Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq7865 122 7e-23 seq24 95.1 9e-15 >seq7865 Length=4356 Score = 122 bits (134), Expect = 7e-23 Identities = 177/248 (71%), Gaps = 3/248 (1%) Strand=Plus/Plus Query 29539 TGCACATCATTTTATCGTTGTCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCT 29598 |||| | |||||| ||| ||| || | || |||||| |||| ||||| || || || Sbjct 3348 TGCAATTAATTTTA--GTT-TCCACCACGCAGACGCAGGACCAGGTGAAGGGTAGACTCC 3404 Query 29599 TTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATC 29658 || || ||||| || || | |||||| ||| || || || ||||||||| | ||| Sbjct 3405 TTCTGGATGTTGTAGTCACTCAGAGTGCGACCATCTTCCAGCTGCTTGCCAGCAAAGATC 3464 Query 29659 AATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCT 29718 || || ||||||||||| || || |||||||||||||| | || || ||| |||| Sbjct 3465 AACCTCTGCTGATCCGGGGGGATGCCCTCTTTGTCTTGGATCTTGGCCTTCACATTTTCA 3524 Query 29719 ACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAAT 29778 | | ||| || || ||||| || || ||||| || || | |||||| ||||| Sbjct 3525 ATCGAATCACTTGCCTCGACCTCAAGGGTGATGGTTTTACCGGTGAGGGTTTTCACAAAG 3584 Query 29779 ATCTGCAT 29786 |||||||| Sbjct 3585 ATCTGCAT 3592 Score = 107 bits (118), Expect = 1e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | || |||||| || | ||||| || || || || || ||||| || || Sbjct 3594 CCACCACGCAGACGCAGGACAAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCACTC 3653 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | |||||| ||| || || || ||||||||| | ||||| || |||||||| || || Sbjct 3654 AGAGTGCGACCATCTTCCAGCTGCTTGCCAGCAAAGATCAACCTCTGCTGATCTGGGGGG 3713 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || |||||||||||||| | || || ||| |||| | | || ||||| Sbjct 3714 ATGCCCTCTTTGTCTTGGATCTTGGCCTTCACATTTTCGATTGAATCGCTTGCCTCTACC 3773 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| || || ||||| || || | |||||| ||||| |||||||| Sbjct 3774 TCAAGGGTGATGGTTTTACCGGTGAGGGTTTTCACAAAGATCTGCAT 3820 Score = 98.7 bits (108), Expect = 8e-16 Identities = 169/241 (70%), Gaps = 12/241 (5%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | || |||||| |||| ||||| || || || || || ||||| || || Sbjct 3822 CCACCACGCAGACGCAGGACCAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCACTC 3881 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | |||||| ||| || || || ||||||||| | ||||| || ||||||||||| || Sbjct 3882 AGAGTGCGACCATCTTCCAGCTGCTTGCCAGCAAAGATCAACCTCTGCTGATCCGGGGGG 3941 Query 29680 ATACCCTCTTTGTCTTGTAAT------TTTTG---TTTGACAGTTT-CTACAGTGTCAGA 29729 || ||||||||||| || | | | ||| || ||| ||| | | || ||| Sbjct 3942 ATGCCCTCTTTGTCCTGGAGTCTGGCATCTTGGCCTTCCACATTTTACGATAGGATCACT 4001 Query 29730 AAGTTCTACTTCAAGAGTTAT-AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTT 29788 ||||| | ||| || || ||| || ||||| |||||| | ||||||||||||||| Sbjct 4002 TGCCTCTACCT-AAGGGTGATAAGTCTTACCAGTGCAGGTTTCAGCAAATATCTGCATTT 4060 Query 29789 T 29789 | Sbjct 4061 T 4061 >seq24 Length=941673 Score = 95.1 bits (104), Expect = 9e-15 Identities = 96/125 (77%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 |||||||| | | ||||||||| ||||| ||||| || ||||| || || ||||||| | Sbjct 528623 CCTCCCCTGAGCCTCAGCACCAAGTGAAGAGTGGACTCCTTTTGGATATTGTAATCCGAA 528682 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||||| ||| || || ||||| || ||| |||||| | ||||||||||| ||| Sbjct 528683 AGAGTGCGTCCATCCTCCAGCTGTTTCCCGGCAAATATCAGCCGCTGCTGATCCGGAGGA 528742 Query 29680 ATACC 29684 || || Sbjct 528743 ATTCC 528747 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 384939447436767