Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq99 116 4e-21 >seq99 Length=602874 Score = 116 bits (128), Expect = 4e-21 Identities = 148/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 19345 ACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAATGCTAATACATGTTTAATA 19404 |||| ||||||||| || ||||||||||| || || ||||| || || || ||| || Sbjct 458787 ACCAGATTTTCATTCACAATTCCATCACTTGCAGCGAAAAACGCCAACACGTGTGATATG 458846 Query 19405 AAATGTTTTTCATCTGAGGTTAATGTATTCCAATCATTAATATCTTTAGATAAATCTACT 19464 || |||| || || | | | | | | ||||||| | | |||||| | ||||| Sbjct 458847 AAGTGTTGCTCCTCGGTCTTCAGTTTGTCCCAATCAGTCAAATCTTTGCTGAGGTCTACC 458906 Query 19465 TCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTTTATACATGTTCCATATATCACGATAT 19524 ||||| ||||||||||| || ||||||||||| || ||||| | ||| || ||| |||| Sbjct 458907 TCTTCCACTGTCCAAAAGGATGCCTCTGCTTTCTTGTACATTTGCCAGATGTCATGATAC 458966 Query 19525 TGTATAGGAAATATAACAAATCTA 19548 | || || || | ||||| ||| Sbjct 458967 TTGATGGGGAAAAGTACAAACCTA 458990 Score = 89.7 bits (98), Expect = 6e-13 Identities = 97/129 (75%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 18983 CCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATCAGTCCTCtttttt 19042 |||| |||||||| || | ||||| || || | ||||||||||| || | ||||| Sbjct 457837 CCTCATCTCTACTGATGAGCTCATTGCTGAAGGTCAGACCAGGCATCAAGCCACGTTTTT 457896 Query 19043 ttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAAG 19102 | | ||||||||||| ||||||||| || || ||||| || || || || || | |||| Sbjct 457897 TCAGCCAGAATATAGCAGCAAATGACCCTGAGAAGAAGATTCCCTCGACAGCCGAGAAAG 457956 Query 19103 CAACTAGTC 19111 | || |||| Sbjct 457957 CCACCAGTC 457965 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 561690120286680