Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_023719.1 Length=497513 Score E Sequences producing significant alignments: (Bits) Value seq24963 161 3e-34 seq21099 156 1e-32 seq32250 134 4e-26 seq24144 104 7e-17 seq45701 87.8 6e-12 >seq24963 Length=453 Score = 161 bits (178), Expect = 3e-34 Identities = 284/414 (69%), Gaps = 0/414 (0%) Strand=Plus/Minus Query 188764 AATGTTCTTTTAGTTGGCCCTACTGGTTCAGGTAAAACATTATTTGCTCAAACATTGGCT 188823 ||| ||||| | |||| || || ||| || ||||||||||| || | || ||||| Sbjct 453 AATATTCTTCTCATTGGTCCAACGGGTAGTGGCAAAACATTATTGGCAGAGACTTTGGCG 394 Query 188824 GATATGTTACATGTACCTCTAGCTATCTCTGATGCAACTTCTTTAACAGAAGCTGGTTAT 188883 || | |||| || | | || | || ||||| | ||||| || || |||||| Sbjct 393 CGTACACTGGATGTTCCATTTACCATGGCAGACGCAACCACCTTAACTGAGGCAGGTTAT 334 Query 188884 GTAGGTGAAGATGTGGAAAACGTATTGCTTCGTTTAATCCAAGCAGCTGATTACGATATC 188943 || ||||||||||| |||||| | | | || | ||| ||| || ||| || Sbjct 333 GTTGGTGAAGATGTCGAAAACATTATTCAAAAATTGCTTCAAAAGTGTGACTATGATGTC 274 Query 188944 GAATTAGCGGAACGTGGAATTGTATATATCGATGAAGTAGATAAAATTGCTAGAAAATCA 189003 || ||| || || ||||| ||||| || ||| | || |||||| | | ||||| Sbjct 273 GATAAAGCTGAGACAGGTATTGTTTATATTGACGAAATTGACAAAATTTCACGTAAATCC 214 Query 189004 GAAAGCACATCCATTACCCGAGATGTATCTGGCGAAGGAGTACAGCAAGCTTTATTAAAA 189063 || | | || || || || ||||| || || ||||| || ||||| ||| | |||||| Sbjct 213 GACAATCCTTCTATCACGCGCGATGTTTCGGGAGAAGGCGTTCAGCAGGCTCTCTTAAAA 154 Query 189064 ATCATTGAAGGTACAGTTGCGAAAGTTCCTCCTCAAGGTGGTCGTAAACACCCTCACCAA 189123 | ||||||||||| ||||| || || || |||||||| ||||| |||||||| ||| Sbjct 153 TTAATTGAAGGTACCGTTGCTTCTGTGCCACCGCAAGGTGGACGTAAGCACCCTCAGCAA 94 Query 189124 GAAATGCTTGAAATAGATACAACTAATATCTTGTTTATTCTTGGTGGAGCGTTT 189177 ||| | | || | ||||||| ||||| | || || |||||| || ||| Sbjct 93 GAATTTTTACAAGTTGATACAAAGAATATTCTTTTCATCTGTGGTGGTGCTTTT 40 >seq21099 Length=533 Score = 156 bits (172), Expect = 1e-32 Identities = 362/533 (68%), Gaps = 11/533 (2%) Strand=Plus/Plus Query 189032 CTGGCGAAGGAGTACAGCAAGCTTTATTAAAAATCATTGAAGGTACAGTTGCGAAAGTTC 189091 |||| ||||| || || || || ||||| ||| | |||||||| || ||||| |||| Sbjct 1 CTGGTGAAGGGGTTCAACAGGCATTATTGAAATTAATTGAAGGGACTGTTGCTTCCGTTC 60 Query 189092 CTCCTCAAGGTGGTCGTAAACACCCTCACCAAGAAATGCTTGAAA-TAGATACAACTAAT 189150 |||| ||||||||| | ||||| ||||| ||||| | |||| || |||||||| | ||| Sbjct 61 CTCCACAAGGTGGTAGAAAACATCCTCAACAAGAGTT-CTTGCAAGTAGATACAGCAAAT 119 Query 189151 ATCTTGTTTATTCTTGGTGGAGCGTTTGATGGTCTTGAAAACATTATCAAGAGAC-GCGC 189209 ||| | |||||| |||||| || ||| |||| | || || | || | ||| | | Sbjct 120 ATCCTATTTATTTGTGGTGGTGCTTTTTCTGGTTTGGATAAAGTCATTC-GTGACCGTTC 178 Query 189210 TACAAAATCAACTTTAGGTTTTGATGATAGTGTAGATAAAGTACAAGAAGAAATCAAGGA 189269 | ||| | | ||||||| || | ||| ||||| | || ||| | | | | Sbjct 179 TGAGAAAGGTGGTATTGGTTTTGGTGCTGAAGTAAG--AAGTA-AGGATGAAGT-ACGTA 234 Query 189270 TGACA-ATAAAGT-ATTCCAACATCTTCAACCGCAAGATATTGTTAAGTATGGTTTAATT 189327 || || |||| ||| | ||||| || | | ||| | ||| || || || ||| Sbjct 235 AAGCACATGAAGTTATTACTG-ATCTTGAAGCCGATGATTTGATTACATACGGCTTGATT 293 Query 189328 CCAGAATTTATTGGGCGTGTACCAGTAATCGCAACTCTTAACAAACTTGATCGAGATGCA 189387 |||||||| |||| ||| | ||||| | |||||| | | |||| ||| |||||| Sbjct 294 CCAGAATTCGTTGGTCGTTTGCCAGTGGTTGCAACTTTAGAAGAACTCGATGAAGATGCG 353 Query 189388 TTGATTAACATTTTAACTGAGCCGCAAAACGCTATCATTAAACAATATCAGAAATTGTTA 189447 || ||| ||| ||||||||||| | || ||| | | ||| || || ||| || | Sbjct 354 TTAGTTACTATTCTAACTGAGCCGAAGAATGCTTTAAGTAAGCAGTACGGAAAAATGATT 413 Query 189448 GATATGGATGGCGTGGAATTAGAATTCCAAAAAGAAGCATTAGAATCAATTGCAGATGAA 189507 || ||||| || |||||||| | ||||||||||| | | || || | || Sbjct 414 GAAATGGAAGGAAGTGAATTAGAGCTAAGGGAAGAAGCATTACACGCTATCGCGAAAAAA 473 Query 189508 GCGATTGAACGTAATACTGGTGCTCGCGGATTACAATCCATTATTGAAAATAT 189560 ||||| || || || || ||||| || || || | |||| | |||||||| Sbjct 474 GCGATGGAGCGCAAAACAGGTGCACGTGGTTTGCGCACCATACTAGAAAATAT 526 >seq32250 Length=362 Score = 134 bits (148), Expect = 4e-26 Identities = 228/328 (70%), Gaps = 8/328 (2%) Strand=Plus/Minus Query 188854 GATGCAACTTCTTTAACAGAAGCTGGTTATGTAGGTGAAGATGTGGAAAACGTATTGCTT 188913 |||||||| | ||||| ||||| |||||||| |||||||| || ||||| ||| | | Sbjct 327 GATGCAACAACCTTAACTGAAGCCGGTTATGTTGGTGAAGACGTTGAAAA--TAT--CAT 272 Query 188914 CGTTTAATCCAAGCAGC----TGATTACGATATCGAATTAGCGGAACGTGGAATTGTATA 188969 | || |||| |||||||||| | || |||| | || || || || Sbjct 271 CCAAAAACTGTTGCAGAAATGTGATTACGATGTGGATAAAGCGCAGACAGGTATCGTTTA 212 Query 188970 TATCGATGAAGTAGATAAAATTGCTAGAAAATCAGAAAGCACATCCATTACCCGAGATGT 189029 |||||| || |||||||||| || | || ||||| | | || || ||| ||||||| Sbjct 211 TATCGACGAGATAGATAAAATATCTCGCAAGTCAGACAATCCTTCTATCACCAGAGATGT 152 Query 189030 ATCTGGCGAAGGAGTACAGCAAGCTTTATTAAAAATCATTGAAGGTACAGTTGCGAAAGT 189089 ||||| || || || || || || | | ||| | |||||||| ||||| || || Sbjct 151 TTCTGGTGAGGGCGTGCAACAGGCACTGCTGAAACTGATTGAAGGCACAGTCGCTTCTGT 92 Query 189090 TCCTCCTCAAGGTGGTCGTAAACACCCTCACCAAGAAATGCTTGAAATAGATACAACTAA 189149 || || || |||||||||||||| || || |||||| | || | |||| || | || Sbjct 91 ACCACCACAGGGTGGTCGTAAACATCCACAGCAAGAATTCCTACAGGTAGACACGGCAAA 32 Query 189150 TATCTTGTTTATTCTTGGTGGAGCGTTT 189177 |||||| ||||| ||| || || ||| Sbjct 31 TATCTTATTTATCTGTGGCGGCGCTTTT 4 >seq24144 Length=466 Score = 104 bits (114), Expect = 7e-17 Identities = 99/127 (78%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 188777 TTGGCCCTACTGGTTCAGGTAAAACATTATTTGCTCAAACATTGGCTGATATGTTACATG 188836 |||| |||||||||||||||||||| || ||||| | || ||||| ||||| ||| Sbjct 272 TTGGACCTACTGGTTCAGGTAAAACCTTGCTTGCTGAGACTTTGGCAAGGTTGTTAGATG 331 Query 188837 TACCTCTAGCTATCTCTGATGCAACTTCTTTAACAGAAGCTGGTTATGTAGGTGAAGATG 188896 | ||| | | ||| |||||||||| | | || |||||||||||||| |||||||| | Sbjct 332 TGCCTTTCACAATCGCTGATGCAACCACGCTTACTGAAGCTGGTTATGTTGGTGAAGACG 391 Query 188897 TGGAAAA 188903 | ||||| Sbjct 392 TTGAAAA 398 >seq45701 Length=265 Score = 87.8 bits (96), Expect = 6e-12 Identities = 93/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 46584 TTGTTTTTAGACGAAATACATCGTTTCAATAAAGGACAGCAAGATTCGTTATTACCTTAT 46643 |||||| | || ||| |||| ||||| ||||| | |||||||||| | || || || | Sbjct 55 TTGTTTGTCGATGAAGTACACCGTTTTAATAAGGCACAGCAAGATGCTTTTTTGCCGCAC 114 Query 46644 GTTGAAGATGGAACAATTACGTTAATTGGTGCAACAACTGAAAATCCATTTTTTGAAATT 46703 || ||| |||| || | | |||||||||||||| |||||||| || | |||||| | Sbjct 115 GTAGAAAATGGTACCTTCTCCTTAATTGGTGCAACCACTGAAAACCCTTCGTTTGAATTA 174 Query 46704 AAC 46706 ||| Sbjct 175 AAC 177 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1590695042573376