Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq7865 170 3e-37 seq1300 150 2e-31 seq24 105 9e-18 seq361 93.3 6e-14 seq512 87.8 2e-12 seq2490 84.2 3e-11 >seq7865 Length=4356 Score = 170 bits (188), Expect = 3e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||||||||||||||| || || ||||| |||||||| ||||| ||| | Sbjct 3820 ATGCAGATCTTTGTGAAAACCCTCACCGGTAAAACCATCACCCTTGAGGTAGAGGCAAGC 3761 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 || ||||||| || | || |||||||| ||||| || || ||||| || || |||||| Sbjct 3760 GATTCAATCGAAAATGTGAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCAGATCAG 3701 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || | | || |||||||| || ||||| |||||||| || || || ||| |||||| Sbjct 3700 CAGAGGTTGATCTTTGCTGGCAAGCAGCTGGAAGATGGTCGCACTCTGAGTGACTACAAC 3641 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 | || ||||||||||| || |||||||| || | || || ||||| Sbjct 3640 ATCCAGAAGGAGTCTACCCTTCACCTTGTCCTGCGTCTGCGTGGTGG 3594 Score = 158 bits (174), Expect = 2e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||||||||||||||| || || ||||| |||||||| ||||| ||| | Sbjct 3592 ATGCAGATCTTTGTGAAAACCCTCACCGGTAAAACCATCACCCTTGAGGTCGAGGCAAGT 3533 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 || | || || || | || |||||||| ||||| || || ||||| || || |||||| Sbjct 3532 GATTCGATTGAAAATGTGAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCGGATCAG 3473 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || | | || |||||||| || ||||| |||||||| || || || ||| |||||| Sbjct 3472 CAGAGGTTGATCTTTGCTGGCAAGCAGCTGGAAGATGGTCGCACTCTGAGTGACTACAAC 3413 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 | || ||||||||||| || ||||| || || | || || ||||| Sbjct 3412 ATCCAGAAGGAGTCTACCCTTCACCTGGTCCTGCGTCTGCGTGGTGG 3366 Score = 93.3 bits (102), Expect = 6e-14 Identities = 166/239 (69%), Gaps = 14/239 (6%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACT-ATCACCCTCGAGGTTGAGTCGTC 171920 ||||| || |||| ||||| ||||| || ||| |||||||| |||| ||| | Sbjct 4058 ATGCAGATATTTGCTGAAACCTGCACTGGTAAGACTTATCACCCTT-AGGTAGAGGCAAG 4000 Query 171921 AGACACAATCGATAACATC---AAAGCCAAGATTCAAGAT--------AAGGAAGGCATT 171969 || | |||| ||| || || |||||||| | ||| || || ||||| Sbjct 3999 TGATCCTATCG-TAAAATGTGGAAGGCCAAGATGCCAGACTCCAGGACAAAGAGGGCATC 3941 Query 171970 CCACCCGATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTC 172029 || || |||||||| | | || |||||||| || ||||| |||||||| || || || Sbjct 3940 CCCCCGGATCAGCAGAGGTTGATCTTTGCTGGCAAGCAGCTGGAAGATGGTCGCACTCTG 3881 Query 172030 GCTGATTACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 ||| |||||| | || ||||||||||| || ||||| || || | || || ||||| Sbjct 3880 AGTGACTACAACATCCAGAAGGAGTCTACCCTTCACCTGGTCCTGCGTCTGCGTGGTGG 3822 >seq1300 Length=83366 Score = 150 bits (166), Expect = 2e-31 Identities = 175/235 (74%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 171861 TATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTC 171920 |||||| |||||||| || ||||| ||||| || || |||||| | || || ||| | || Sbjct 7663 TATGCAGATCTTTGTAAAGACCCTGACTGGTAAGACCATCACCTTGGAAGTAGAGGCATC 7722 Query 171921 AGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCA 171980 |||| || || ||| | || ||||| || || || ||||| || || || || ||||| Sbjct 7723 TGACAGCATTGAAAACGTGAAGGCCAAAATCCAGGACAAGGAGGGAATCCCCCCGGATCA 7782 Query 171981 GCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAA 172040 || || || || || || || || ||||| |||||||| || || || | || ||||| Sbjct 7783 ACAGCGCCTGATCTTCGCCGGAAAGCAGCTGGAAGATGGCCGCACTCTGTCCGACTACAA 7842 Query 172041 CGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG--TGCAA 172093 | | || |||||||||||||| ||||| ||||| | || || || || ||||| Sbjct 7843 CATCCAGAAGGAGTCTACTCTTCACCTGGTTCTGCGTCTGCGTGGAGGCATGCAA 7897 Score = 149 bits (164), Expect = 8e-31 Identities = 160/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||||||||| || || ||||| ||||| || || |||||| | || || ||| | || Sbjct 7892 ATGCAAATCTTCGTCAAGACCCTGACTGGCAAGACCATCACCTTAGAAGTAGAGGCATCT 7951 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||| || || ||| | || ||||| || || || ||||| || || || || ||||| Sbjct 7952 GACTGCATTGAAAACGTGAAGGCCAAAATCCAGGACAAGGAGGGAATCCCCCCGGATCAA 8011 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || || || || || |||||||| |||||||| || || || | || |||||| Sbjct 8012 CAGCGCCTGATCTTCGCCGGAAAACAGCTGGAAGATGGCCGCACTCTGTCCGACTACAAC 8071 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073 | || |||||||||||||| ||||| ||||| Sbjct 8072 ATCCAGAAGGAGTCTACTCTTCACCTGGTTCT 8103 >seq24 Length=941673 Score = 105 bits (116), Expect = 9e-18 Identities = 100/128 (78%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 171963 AGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACG 172022 ||| ||||| || |||||||| || || || ||||| || |||||||| || |||||||| Sbjct 528748 AGGAATTCCTCCGGATCAGCAGCGGCTGATATTTGCCGGGAAACAGCTGGAGGATGGACG 528689 Query 172023 TACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCG 172082 || || | |||||||| | ||||||||||| ||||| ||| | || || ||||| | Sbjct 528688 CACTCTTTCGGATTACAATATCCAAAAGGAGTCCACTCTTCACTTGGTGCTGAGGCTCAG 528629 Query 172083 GGGTGGTG 172090 ||| |||| Sbjct 528628 GGGAGGTG 528621 Score = 89.7 bits (98), Expect = 7e-13 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 171859 AGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCG 171918 || ||||| ||||||||||| || ||||||||||| || |||||||| |||||||| | Sbjct 529599 AGGATGCAGATCTTTGTGAAGACTCTTACTGGAAAGACCATCACCCTTGAGGTTGAACCC 529540 Query 171919 TCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGG 171965 ||| || || || | || || |||||||||||||||||||| Sbjct 529539 AGTGACTGCATTGAAAATGTAAAGGCAAAGATTCAAGATAAGGAAGG 529493 >seq361 Length=278150 Score = 93.3 bits (102), Expect = 6e-14 Identities = 87/111 (78%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 195866 AATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAA 195925 |||||| | ||||| ||||| || |||||||| |||||||||||| | | | |||||| Sbjct 189909 AATGTACTCATCTTCGATCTGGGGGGTGGTACTTTTGATGTCTCAATCTTGACCATTGAA 189850 Query 195926 GGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGT 195976 | || || || || || || |||||||||||||||| ||| |||| ||| Sbjct 189849 GACGGCATCTTTGAGGTGAAATCTACTGCTGGTGATACGCATTTAGGAGGT 189799 Score = 84.2 bits (92), Expect = 3e-11 Identities = 112/153 (73%), Gaps = 2/153 (1%) Strand=Plus/Minus Query 195698 ACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCG 195757 |||||| | | || || || || ||||| || || |||| ||| || || ||||| Sbjct 190384 ACTGTGGCAAACGCTGTAGTAACAGTACCAGCCTATTTCAATGACAGTCAGCGGCAGGCA 190325 Query 195758 ACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTA-GAATTATCAATGAACCAAC 195816 || || ||||| | | ||| | ||||| || |||| || | |||||||| |||||||| Sbjct 190324 ACGAAAGACGCCGGCACCATTTCTGGTCTCAA-TGTCCTACGTATTATCAACGAACCAAC 190266 Query 195817 AGCGGCTGCAATTGCTTATGGTCTGGACAAGAA 195849 ||| || || ||||| ||||| || ||||| || Sbjct 190265 AGCTGCAGCTATTGCATATGGACTTGACAAAAA 190233 >seq512 Length=224977 Score = 87.8 bits (96), Expect = 2e-12 Identities = 114/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 195690 TGGGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAAC 195749 |||||| || || || ||||||| | || || || |||||||||| || ||||| | Sbjct 60263 TGGGTACGACAGTAAAGAATGCAGTGATCACCGTGCCAGCTTACTTCAACGACTCACAGC 60322 Query 195750 GACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATG 195809 ||||||| || || || || | ||| | ||||| ||| || || ||||||||| Sbjct 60323 GACAGGCAACTAAAGATGCCGGACAGATTTCTGGTCTCAACGTGCTCCGAGTTATCAATG 60382 Query 195810 AACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAG 195847 ||||||| || || || | || ||||| |||||||| Sbjct 60383 AACCAACCGCAGCCGCTCTCGCATATGGAATGGACAAG 60420 >seq2490 Length=39524 Score = 84.2 bits (92), Expect = 3e-11 Identities = 112/153 (73%), Gaps = 2/153 (1%) Strand=Plus/Plus Query 195698 ACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCG 195757 |||||| || | || || || || ||||| || || |||| ||| || || ||||| Sbjct 15737 ACTGTGGAAAACGCCGTAGTAACAGTACCAGCATATTTCAATGACAGTCAGCGGCAGGCA 15796 Query 195758 ACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTA-GAATTATCAATGAACCAAC 195816 || || ||||| || | ||| | ||||| || ||| || || |||||| |||||||| Sbjct 15797 ACGAAAGACGCCGCCACAATTTCTGGTCTCAA-TGTGCTACGACTTATCAGCGAACCAAC 15855 Query 195817 AGCGGCTGCAATTGCTTATGGTCTGGACAAGAA 195849 ||| || || ||||| ||||| || ||||| || Sbjct 15856 AGCTGCAGCTATTGCATATGGACTTGACAATAA 15888 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657372399414640