Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_021534.1 Length=47552 Score E Sequences producing significant alignments: (Bits) Value seq33764 87.8 5e-13 seq44290 86.0 2e-12 >seq33764 Length=348 Score = 87.8 bits (96), Expect = 5e-13 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 33231 ATATATGCCTTCTGGCGGCGCTGTGTGCAATCTGTCTCTGGCAACATCAGAGCAGTGGAA 33290 ||| |||||| ||| ||||| || ||| | ||| | |||||||| || ||||| Sbjct 122 ATACATGCCTAGTGGTGGCGCCGTAACCAACATATCTATCGCAACATCCGAAAGCTGGAA 181 Query 33291 CGATAAAGCAACAGGGGAAAAGAAAGAGCAGACAGAATGGCATCGCGTGGTTATCTTCGG 33350 || ||| | || |||| ||||| | || || |||||| | | ||| |||| Sbjct 182 AGACAAACAGAGCGGCGAAACCAAAGAACGTACCGAGTGGCATAACATCGTTTTCTTTAA 241 Query 33351 AAAGCTGGCAGAGGTGGCTGGCGAATACCTGCGCAAAGGCTCTCAGGTGTATGTAGAAGG 33410 ||||||||| | | ||| ||||| | ||||||||||| ||| | ||||||||||| Sbjct 242 TCGGCTGGCAGAAATTGTTGGTGAATATGTTCGCAAAGGCTCACAGATATATGTAGAAGG 301 Query 33411 AAAATTACGTACTCGCAAATGGACAGATCAAAGCGG 33446 | |||| || || |||||| ||| ||| ||| Sbjct 302 CGCACTACGCACCCGTAAATGGCAGGATAAAAACGG 337 >seq44290 Length=273 Score = 86.0 bits (94), Expect = 2e-12 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 33370 GGCGAATACCTGCGCAAAGGCTCTCAGGTGTATGTAGAAGGAAAATTACGTACTCGCAAA 33429 ||||||||||| |||||||| |||||||| ||| | ||||| ||||||| || |||||| Sbjct 149 GGCGAATACCTACGCAAAGGATCTCAGGTCTATATCGAAGGTAAATTACAAACGCGCAAA 90 Query 33430 TGGACAGATCAAAGCGG 33446 ||| ||| |||||||| Sbjct 89 TGGCAAGACCAAAGCGG 73 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 151937213764716