Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_021339.1 Length=51077 Score E Sequences producing significant alignments: (Bits) Value seq20357 145 2e-30 >seq20357 Length=552 Score = 145 bits (160), Expect = 2e-30 Identities = 215/302 (71%), Gaps = 2/302 (1%) Strand=Plus/Minus Query 39099 GCCGCCATGTACTCGGCCGGGTAGTGCGTCTTCAACCACGCCGTGCGGTACGCGATGAGT 39158 ||||||||| | |||||||| | ||||| ||| | |||||||||| | || |||| ||| Sbjct 476 GCCGCCATGAATTCGGCCGGATGGTGCGCCTTGAGCCACGCCGTGTGATAAGCGAGGAGC 417 Query 39159 CCGTACGCCGCCGAGTGCGCCTTGTTGAAGGCGTAGCCAGCGAAGGGGACCAGCACGTCC 39218 |||| || |||| ||||| |||||||||| ||||||| ||||| ||| || ||| Sbjct 416 GCGTAAGCGGCCGCGTGCGACTTGTTGAAGCCGTAGCCCGCGAACTTCTCCATCAAGTCG 357 Query 39219 CACACTGCCTGGATGGCACCGTCCGAGTAGCC-TCGCTCGCGCGCTCCCTTCTGGAAGTT 39277 | | | | || || | ||| | |||| ||| || | | |||| | Sbjct 356 AAGGTTTCGTCCGCCTTTTCGCGCGTGAGGCCGTTTTTCGC-CGCGCCTTCCGCGAAGAT 298 Query 39278 CACGAACTCCTTGGCCAGAACCTCGGGCTTCTTCTTGCCCATCGCCCGGCGAAGCAGGTC 39337 | || | |||||||| ||||||||||||||||||||||||| || || |||| ||| Sbjct 297 CTCGCGGTGCTTGGCCATTTCCTCGGGCTTCTTCTTGCCCATCGCGCGACGCAGCAAGTC 238 Query 39338 GGCCTGACCCAGGGTGTACCCGGCCATGACCTGTGCAACCTTCTGCACCTGCTCCTGGTA 39397 ||| || || | ||| ||| | |||| ||| || | || | ||||||||||||||| Sbjct 237 GGCGCCGCCGAGCGAGTAGCCGCCGATGATCTGCGCCATCTGCATCACCTGCTCCTGGTA 178 Query 39398 GA 39399 || Sbjct 177 GA 176 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 163209232086066