Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq117 241 2e-58 seq99 86.0 1e-11 >seq117 Length=549210 Score = 241 bits (266), Expect = 2e-58 Identities = 666/1011 (66%), Gaps = 30/1011 (3%) Strand=Plus/Plus Query 221508 CGTCGGCCAGTCCCTGTACTCCGATACCGATGGGCCTGTGTCTCCTGTTGGAAGCGGC-C 221566 ||||||| || ||||| || ||||| ||||| || | ||| | | |||| || |||| | Sbjct 312954 CGTCGGCGAGACCCTGAACGCCGATGCCGATCGGACGGTGGCGCATGTTCGAT-CGGCGC 313012 Query 221567 GCTTCTGGCACGGGATAAAAGTTGACGTCGATCAGATTGTTGAGGTTCAGAGTGATGACT 221626 || || || || || ||||||| |||||| | ||||||||||| | |||||||| Sbjct 313013 GCCTCCTCAACCGGGTAGAAGTTGATGTCGATGATCTTGTTGAGGTTGCGCGTGATGACC 313072 Query 221627 TTAACCACCTCGGTCAGCTTCTGGTGATTGAACACCAACTCGCCGCCGTCGTGGAGGGGT 221686 || ||| || ||||||| || | | || | || ||| ||| Sbjct 313073 TTCGTCACGTCCTTCAGCTTGCGGAAGTCGTACGTCTTGTCCGCGCGCACGT-------- 313124 Query 221687 TCCACAAAAGCGTTTAGGGCAACGCTGGCCAGGTTACACACGGCCACCTCGTCCTTGTTG 221746 ||| ||| || || || ||| ||||| || |||||| ||| || Sbjct 313125 ---ACAT----GTTGAGCGCGACCGAGGCGAGGTTGCAGACGGCCGTCTCATCGGGCGAC 313177 Query 221747 GTATACTGTATGATCTCTGTACAGAGGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGA 221806 | |||| | ||| || || || |||||||||||||| ||||| || |||| | || Sbjct 313178 GAGTACTCGACGATTTCCGTGCACAGGTTGCTGCACTTAATGGTGCCGAGGTTCTGCTGG 313237 Query 221807 TTAGACTTGCGATTGGCAGCGTCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGA 221866 || |||||||||||| ||||||||||||||||| ||||| || || ||| ||| Sbjct 313238 TTCGACTTGCGATTGCACGCGTCCTTGTAGAGCATGTAGGGAGTTCCCGTTTCCGTCTGC 313297 Query 221867 GCCACCAGAATCTTGTCCCAGAGTTCTCTG-GCGCTCACCGTCCTCTTGACTGCACCCTC 221925 | ||| || || ||| || | ||| || | | |||||| | ||| |||| Sbjct 313298 GATTCCATGATGGCGTACCACAGCTG-CTGTGCTTTGATCGTCCTTCTCACTTTGCCCTG 313356 Query 221926 GGTCTTTTCATACCCGGTATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCC 221985 |||||| ||| ||| ||||| || || | || || | ||| ||| ||| Sbjct 313357 ---CTTTTCGTACTTGGTGTAGAGAGCTTCGAATTCGTCGCCCCAGCAGTCGGCCAAGCC 313413 Query 221986 TGGACACCTGGCGGGACACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAA 222045 || || || |||||||| ||| ||||| || ||| || ||||||| |||||| Sbjct 313414 CGGGCATTCCGCCGGACACATGAGAGACCAGTCCTGATTGAGTTCGACCCTCGTCATGAA 313473 Query 222046 GAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTT 222105 || ||||||||||| ||| | | || || ||||| | ||||| |||||| ||| | Sbjct 313474 CAGATCCGGGATCCAGAGCCCGTAGAACAGGTCTCTCGCTCGCTGTTCCTCCTTCCCGGT 313533 Query 222106 GTTTTTCCT-CAGATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGG 222164 ||| ||| | ||| || | |||||| || ||||| |||||||||||||| || || | | Sbjct 313534 GTTCTTCTTGCAG-TCGAGAAACTCGAAGATGTCCGCGTGCCACGGCTCGAGGTACATCG 313592 Query 222165 CCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATCCACCATCCTCTCCAGAGCGTTGAAGA 222224 | | ||||| || ||||||||||| ||||| || || |||| || ||||||| Sbjct 313593 CAAAGGCGCCCGGACGCTTGTTGCCGCCCTGGTCGACGTACCTCGCCGTGTTATTGAAGA 313652 Query 222225 TGCGAAGGGTCGGTACCAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGC 222284 || || | || | || ||||| || | ||||||||||| ||||| || Sbjct 313653 CTCGCAGCATGGGAAGGAGGCCGTTCGAGCAGCCGTTGGTGCCGGCGATGTAGCTTCCCG 313712 Query 222285 CGGCCCTCAGGTTACTG---GCAGACATGCCGATACCACCGGCGTGTTTCGAGATCATGG 222341 ||| | | ||| || | ||| |||||| || || ||| ||||| || | | Sbjct 313713 AGGCGCGGATGTT-GTGTATGTTGAC--GCCGATGCCTCCTGCGGACTTCGATATGAGCG 313769 Query 222342 CGCAGCTCTTGAGAGTGTCCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAA 222401 |||| ||| || ||||| ||||||||| || ||| ||||| | ||||||| | Sbjct 313770 CGCATTCCTTCAGCGTGTCGTAGATGCCCTCGATGCTGTCGTCCTTCATCGTCAGCAGGA 313829 Query 222402 AACAAGACGACATCTGAGATTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTG 222461 | || || | ||| | | | | |||||| || ||||| || ||||| | Sbjct 313830 AGCAGCTGGAGAGCTGCGGACGCGGCGTGCCGGCGTTGAAGAGCGTCGGCGACGCGTGCG 313889 Query 222462 TAAAGTAGCCCCTAGACATCAGATCGTACGTCTCTACGACTCTGGCGATGT 222512 | || | | |||| ||| | ||||||||| | | | ||| |||||| Sbjct 313890 TGAACCACTTCTCCGACAGCAGGTTGTACGTCTCGATGGCGCTGTCGATGT 313940 >seq99 Length=602874 Score = 86.0 bits (94), Expect = 1e-11 Identities = 76/93 (82%), Gaps = 4/93 (4%) Strand=Plus/Minus Query 26231 TCTACAGTACGCCTA--ACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGAC 26288 |||||| ||||| | | |||||||| || ||||| ||||||| |||||||| ||||| Sbjct 457153 TCTACA--ACGCCGAGAATCCGTTCGATTTCATGGAGCACATATCCTTGGAAGGAAAGAC 457096 Query 26289 CAACTTCTTTGAAAAGAGGGTCGGCGACTATCA 26321 |||||| ||||| |||||||| ||||| || || Sbjct 457095 CAACTTTTTTGAGAAGAGGGTTGGCGAGTACCA 457063 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928152961561280