| ||||| || || || Sbjct 186 GCAGATGACCCCCTCAGCCGACGCAGCGCCTGATTGCGCTAAGAGTTGGAGCGCAGAGAT 127 Query 24130 TAGAAGCGTGCGCTGGAACCCGTGCCCCTGTCGCTCCACTGCCGTCTCGGTTGTGCCATC 24189 |||||||||||||| || || || |||||||| ||||| || |||||||| |||||||| Sbjct 126 CAGAAGCGTGCGCTGAAAGCCATGTCCCTGTCGTTCCACAGCGGTCTCGGTAGTGCCATC 67 Query 24190 GAGCACTGCCACCTCGAAGGTGGTTCGAGGTGCCTTGAGCTCTACTTCTGCCGGAGATAC 24249 ||| ||||||||| |||| ||||| ||||| || || | || || ||| |||| || || Sbjct 66 GAGAACTGCCACCGCGAATGTGGTCCGAGGAGCTTTAATTTCCACCTCTACCGGGGAAAC 7 Query 24250 CGTGAC 24255 |||||| Sbjct 6 CGTGAC 1 >seq52478 Length=231 Score = 104 bits (114), Expect = 6e-18 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 2875 ACGGGCACGTCCTCGCCGGCGAGCATCACCGGCGCGCACAGCAGGTATTCGGTCATGTCG 2934 || || || ||||| || ||||||| ||| ||||| | | || ||||| |||| || Sbjct 17 ACCGGAACATCCTCACCAGCGAGCAACACAGGCGCACTGATCAAATATTCAGTCAGATCA 76 Query 2935 GCGCCGCGGCGCGTGACGGTGTACTGATAGTTCTCCTGCAGCAGGCCGACCGCCTTGTCG 2994 || || || | || | |||||||| || |||||||||||| | |||||||| ||| Sbjct 77 GCACCACGCCTTGTAATCGTGTACTGGTAACTCTCCTGCAGCAACGCCACCGCCTTATCG 136 Query 2995 ATCACGTCCTGCCGGCGTGCCGACAGCTCCTCCCAGCCGACCGGATGGCTCGTGTGACTG 3054 || | | ||| | || || || | ||| |||||||| ||||| || |||||| | Sbjct 137 ATGATCTGCTGACCACGAGCGGATATCTCTTCCCAGCCAACCGGGTGAGAGGTGTGAGAG 196 Query 3055 ATGCTCGTTAGCAGTCGGAACTCGGTCTGCAG 3086 || | || || | ||| |||| |||||||| Sbjct 197 ATAGTGGTGAGTAATCGATACTCCGTCTGCAG 228 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 118949372345412