Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_017972.1 Length=280538 Score E Sequences producing significant alignments: (Bits) Value seq8179 131 3e-25 seq15960 120 5e-22 >seq8179 Length=4014 Score = 131 bits (144), Expect = 3e-25 Identities = 138/182 (76%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 22969 TCGCACTCTTCATCAGATTCAAAGAACAGAATTTGTGCGCAACCTTCGCCAGCGTAGATC 23028 ||||| ||||| || ||||||||||| | || ||| || ||||||| ||| || || Sbjct 3338 TCGCATTCTTCGTCTGATTCAAAGAAAATAACTTGCGCAACACCTTCGTTAGCATATATT 3397 Query 23029 AGTGCCGGGCTTGGTGTGGTATTGGAAAACTCCAGAGTAAGCGAGCCTTTCCATTCTGGT 23088 || || ||||| || || ||||||||||| || | |||||| |||||| ||| Sbjct 3398 TTCGCTGGCAACGGTGTTGTGTTAGAAAACTCCAGCGTGACATAGCCTTCCCATTCCGGT 3457 Query 23089 TCCAGCGGCGTGACGTTTACGATGATGCCGCAACGCGCATACGTCGATTTGCCGAGGCAG 23148 || | || |||||||| ||||| |||||||||||||||||||| || ||||| || || Sbjct 3458 TCAAAAGGGGTGACGTTAACGATAATGCCGCAACGCGCATACGTTGACTTGCCAAGACAA 3517 Query 23149 AT 23150 || Sbjct 3518 AT 3519 >seq15960 Length=761 Score = 120 bits (132), Expect = 5e-22 Identities = 131/174 (75%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 22968 TTCGCACTCTTCATCAGATTCAAAGAACAGAATTTGTGCGCAACCTTCGCCAGCGTAGAT 23027 ||| || |||||||||| ||||| |||| ||||| || |||||| ||| || || Sbjct 305 TTCACAAACTTCATCAGACTCAAAAAACAACATTTGCGCCACACCTTCATTAGCATAAAT 246 Query 23028 CAGTGCCGGGCTTGGTGTGGTATTGGAAAACTCCAGAGTAAGCGAGCCTTTCCATTCTGG 23087 ||| || || || ||||||||||| |||| ||| | ||||| |||||| || Sbjct 245 TTTTGCAGGTAAAGGAGTCGTATTGGAAAATTCCAAAGTTACATGGCCTTCCCATTCGGG 186 Query 23088 TTCCAGCGGCGTGACGTTTACGATGATGCCGCAACGCGCATACGTCGATTTGCC 23141 ||||||||| || |||||||| || ||||| ||||| ||||| |||||||| || Sbjct 185 TTCCAGCGGTGTTACGTTTACAATAATGCCACAACGTGCATAAGTCGATTTACC 132 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 896925038626960