Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19]
59,587 sequences; 511,738,253 total letters
Query= NC_018875.1
Length=119082
Score E
Sequences producing significant alignments: (Bits) Value
seq24 102 6e-17
seq1300 87.8 1e-12
>seq24
Length=941673
Score = 102 bits (112), Expect = 6e-17
Identities = 95/121 (79%), Gaps = 0/121 (0%)
Strand=Plus/Plus
Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599
|| ||||| |||| || |||||| || || ||| ||| ||||| ||||||||||| ||
Sbjct 528623 CCTCCCCTGAGCCTCAGCACCAAGTGAAGAGTGGACTCCTTTTGGATATTGTAATCCGAA 528682
Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659
||| | || | || |||| ||| || |||||||||||||| ||||| ||||||| |||
Sbjct 528683 AGAGTGCGTCCATCCTCCAGCTGTTTCCCGGCAAATATCAGCCGCTGCTGATCCGGAGGA 528742
Query 48660 A 48660
|
Sbjct 528743 A 528743
>seq1300
Length=83366
Score = 87.8 bits (96), Expect = 1e-12
Identities = 150/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| |||| |||| || || || ||| || || || ||||| || || ||| | ||
Sbjct 7881 AGACGCAGAACCAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGG 7822
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
| || |||| |||||| ||||| || ||||| ||||||||||||| ||| | ||||||
Sbjct 7821 CCATCTTCCAGCTGCTTTCCGGCGAAGATCAGGCGCTGTTGATCCGGGGGGATTCCCTCC 7762
Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728
||||| || || || || | | || || ||||| || |||| ||
Sbjct 7761 TTGTCCTGGATTTTGGCCTTCACGTTTTCAATGCTGTCAGATGCCTCTACTTCCAAGGTG 7702
Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| || || || |||| || |||||||| ||||||||
Sbjct 7701 ATGGTCTTACCAGTCAGGGTCTTTACAAAGATCTGCAT 7664
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 380660956805601
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |