Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_023590.1 Length=43050 Score E Sequences producing significant alignments: (Bits) Value seq2646 181 3e-41 >seq2646 Length=27379 Score = 181 bits (200), Expect = 3e-41 Identities = 253/352 (72%), Gaps = 2/352 (1%) Strand=Plus/Plus Query 35775 AACGACGAACGGTTTACCGACATCATCATGTCATAAAGTTTTGGCGTCGGGTATTTTGTT 35834 || |||| ||| |||| ||||||| |||||| || |||| || | || | ||| ||| Sbjct 17874 AATGACGTACGATTTAGCGACATCGCCATGTCGTATAGTTCAGGATTGGGTTGTTTAGTT 17933 Query 35835 AATTCGTTCCAACCGATGAAAGCGTATTCGTGCCCGTGGTACTTCCAATAATCGTCCTCA 35894 | ||||||||| || || | | | |||| || |||||||| |||||||||| ||||| Sbjct 17934 AGTTCGTTCCATCCAATATAGGGGAATTCTTGTCCGTGGTAGTTCCAATAATTTTCCTCG 17993 Query 35895 ACTTTGGCGACACGGAATAACAATTCTTCGCCTGTTTTCCAGACCCATTTTAATGATGAA 35954 ||| ||||| || | | ||||| || || ||| ||||||||||| || Sbjct 17994 TTTTTCATTACACGAAACCAAAGCTCTTCACCCGTAGGCCAAACCCATTTTAAATGGGAT 18053 Query 35955 CCCGACGCAAGGAATT-CGCACCCGTCGCCGAACTGTGGAAACCATCGTTTTGATTTAGT 36013 | || | ||||| ||| || ||| ||||| | ||||||||||||||||||| Sbjct 18054 GCGGAACTTATGAATTTCGCGCC-GTCATTAAACTGACGGAACCATCGTTTTGATTTAGA 18112 Query 36014 GATAATGTCTTCTAGGTTTTTATATTCACGGTCAAATATTACGCCACGCCAGAACGCCCC 36073 || | ||| || || |||||||| ||| | ||||| ||||| || |||||||| || Sbjct 18113 TATTAAGTCATCAAGATTTTTATACTCAAGATCAAAAATTACCCCGCGCCAGAAGTGTCC 18172 Query 36074 ATAACCCAGACCAACACGACGACGAAATCGCATTAGCTGCGTGTCGGTCTTC 36125 ||||| ||||||||| |||||||| ||||| || | |||||||||| Sbjct 18173 GTAACCAAGACCAACAAAGCGACGAAAGTACATTACTTGAGCGTCGGTCTTC 18224 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137541007670328