Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_022096.1 Length=258139 Score E Sequences producing significant alignments: (Bits) Value seq8179 132 8e-26 seq15960 107 3e-18 seq22299 93.3 7e-14 >seq8179 Length=4014 Score = 132 bits (146), Expect = 8e-26 Identities = 204/289 (71%), Gaps = 4/289 (1%) Strand=Plus/Plus Query 35454 GTCACACCCGTCTGGCCCTGGTATTTACCGCCGCGATCCTTGTACGAGATTTCGCAGTCC 35513 || ||||| ||| ||||| ||||| ||||| | |||||| || ||| | ||||| || Sbjct 3287 GTGACACCATGCTGTCCCTGATATTTGCCGCCTCTATCCTTATATGAGGTCTCGCATTCT 3346 Query 35514 TCGTCACTCTCGAAAAACAGCATCTGCGCCACACCTTCGTTCGCGTACACACGCGCCGGC 35573 ||||| || || || | | ||||| ||||||||||| || || | ||| ||| Sbjct 3347 TCGTCTGATTCAAAGAAAATAACTTGCGCAACACCTTCGTTAGCATATATTTTCGCTGGC 3406 Query 35574 A--GGTTGGTAGTGTTGCTGAACTCCAGAGTCACATGACCTTCCCACTCAGGTTCCAGCG 35631 | ||| || ||||| |||||||| || |||| |||||||| || ||||| | | Sbjct 3407 AACGGT--GTTGTGTTAGAAAACTCCAGCGTGACATAGCCTTCCCATTCCGGTTCAAAAG 3464 Query 35632 GCGTCACGTTGACGATGATACCACAGCGCGCGTAGGTGCTCTTACCCAAACACACCACGA 35691 | || ||||| ||||| || || || ||||| || || ||| || | ||| | || Sbjct 3465 GGGTGACGTTAACGATAATGCCGCAACGCGCATACGTTGACTTGCCAAGACAAATGGTGA 3524 Query 35692 GGACGTTGCGCGGAATGCGGAAGTATTCGACCGTGCGTGCCAGAGCGAA 35740 | ||||| || ||||||||||| || || | || ||||| | ||||| Sbjct 3525 GAACGTTCCGTGGAATGCGGAAATACTCAATGGTACGTGCTAAGGCGAA 3573 >seq15960 Length=761 Score = 107 bits (118), Expect = 3e-18 Identities = 172/247 (70%), Gaps = 0/247 (0%) Strand=Plus/Minus Query 35437 GTCACGCTTTCGGACGGGTCACACCCGTCTGGCCCTGGTATTTACCGCCGCGATCCTTGT 35496 || ||||||| || || ||||| || || ||||| ||||| | ||||| | Sbjct 372 GTTACGCTTTTGGTAACGTAACACCTTGTTGACCTTGGTACTTACCATCACGATCAGCAT 313 Query 35497 ACGAGATTTCGCAGTCCTCGTCACTCTCGAAAAACAGCATCTGCGCCACACCTTCGTTCG 35556 | || |||| || | || ||| ||| ||||||| ||| |||||||||||||| || | Sbjct 312 AAGATGTTTCACAAACTTCATCAGACTCAAAAAACAACATTTGCGCCACACCTTCATTAG 253 Query 35557 CGTACACACGCGCCGGCAGGTTGGTAGTGTTGCTGAACTCCAGAGTCACATGACCTTCCC 35616 | || | || || | || || ||| || |||| ||| ||||| ||||||| Sbjct 252 CATAAATTTTTGCAGGTAAAGGAGTCGTATTGGAAAATTCCAAAGTTACATGGCCTTCCC 193 Query 35617 ACTCAGGTTCCAGCGGCGTCACGTTGACGATGATACCACAGCGCGCGTAGGTGCTCTTAC 35676 | || ||||||||||| || ||||| || || || ||||| || || || || |||| Sbjct 192 ATTCGGGTTCCAGCGGTGTTACGTTTACAATAATGCCACAACGTGCATAAGTCGATTTAC 133 Query 35677 CCAAACA 35683 ||||||| Sbjct 132 CCAAACA 126 >seq22299 Length=503 Score = 93.3 bits (102), Expect = 7e-14 Identities = 68/79 (86%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 120228 GCCGGTATAGCTCAGCTGGTAGAGCAACTGACTTGTAATCAGTAGGTCTCGGGTTCGATC 120287 |||| ||||||||| |||||||||||||||||||||||||||||||| || |||||| Sbjct 473 GCCGCAATAGCTCAGTTGGTAGAGCAACTGACTTGTAATCAGTAGGTCCCGAGTTCGACT 414 Query 120288 CCTGATGCCGGCACCATAT 120306 | || | ||||||||||| Sbjct 413 CTTGGTTGCGGCACCATAT 395 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 825301626195480