Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_015266.1 Length=40555 Score E Sequences producing significant alignments: (Bits) Value seq24545 107 5e-19 seq52478 104 6e-18 >seq24545 Length=459 Score = 107 bits (118), Expect = 5e-19 Identities = 146/201 (73%), Gaps = 2/201 (1%) Strand=Plus/Minus Query 3267 GGGAACGTCAGGTTGTGATACGGGCACTGCTT-GTCGGCCTCGGTGAAATAGCAGTCCGG 3325 || |||||||| || ||||| ||||||||||| || || || |||||||| || || Sbjct 421 GGAAACGTCAGATTATGATAAGGGCACTGCTTAGTTGGT-TCAGTGAAATAACAATCATT 363 Query 3326 CCCCTCGTTGACGATCAGGCGGCCGTCGCGCCAGGCGAGCCCGACGAAGTTCGCCGCCTG 3385 ||||||||| || | ||| ||| | ||| || | |||||| |||||| |||| | Sbjct 362 CCCCTCGTTAACCACCAGCTTGCCCTGTTTCCACGCAACCCCGACAAAGTTCACCGCATC 303 Query 3386 GCGCGCGCCGAGGTCGGCTCCACGCTCCAGGATGTTGACCATGCGCTTGAACGGCGCCGG 3445 || ||||| |||| ||||||||||| || || || |||| || || ||| || || Sbjct 302 ACGGGCGCCAAGGTGAGCTCCACGCTCTAGTATATTCACCAGTCGATTAAACTGCTGAGG 243 Query 3446 CGCCCAGATCGGGCCGAACTT 3466 | |||| |||||||| || Sbjct 242 CAAATAGATAGGGCCGAATTT 222 >seq52478 Length=231 Score = 104 bits (114), Expect = 6e-18 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 2829 ACCGGCACATCCTCGCCGGCCAACATCACGGGCGCGCACAGCAGGTATTCGGTCATGTCG 2888 ||||| |||||||| || || | || ||| ||||| | | || ||||| |||| || Sbjct 17 ACCGGAACATCCTCACCAGCGAGCAACACAGGCGCACTGATCAAATATTCAGTCAGATCA 76 Query 2889 GTGCCGCGCCGTGTCACGGTGTACTGGTAGTTCTCTTGCAGTAGGCCCACGGCCTTGTCG 2948 | || |||| ||| | ||||||||||| |||| ||||| | |||| ||||| ||| Sbjct 77 GCACCACGCCTTGTAATCGTGTACTGGTAACTCTCCTGCAGCAACGCCACCGCCTTATCG 136 Query 2949 ATCACGTCCTGCCGTCGCGCGGACAGCTCTTCCCATCCGACCGGGTGGCTCGTGTGGCTA 3008 || | | ||| | || ||||| | ||||||||| || |||||||| ||||| Sbjct 137 ATGATCTGCTGACCACGAGCGGATATCTCTTCCCAGCCAACCGGGTGAGAGGTGTGAGAG 196 Query 3009 ATGCTGGTCAGCAGGCGGAACTCGGTCTGCAG 3040 || |||| || | || |||| |||||||| Sbjct 197 ATAGTGGTGAGTAATCGATACTCCGTCTGCAG 228 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 129562657113798