Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq361 100 2e-15 seq37146 98.7 6e-15 seq512 96.9 2e-14 seq2490 91.5 1e-12 seq14825 86.0 4e-11 >seq361 Length=278150 Score = 100 bits (110), Expect = 2e-15 Identities = 106/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 474737 GCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCG 474796 || ||| | || || ||||| ||||| ||||| ||| || || ||||| ||||| || Sbjct 190372 GCTGTAGTAACAGTACCAGCCTATTTCAATGACAGTCAGCGGCAGGCAACGAAAGACGCC 190313 Query 474797 GGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTT 474856 || | ||| | ||||| ||||| |||||||||| || ||||||||||| || || || Sbjct 190312 GGCACCATTTCTGGTCTCAATGTCCTACGTATTATCAACGAACCAACAGCTGCAGCTATT 190253 Query 474857 GCTTATGGTCTTGATAAGAA 474876 || ||||| ||||| || || Sbjct 190252 GCATATGGACTTGACAAAAA 190233 >seq37146 Length=320 Score = 98.7 bits (108), Expect = 6e-15 Identities = 75/89 (84%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 474723 AAGAAGTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAG 474782 ||| |||||| || ||||||||||||||||| || || ||||||||||| || || |||| Sbjct 98 AAGCAGTAACGGAAGCAGTAATTACTGTTCCTGCCTACTTTAATGATTCACAGCGCCAAG 39 Query 474783 CAACTAAAGATGCGGGAAGAATTGCAGGT 474811 | || ||||||||||||| ||||| ||| Sbjct 38 CGACCAAAGATGCGGGAAAGATTGCTGGT 10 >seq512 Length=224977 Score = 96.9 bits (106), Expect = 2e-14 Identities = 104/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 474727 AGTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAAC 474786 ||||| ||||||| || || || ||||| || || || || || || || || ||||| Sbjct 60273 AGTAAAGAATGCAGTGATCACCGTGCCAGCTTACTTCAACGACTCACAGCGACAGGCAAC 60332 Query 474787 TAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGC 474846 ||||||||| ||| ||| | ||||| || || | || |||| ||||||||||| || Sbjct 60333 TAAAGATGCCGGACAGATTTCTGGTCTCAACGTGCTCCGAGTTATCAATGAACCAACCGC 60392 Query 474847 AGCCGCACTTGCTTATGG 474864 |||||| || || ||||| Sbjct 60393 AGCCGCTCTCGCATATGG 60410 >seq2490 Length=39524 Score = 91.5 bits (100), Expect = 1e-12 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 474737 GCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCG 474796 || ||| | || || ||||||||||| ||||| ||| || || ||||| ||||| || Sbjct 15749 GCCGTAGTAACAGTACCAGCATATTTCAATGACAGTCAGCGGCAGGCAACGAAAGACGCC 15808 Query 474797 GGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTT 474856 | | |||| | ||||| ||||| |||| |||| | ||||||||||| || || || Sbjct 15809 GCCACAATTTCTGGTCTCAATGTGCTACGACTTATCAGCGAACCAACAGCTGCAGCTATT 15868 Query 474857 GCTTATGGTCTTGATAAGAA 474876 || ||||| ||||| || || Sbjct 15869 GCATATGGACTTGACAATAA 15888 >seq14825 Length=871 Score = 86.0 bits (94), Expect = 4e-11 Identities = 102/136 (75%), Gaps = 2/136 (1%) Strand=Plus/Minus Query 474740 GTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGA 474799 || ||||| || || || |||||| ||||| | ||||||||||| || |||||||||| Sbjct 343 GTCATTACGGTACCTGCTTATTTTGATGATGCGCAACGTCAAGCCACCAAAGATGCGGCT 284 Query 474800 AGAATTGCAGGTCTTAATGTTTTACGTATTATT-AATGAACCAACAGCAGCCGCACTTGC 474858 | | || ||| | ||||| | || ||||| |||||||| |||||||| || |||| Sbjct 283 CGTTTGGCTGGTTTGAATGTCTATCG-CTTATTGAATGAACCGACAGCAGCAGCCGTTGC 225 Query 474859 TTATGGTCTTGATAAG 474874 || ||| | ||| || Sbjct 224 CTACGGTTTGGATCAG 209 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3265623224453876