Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_024146.1 Length=56702 Score E Sequences producing significant alignments: (Bits) Value seq2646 154 5e-33 seq5218 89.7 2e-13 >seq2646 Length=27379 Score = 154 bits (170), Expect = 5e-33 Identities = 234/330 (71%), Gaps = 6/330 (2%) Strand=Plus/Minus Query 33493 ATTTTATATCATGGTACTCGTGGCCCTGGAAAGACCGATGCTCAGTTGATGCGTTTTCGT 33552 ||| | ||| | || ||| | || || || |||||||| ||||| | ||| |||||| Sbjct 18253 ATTCTTTATGAAGGGACTAGGGGGCCGGGGAAGACCGACGCTCAAGTAATGTACTTTCGT 18194 Query 33553 CGTTATGTTGGCATGGGGTATGGTAAACACTGGCGCGGTATCATTTTTGACCGAGAATAC 33612 || | |||||| | || || || | ||||||||| | |||||||| | || || Sbjct 18193 CGCTTTGTTGGTCTTGGTTACGGACACTTCTGGCGCGGGGTAATTTTTGATCTTGAGTAT 18134 Query 33613 AAAAACTTAGATGACTTAGTTGCAAAGTCACAGCGTTGGTTTCCTGAATTTAATGATGGT 33672 ||||| | ||||||||| | | || ||| | || ||||| | | | |||||||| || Sbjct 18133 AAAAATCTTGATGACTTAATATCTAAATCAAAACGATGGTTCCGTCAGTTTAATGACGGC 18074 Query 33673 TGTAAATTCTTATCTTCCAAGTCAGATTATAAATGGGTATGGCCTAGCGGCGAAGAACTA 33732 |||||| || |||| || ||| |||||||| ||||||| || ||||| || Sbjct 18073 GCGAAATTCATAAGTTCCGCATCCCATTTAAAATGGGTTTGGCCTACGGGTGAAGAGCTT 18014 Query 33733 ATGTTCCGTGTTGCTAAAAAACCTAAGGA---TTACTGGCTGTACCACGGTCAGGAATTT 33789 ||| ||||| | |||||| |||| ||| ||| |||||||| || ||||| Sbjct 18013 TGGTTTCGTGTAA-TGAAAAACG--AGGAAAATTATTGGAACTACCACGGACAAGAATTC 17957 Query 33790 CCATTTATTGGATGGAACGAATTAACTAAA 33819 || | |||||||||||||||| |||||||| Sbjct 17956 CCCTATATTGGATGGAACGAACTAACTAAA 17927 >seq5218 Length=8244 Score = 89.7 bits (98), Expect = 2e-13 Identities = 88/114 (77%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 7973 ATTGGACGTATAGTTTGTATCACATCCTGGGCATTGCAAATTACAACCAGCTAATCGAAC 8032 ||||| || || | |||||||||||||| ||||| || || ||||| |||| |||| Sbjct 7904 ATTGGTGGTGTATTCGGTATCACATCCTGGACATTGTAAGTTGCAACCGCCTAAACGAAT 7963 Query 8033 AAACACGGCAGGTTGACCACAAAATGGGCCTTCGCCTTGAATGGTATGAAAAAT 8086 || | ||||||||||||||| | ||||||||||| || || || |||||| Sbjct 7964 GAAAATAGCAGGTTGACCACAATAAGGGCCTTCGCCCTGTATTGTGGAAAAAAT 8017 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 181196495364816