Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq1300 141 2e-28 seq24 100 6e-16 seq7865 95.1 3e-14 >seq1300 Length=83366 Score = 141 bits (156), Expect = 2e-28 Identities = 159/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987 || ||| ||||||||||| ||||| || || || ||||| |||| ||||| | ||||| Sbjct 7876 CAGAACCAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCATC 7817 Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTC 195047 ||| |||||||| || |||||||| || || ||||| || || || || || || ||||| Sbjct 7816 TTCCAGCTGCTTTCCGGCGAAGATCAGGCGCTGTTGATCCGGGGGGATTCCCTCCTTGTC 7757 Query 195048 TTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGT 195107 || ||||| ||| ||||| |||||| |||| || || ||||| | ||| | || Sbjct 7756 CTGGATTTTGGCCTTCACGTTTTCAATGCTGTCAGATGCCTCTACTTCCAAGGTGATGGT 7697 Query 195108 CTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||| || |||| || ||||| || | ||||| Sbjct 7696 CTTACCAGTCAGGGTCTTTACAAAGATCTGCAT 7664 Score = 136 bits (150), Expect = 9e-27 Identities = 158/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987 || ||| ||||||||||| ||||| || || || ||||| |||| ||||| | ||||| Sbjct 8104 CAGAACCAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCATC 8045 Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTC 195047 ||| ||||| || || |||||||| || || ||||| || || || || || || ||||| Sbjct 8044 TTCCAGCTGTTTTCCGGCGAAGATCAGGCGCTGTTGATCCGGGGGGATTCCCTCCTTGTC 7985 Query 195048 TTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGT 195107 || ||||| ||| ||||| |||||| ||| || || ||||| | ||| | || Sbjct 7984 CTGGATTTTGGCCTTCACGTTTTCAATGCAGTCAGATGCCTCTACTTCTAAGGTGATGGT 7925 Query 195108 CTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||| || |||| || || ||||| | |||||| Sbjct 7924 CTTGCCAGTCAGGGTCTTGACGAAGATTTGCAT 7892 >seq24 Length=941673 Score = 100 bits (110), Expect = 6e-16 Identities = 94/120 (78%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 194920 CTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTT 194979 ||||| |||| || | ||||||||||||||| ||||| ||||||||||| | |||||| Sbjct 528629 CTGAGCCTCAGCACCAAGTGAAGAGTGGACTCCTTTTGGATATTGTAATCCGAAAGAGTG 528688 Query 194980 CTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCT 195039 | ||||| || ||||| || || || || || || || || || || |||||||| ||| Sbjct 528689 CGTCCATCCTCCAGCTGTTTCCCGGCAAATATCAGCCGCTGCTGATCCGGAGGAATTCCT 528748 >seq7865 Length=4356 Score = 95.1 bits (104), Expect = 3e-14 Identities = 149/212 (70%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || |||||||| || ||||| || || || ||||| || ||||| | |||||||| Sbjct 3384 ACCAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCACTCAGAGTGCGACCATCTTCC 3443 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || || ||||| | | || || || || || ||||| ||||||||||| Sbjct 3444 AGCTGCTTGCCAGCAAAGATCAACCTCTGCTGATCCGGGGGGATGCCCTCTTTGTCTTGG 3503 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTT---TCCACTTCAAGGGTAACCGTC 195108 || || ||| || || ||||| | || |||| || || |||||||| | || Sbjct 3504 ATCTTGGCCTTCACATTTTCAATCGAATC---ACTTGCCTCGACCTCAAGGGTGATGGTT 3560 Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || || | ||||| || || | ||||| Sbjct 3561 TTACCGGTGAGGGTTTTCACAAAGATCTGCAT 3592 Score = 95.1 bits (104), Expect = 3e-14 Identities = 149/212 (70%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||||||||| || ||||| || || || ||||| || ||||| | |||||||| Sbjct 3612 ACAAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCACTCAGAGTGCGACCATCTTCC 3671 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || || ||||| | | || || ||||| || ||||| ||||||||||| Sbjct 3672 AGCTGCTTGCCAGCAAAGATCAACCTCTGCTGATCTGGGGGGATGCCCTCTTTGTCTTGG 3731 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTT---TCCACTTCAAGGGTAACCGTC 195108 || || ||| || || || || | || ||| || || |||||||| | || Sbjct 3732 ATCTTGGCCTTCACATTTTCGATTGAATC---GCTTGCCTCTACCTCAAGGGTGATGGTT 3788 Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || || | ||||| || || | ||||| Sbjct 3789 TTACCGGTGAGGGTTTTCACAAAGATCTGCAT 3820 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1108634556911229