Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq117 203 4e-46 seq246 129 7e-24 seq124 129 7e-24 seq1860 116 5e-20 seq7 114 2e-19 seq1835 113 6e-19 seq950 98.7 1e-14 >seq117 Length=549210 Score = 203 bits (224), Expect = 4e-46 Identities = 219/290 (76%), Gaps = 0/290 (0%) Strand=Plus/Plus Query 1630062 GCACTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTT 1630121 || |||||||||||| | |||||||| || ||||| || |||||||| | ||||||||| Sbjct 313618 GCCCTGGTCGACGTACCTCGCCGTGTTATTGAAGACTCGCAGCATGGGAAGGAGGCCGTT 313677 Query 1630122 GGACTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAA 1630181 || |||||||||||| || | |||| || | |||||| | ||||| | | Sbjct 313678 CGAGCAGCCGTTGGTGCCGGCGATGTAGCTTCCCGAGGCGCGGATGTTGTGTATGTTGAC 313737 Query 1630182 GCCGATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCC 1630241 ||||||||| || || ||||| || ||||||||||| | || ||||||||||||||||| Sbjct 313738 GCCGATGCCTCCTGCGGACTTCGATATGAGCGCGCATTCCTTCAGCGTGTCGTAGATGCC 313797 Query 1630242 CTCGATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGT 1630301 |||||| |||| ||||||| || || ||||| ||| ||||| ||| ||| Sbjct 313798 CTCGATGCTGTCGTCCTTCATCGTCAGCAGGAAGCAGCTGGAGAGCTGCGGACGCGGCGT 313857 Query 1630302 GCCGGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACA 1630351 |||||||||||||||||| |||| ||| |||||| ||| | ||||| Sbjct 313858 GCCGGCGTTGAAGAGCGTCGGCGACGCGTGCGTGAACCACTTCTCCGACA 313907 Score = 192 bits (212), Expect = 7e-43 Identities = 375/547 (69%), Gaps = 18/547 (3%) Strand=Plus/Plus Query 1626981 CTGGTCGACGGTAAACTGGATGGCGTCGGCGGCGGGCCTGGTGCGCAGATAGTACATGCC 1627040 || ||| || || |||| ||| ||| ||||||| | | |||||||| ||||||||||| Sbjct 312223 CTTGTCCACCGTGAACTTGATCGCGCTCGCGGCGGCCTTTGTGCGCAGGTAGTACATGCC 312282 Query 1627041 GGTCTTGAGGCCGCGGCGCCACGCGTAGGCGTGCATCGACGTGATGCGCTCGGGCGT--- 1627097 |||||| | ||| |||||||||| |||||| || | ||| || ||| Sbjct 312283 GGTCTTCACGCCCTTCTTCCACGCGTAGAAGTGCATGCTGGTAA---GCTTGG-CGTAAT 312338 Query 1627098 -CGCGTCGGCGCAGTACAGGTTGAGCGACTGGCTCTGGTCGACATAGGGCGCGCGATCGG 1627156 || |||||| || | || || ||||| |||||||||| ||| ||||||||| Sbjct 312339 TCGGCTCGGCGAGGTGAATATTCAGTGACTGACTCTGGTCGATGAAGGCGCCGCGATCGG 312398 Query 1627157 CCGCCATGTCGATGGTGACCCGGTTGGGCACCTCCCACACGGTCTTGAAGATGGCCTTGA 1627216 | ||||||| ||| | | | | | |||||| ||||||||| ||| ||| | Sbjct 312399 CAGCCATGTTGATTATCGTCTTCTGCGAGATCTCCCAGACGGTCTTGTAGAGCTGCTTCA 312458 Query 1627217 GGTCGGGCGGCACCTCGTCGTCGCCAAAGCCCTGCACCGAGCCGTGCGCCGCGACGAGCC 1627276 ||||| ||| | ||| ||| || ||| || ||||||| | | |||| || | Sbjct 312459 GGTCGTCCGGGATCTCCTCGACGTT------CTGAACGGAGCCGTTCTCGGCGATGATGC 312512 Query 1627277 TGTCGCGAAAGTCGGGCGTCC-ACAGGCCGCGCGCCATCAGGCGCTTGACCAGGTGGCGG 1627335 || | || || ||||| ||||||||| | | | ||| ||| | ||||||| || Sbjct 312513 GGTTCTTCATGT-GGTCGTCCCACAGGCCGCACTCGGTGAGGTCCTTCAGCAGGTGGTGG 312571 Query 1627336 TTGACCACGGTAAAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGTTGGTGATGACC 1627395 ||||| | || ||||| ||||||||||| |||| |||||||||| | ||| || Sbjct 312572 TTGACGATCTGGAACTCGCCGGAGAGCACGCGCCGCGAGTAGATGTTGCTCGTGTACGCC 312631 Query 1627396 TCGCACGCCTCGGTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGCCACG 1627455 ||| || ||| ||||||| |||||||| | ||||| || || ||||| |||| | Sbjct 312632 TCGATCGACTCATTGTTGCCGAGGATCTGTGCCGTCGACGCGGTCGGCATCGGCGCGAGC 312691 Query 1627456 AGGAGCGAGTTGCGCAGGCCGTG-CTGTCGAACTAGCGCGCGCAGCGCGTCCCAGTCCCA 1627514 || || |||||| | |||||| | ||| || ||| |||||| ||||||||| Sbjct 312692 AGCAGGCTGTTGCGGACGCCGTGAGCGGCGATCT-TCGCCTTGAGCGCGCTCCAGTCCCA 312750 Query 1627515 GCGGCCG 1627521 | || || Sbjct 312751 GAGGTCG 312757 Score = 114 bits (126), Expect = 2e-19 Identities = 110/141 (78%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 1627835 CGCTCTCCCACGGCAGGTCCATCATGGCAAACACGTCGGCGAGGCCCTGCACGCCGACGC 1627894 ||||||| |||||| | ||| | | ||| |||||||||| ||||| ||||||| || Sbjct 312921 CGCTCTCGAACGGCAAGCGCATGAGGATGAACGCGTCGGCGAGACCCTGAACGCCGATGC 312980 Query 1627895 CCATCGGCCGGTGGCGCAGGTTCGAGTGGCGGGCCTCGGGCACCGGGTAGTGGTTGATGT 1627954 | ||||| |||||||||| |||||| |||| ||||| ||||||||| |||||||| Sbjct 312981 CGATCGGACGGTGGCGCATGTTCGATCGGCGCGCCTCCTCAACCGGGTAGAAGTTGATGT 313040 Query 1627955 CGATCACGCGGTTGAGGTTGC 1627975 |||| | ||||||||||| Sbjct 313041 CGATGATCTTGTTGAGGTTGC 313061 Score = 98.7 bits (108), Expect = 1e-14 Identities = 291/453 (64%), Gaps = 6/453 (1%) Strand=Plus/Plus Query 1628151 GGGCGACGAAAACTGGACGATCTCGGTGCACAGGTTGGCCGACGTCGTCGTACCCAGGTT 1628210 ||||||||| ||| |||||| || |||||||||||| || | | || || ||||| Sbjct 313171 GGGCGACGAGTACTCGACGATTTCCGTGCACAGGTTGCTGCACTTAATGGTGCCGAGGTT 313230 Query 1628211 CTGCTGGTTGGTGGTCAGGTTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTC 1628270 ||||||||| | | | ||| |||||||||| |||||||||||| | || || || Sbjct 313231 CTGCTGGTTCGACTTGCGATTGCACGCGTCCTTGTAGAGCATGTAGGGAGTTCCCGTTTC 313290 Query 1628271 GATCTGCGCCGCGACGATGGCCGACCAGATCTGGCGCGCGGGCA-CGACAGTCCGCGCGC 1628329 |||||| | | |||||| |||| | ||| | || | || | || | | Sbjct 313291 CGTCTGCGATTCCATGATGGCGTACCACAGCTGCTGTGCTTTGATCGTCCTTCT-CACTT 313349 Query 1628330 GGCCCTNNNNNNNNNNNNNNNNNNNNNNNNNNTCAAAGGCCGCGCCGTAGCACTCGTGCA 1628389 ||||| || || | |||| |||| ||| || Sbjct 313350 TGCCCTGCTTTTCGTACTTGGTGTAGAGAGCTTCGAATTCGTCGCCCCAGCAGTCGGCCA 313409 Query 1628390 GGCCGGGCGCCTCGGACGGACAAAAGAGCGACCAGTCGCCACCGG--TCACCGCGCGGCG 1628447 ||| || || | |||||| | ||| |||||||| | | || | | || | Sbjct 313410 AGCCCGGGCATTCCGCCGGACACATGAGAGACCAGTCCTGATTGAGTTCGACCCTCGTC- 313468 Query 1628448 CATAAAGAGGTCACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTT 1628507 || || || || |||| || |||| || ||||| | ||| || | |||||||| Sbjct 313469 -ATGAACAGATCCGGGATCCAGAGCCCGTAGAACAGGTCTCTCGCTCGCTGTTCCTCCTT 313527 Query 1628508 GCCGTGGTTCTTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTA 1628567 ||| |||||| ||| |||||| | |||| ||||| |||||||||||||| ||||| Sbjct 313528 CCCGGTGTTCTTCTTGCAGTCGAGAAACTCGAAGATGTCCGCGTGCCACGGCTCGAGGTA 313587 Query 1628568 GCAGGCAAAGGCGCCCTTGCGCTTGCCGCCGCC 1628600 |||||||||||| |||||| |||||| Sbjct 313588 CATCGCAAAGGCGCCCGGACGCTTGTTGCCGCC 313620 >seq246 Length=352277 Score = 129 bits (142), Expect = 7e-24 Identities = 152/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| | | ||| || || || || ||||||||||| | | || Sbjct 47892 GCTTGGCCAGCTCTCCGGGAAGGATGAGACGGACAGCAGTCTGGATCTCCCTGCTCGAGA 47951 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| ||||||||||||| | |||| | |||| || |||| | Sbjct 47952 TGGTTGAGCGCTTGTTGTAGTGCGCCAGACGAGAAGACTCGCCGGCGATACGCTCGAAGA 48011 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||| ||||| |||| | |||||||| ||| |||| Sbjct 48012 TGTCGTTGACGAAGCTGTTCATGATGCCCATCGCCTTGCTAGAGATGCCGGTGTCTGGGT 48071 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | |||||||| | ||||||||||||| Sbjct 48072 GAACCTGCTTCAACACCTTGTAGATG 48097 Score = 114 bits (126), Expect = 2e-19 Identities = 151/207 (73%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGC-GCGTGCCG 1254401 || ||||||| || | | | ||| || || || || ||||||||||| | || | | Sbjct 49721 GCTTGGCCAGCTCTCGCGGAAGGATGAGACGGACAGCAGTCTGGATCTCCCTGCTCGGAG 49662 Query 1254402 ATCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATC 1254461 || || ||||||||| ||||||||||||| | |||| | |||| || |||| Sbjct 49661 ATGGTTGAGCGCTTGTTGTAGTGCGCCAGACGAGAAGACTCGCCGGCGATACGCTCGAAG 49602 Query 1254462 ATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGG 1254521 ||||||||||| || |||||||| ||||| |||| | ||||| || ||| ||| Sbjct 49601 ATGTCGTTGACGAAGCTGTTCATGATGCCCATCGCCTTGCTAGAGAT-CCGGTGTCTGGG 49543 Query 1254522 TGCACCTGCTTGAGCACCTTGTAGATG 1254548 || |||||||| | ||||||||||||| Sbjct 49542 TGAACCTGCTTCAACACCTTGTAGATG 49516 >seq124 Length=562620 Score = 129 bits (142), Expect = 7e-24 Identities = 152/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || || | | ||| || || || || ||||||||||| | | || Sbjct 3686 GCTTGGCCAGCTCTCCCGGAAGGATGAGACGGACAGCAGTCTGGATCTCCCTGCTCGAGA 3627 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| ||||||||||||| | |||| | |||| || |||| | Sbjct 3626 TAGTTGAGCGCTTGTTGTAGTGCGCCAGACGAGAAGACTCGCCGGCGATACGCTCGAAGA 3567 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||| ||||| |||| | |||||||| ||| |||| Sbjct 3566 TGTCGTTGACGAAGCTGTTCATGATGCCCATCGCCTTGCTAGAGATGCCGGTGTCTGGGT 3507 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | |||||||| ||||||||||||||| Sbjct 3506 GAACCTGCTTCAGCACCTTGTAGATG 3481 >seq1860 Length=50733 Score = 116 bits (128), Expect = 5e-20 Identities = 153/209 (73%), Gaps = 6/209 (3%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGC-CG 1254401 || |||||| || || | | ||| || || || |||||||||||||| | ||| || Sbjct 47666 GCTTGGCCAACTCTCCCGGAAGGATGAGACGGACAGCGGTCTGGATCTCCC---TGCTCG 47722 Query 1254402 ATCGTGTTG--CGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGA 1254459 | |||| || ||||| ||||| | | ||| | |||| | ||||||| |||| Sbjct 47723 AAATGGTTGATCGTTTGTTGTAGTGCACTAAACGAGAAGACTCGCTTGCGATGCGTTCGA 47782 Query 1254460 TCATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGG 1254519 |||||||| ||||| |||||||| | ||||| |||| |||| || ||| ||||| Sbjct 47783 AGATGTCGTTAACAAAGCTGTTCATGATCCCCATCGCCTTGCTGGAAATTCCCGTGTCGG 47842 Query 1254520 GGTGCACCTGCTTGAGCACCTTGTAGATG 1254548 |||| |||||||| || |||||||||||| Sbjct 47843 GGTGAACCTGCTTCAGAACCTTGTAGATG 47871 >seq7 Length=1178442 Score = 114 bits (126), Expect = 2e-19 Identities = 148/202 (73%), Gaps = 2/202 (1%) Strand=Plus/Minus Query 1254348 GCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGC-GCGTGCCGATCGT 1254406 || || || ||| | | ||| || || || || ||||| ||||| | || || |||||| Sbjct 128800 GCAAGCTCTCCGGGAAGGATGAGACGGACAGCCGTCTGAATCTCCCTGCTTGA-GATCGT 128742 Query 1254407 GTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTC 1254466 |||||||| ||||||||||||| | |||| | | ||||| | || ||||| Sbjct 128741 TGAACGCTTGTTGTAGTGCGCCAGACGAGAAGACTCGCCGGCAATGCGTTGGAAGATGTC 128682 Query 1254467 GTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCAC 1254526 ||| || || |||||||| ||||| |||| | |||||||| ||| || ||||| Sbjct 128681 GTTAACGAAGCTGTTCATGATTCCCATCGCCTTGCTAGAGATGCCTGTGTCTGGATGCAC 128622 Query 1254527 CTGCTTGAGCACCTTGTAGATG 1254548 |||||| ||||||||||||||| Sbjct 128621 CTGCTTCAGCACCTTGTAGATG 128600 >seq1835 Length=81178 Score = 113 bits (124), Expect = 6e-19 Identities = 133/177 (75%), Gaps = 6/177 (3%) Strand=Plus/Plus Query 1254375 ACGGCGGTCTGGATCTCGCGCGTGC-CGATCGTGTTG--CGCTTGTTCGAGTGCGCCAGA 1254431 || |||||||||||||| | ||| ||| |||| || ||||| ||||||||| | Sbjct 44967 ACAGCGGTCTGGATCTCCC---TGCTCGAAATGGTTGATCGTTTGTTGTAGTGCGCCAAA 45023 Query 1254432 CGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGACCGAC 1254491 || | |||| | ||||||| |||| |||||||| ||||| |||||||| | Sbjct 45024 CGAGAAGACTCGCTTGCGATGCGTTCGAAGATGTCGTTCACAAAGCTGTTCATGATACCC 45083 Query 1254492 ATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAGATG 1254548 |||| |||| |||| || ||| ||||||||| |||||||| || |||||||||||| Sbjct 45084 ATCGCCTTGCTGGAAATTCCCGTGTCGGGGTGAACCTGCTTCAGAACCTTGTAGATG 45140 >seq950 Length=148279 Score = 98.7 bits (108), Expect = 1e-14 Identities = 150/208 (72%), Gaps = 7/208 (3%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGC-CG 1254401 || ||||||| || ||| | | ||| || || || || ||||||||||| | ||| || Sbjct 81441 GCTTGGCCAGCTCTCCG-GAAGGATGAGACGGACAGCAGTCTGGATCTCCC---TGCTCG 81386 Query 1254402 ATCGTGTTG-CGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGAT 1254460 | |||| |||||||| ||||||||||||| | |||| || ||| || |||| Sbjct 81385 AGATAGTTGACGCTTGTTGTAGTGCGCCAGACGAGAAGACTCGCGGC-GATACGCTCGAA 81327 Query 1254461 CATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGG 1254520 ||||||||||| || |||||||| ||||| |||| | ||||| | ||| || Sbjct 81326 GATGTCGTTGACGAAGCTGTTCATGATGCCCATCGCCTTGCTAGAGATCCGGGTGTCTGG 81267 Query 1254521 GTGCACCTGCTTGAGCACCTTGTAGATG 1254548 |||||||| | ||||||||||||| Sbjct 81266 TGTAACCTGCTTCAACACCTTGTAGATG 81239 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6102249211734079