Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_021857.1 Length=41475 Score E Sequences producing significant alignments: (Bits) Value seq14089 132 1e-26 seq12792 102 2e-17 seq12230 100 8e-17 >seq14089 Length=980 Score = 132 bits (146), Expect = 1e-26 Identities = 341/518 (66%), Gaps = 1/518 (0%) Strand=Plus/Plus Query 39101 TGAAGTGGTCAACAAAAACTGGCCACCGAGTTAGAGTTTTTCCAGTATCGATTTTCCGAT 39160 || ||||||||| ||| ||| || | ||||||||| ||| || |||||||| | Sbjct 275 TGTAGTGGTCAAGTAAATTTGGTCAGAGTTTTAGAGTTTACCCAATACCGATTTTCTGCA 334 Query 39161 TCGTTTGGGGGTAACCCACCGTTATATTCGTGCGGTCTTAGTGCACTGTAATATCCCACG 39220 |||||||| | ||||||| | |||| ||| ||||| | |||||||| || | | Sbjct 335 TCGTTTGGAGATAACCCATCATTATGACGGTGTGGTCTAACCTGGCTGTAATAGCCAATG 394 Query 39221 ATATAGTCCGTTATGGCGTGAGCTGCCTCGCTGAAGCTTACGTAACCCACCACCGGCATC 39280 || |||||| | | || ||| || | || | |||| || | || | | Sbjct 395 ATGTAGTCCAGCACTGTCTGCTTTGCTTCAATAAATGATTGAAAACCTACTTCAGGTACC 454 Query 39281 CATTCGTTCTTCAGACTCCTGAAGAAGCGTTCCATTGGGCTGTTATCCCAGCAGTTTCCG 39340 ||||| | || | |||||| || || || ||||| || || ||||| || || || Sbjct 455 CATTCACTTTTTAAACTCCTAAAAAATCGCTCCATCGGTGCATTGTCCCAACAATTACCT 514 Query 39341 CGCCGGCTCATACTCTGTCTGATCTGGTATCGCCACAATAACTGCCCGGAACTGCCTGCT 39400 || || ||||| || ||| | ||||| || ||||| | | || | | || | | | || Sbjct 515 CGACGACTCATGCTTTGTTTTATCTGATAACGCCAAAGCAGTTGTCTGAAA-TACGTACT 573 Query 39401 CGTATAATGACTGCCCTGATCGCTGTGGAACATCACCCCGCCGGGCTTACCACGGGTTTC 39460 ||||| |||| || ||||| || ||||| || | | || ||||| | || Sbjct 574 GGTATAGTGACACCCTTGATCAGAATGAAACATGACACGACTCGGTTTACCTCTTCGCTC 633 Query 39461 CCATGCCATTTCCAGCGCTTTCATGGTGAGCCTGCTGTCCGGCGAGAACGACATGGCCCA 39520 | ||||| ||| |||| ||| || || ||||| || ||||| ||||| Sbjct 634 ATAAGCCATGCTCAGTGCTTGGCCGGTTAGTTGTGAGTTAGGCGATAATGACATCGCCCA 693 Query 39521 GCCCACTGGTTTTCTTGCGAACAGGTCGAGAACAACGGCGAGGTACGCCCAGCGCTTACC 39580 || || || ||||| || | | || | ||| || || | || ||||| || || Sbjct 694 ACCAACAGGCTTTCTGGCATATAAATCCATAACTACTGCCAAATAAGCCCAACGACGCCC 753 Query 39581 CGTCCAGATATAGGTCACATCACCGCACCACACCTGAT 39618 || ||| ||||| || |||||||||||||| |||| || Sbjct 754 CGACCAAATATACGTTACATCACCGCACCAGACCTCAT 791 >seq12792 Length=1384 Score = 102 bits (112), Expect = 2e-17 Identities = 148/205 (72%), Gaps = 3/205 (1%) Strand=Plus/Minus Query 39275 GGCATCCATTC-GTTCTTCAGACTCCTGAAGAAGCGTTCCATTGGGCTGTTATCCCAGCA 39333 ||||||||||| ||| | || || ||||| || || |||||||| |||||||||||| Sbjct 1080 GGCATCCATTCTGTTTTATAG-CTTCTGAAAAAACGCTCCATTGGCGCGTTATCCCAGCA 1022 Query 39334 GTTTCCGCGCCGGCTCATACTCTGTCTGATCTGGTATCGCCACAATAACTGCCCGGAACT 39393 || || |||||||||||||| ||| | || || |||||||| | | || || | | Sbjct 1021 ATTGCCACGCCGGCTCATACTTTGTGTTATTTGATATCGCCATAGTCGTTG-TCGATATT 963 Query 39394 GCCTGCTCGTATAATGACTGCCCTGATCGCTGTGGAACATCACCCCGCCGGGCTTACCAC 39453 | ||| || ||||||| |||||| || ||| ||||| || || || |||| | Sbjct 962 TCAAGCTTGTGTAATGACAGCCCTGGTCAGAGTGAAACATGACGCCTTTCGGTCTACCGC 903 Query 39454 GGGTTTCCCATGCCATTTCCAGCGC 39478 || |||| | |||||| ||| || Sbjct 902 GGCTTTCATAAGCCATTCGCAGTGC 878 >seq12230 Length=1820 Score = 100 bits (110), Expect = 8e-17 Identities = 153/215 (71%), Gaps = 5/215 (2%) Strand=Plus/Plus Query 39275 GGCATCCATTCGTTCTTCAGACTCCTGAAGAAGCGTTCCATTGGGCTGTTATCCCAGCAG 39334 |||||||||||| | || | || || ||| | |||||||| || ||||||||||| Sbjct 630 GGCATCCATTCGGTTTTGAAGCTTCTAAAGCACCGTTCCATGGGAGCATTATCCCAGCAA 689 Query 39335 TTTCCGCGCCGGCTCATACTCTGTCTGATCTGGTATCGCCACAATAACTG-CCCGGAACT 39393 || || || ||||||||||||||| |||| | |||||||| ||| ||| || Sbjct 690 TTACCACGGCGGCTCATACTCTGTTTGATTTTGTATCGCC---ATAGCTGTTGAATAAAG 746 Query 39394 GC-CTGCTCGTATAATGACTGCCCTGATCGCTGTGGAACATCACCCCGCCGGGCTTACCA 39452 || ||||||| ||||| | ||| ||||| |||||||| ||| || ||||| Sbjct 747 GCTTTGCTCGTGTAATGGCAGCCTTGATCCGAATGGAACATGACCTTTTGAGGTTTACCT 806 Query 39453 CGGGTTTCCCATGCCATTTCCAGCGCTTTCATGGT 39487 | || ||| | || | || |||||||| ||||| Sbjct 807 CTGGCTTCATAAGCGACTTGTAGCGCTTTTATGGT 841 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132504573952278