Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_024329.1 Length=39425 Score E Sequences producing significant alignments: (Bits) Value seq53845 136 1e-27 seq33220 111 4e-20 seq23389 105 2e-18 seq29974 104 6e-18 seq42125 89.7 1e-13 >seq53845 Length=225 Score = 136 bits (150), Expect = 1e-27 Identities = 153/205 (75%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 38631 GGTGATGACAAAGGTGTAACAATTTGTATGGGCGGTAAGCGCACATTGAAGATCGGTGAC 38690 ||||||||| | || ||||| || | || ||||| || ||| |||| ||||||||| Sbjct 205 GGTGATGACCACGGCGTAACCGTTCTAGTTGGTGGTAAACGTACACTGAAAATCGGTGAC 146 Query 38691 TTATTCGGCACAGTTGTTGTTCCATTTATGAAGCTTGAGACAGAAGAAGATTATGAAGCA 38750 || | || || |||||| | ||||| | ||| | || || ||||||||||| ||| Sbjct 145 CTAATGGGTACTGTTGTTATCCCATTCAAGAAAATGGAAACCGAAGAAGATTACGAAAGC 86 Query 38751 ATCGAAGAATTAGCAGGAGAAGTTATCGACTTCTTTGCTGAGAATGCACTAGAGCACGAA 38810 | | |||||||| | |||| | || || |||| ||||| |||| || ||||||||| Sbjct 85 CTTGTTGAATTAGCTGAAGAAATGATTGATTTCTGGGCTGAAAATGGCCTTGAGCACGAA 26 Query 38811 AGAACTGGTGAGATGATTGAGCGTA 38835 | |||||||| ||||||||||||| Sbjct 25 CGTACTGGTGAAATGATTGAGCGTA 1 >seq33220 Length=352 Score = 111 bits (122), Expect = 4e-20 Identities = 94/116 (81%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 38631 GGTGATGACAAAGGTGTAACAATTTGTATGGGCGGTAAGCGCACATTGAAGATCGGTGAC 38690 ||||||||||||||||| || || ||||| |||||||| || |||||||||||||| Sbjct 231 GGTGATGACAAAGGTGTGACGATCCTCATGGGTGGTAAGCGTACTCTGAAGATCGGTGAC 290 Query 38691 TTATTCGGCACAGTTGTTGTTCCATTTATGAAGCTTGAGACAGAAGAAGATTATGA 38746 || | || || ||||| || ||||| |||||||| || ||||||||||| || || Sbjct 291 TTGATGGGTACTGTTGTGGTGCCATTCATGAAGCTGGATACAGAAGAAGACTACGA 346 >seq23389 Length=480 Score = 105 bits (116), Expect = 2e-18 Identities = 278/417 (67%), Gaps = 13/417 (3%) Strand=Plus/Plus Query 38160 GGTGGTGCGGGCCCTGCTGTTAGAACTGGTATGTCATGTGTTGGTGCGGCACGTTGTGAA 38219 |||||||| || || ||| | || | |||||| || || || || ||||||||||| Sbjct 31 GGTGGTGCTGGTCCATGTGTACGTACGGCTATGTCTTGCGTAGGCGCTTCACGTTGTGAA 90 Query 38220 ATGTCAAATACAAACGAGCAAGCGGCTTTACGCACA-TTGGTTAATGCTTTCCTTGATGA 38278 ||||| | |||||||||| | | || || || ||||| || ||| |||||| Sbjct 91 ATGTCTTGTGCAAACGAGCACG-GTATTCACCGTCACTTGGTAAACAACTTCACTGATGA 149 Query 38279 CATGCACAGACCTGCATTACCATACAAAATGAAGTTTAAAGTTTCTGGTTGTGCAAACGA 38338 | || | ||||| ||||| |||||| | || || |||||||||||||| | ||||| Sbjct 150 TGTACATCGTCCTGCTTTACCGTACAAATTCAAATTCAAAGTTTCTGGTTGCCCTAACGA 209 Query 38339 CTGTATGAACTCAATTGAGCGTTCAGACTTTGCAACAATAGGAACTTGGAGAGATGATAT 38398 ||| || |||| |||||| | || | || | || || || ||| | || || || Sbjct 210 TTGTCAAAATGCAATCGAGCGTGCTGATATGGCTATTATCGGTACATGGCGCGACGACAT 269 Query 38399 TAAAATCAACCAAG-ACTTGTGGAAAGC--AATGGTTGCA------GATAAGGGCATGGA 38449 ||| | | |||| | || ||| | || | ||| || || || | Sbjct 270 GAAAGTTGATCAAGAAGAAGTTAAAAACTACATCGAAGCAAAAGGTGAAAACGGTCGTCA 329 Query 38450 CTATGTTGTTGATAACATTACTTCTCGTTGTCCTACGCAATGTATGA-CTGTTAATGCTG 38508 || | |||||||| || ||| ||||| || || |||| || | | |||| | | Sbjct 330 ATACTATCTTGATAACGTTGTTTCACGTTGCCCAAC-AAATGCATTAGCACTTAACGAAG 388 Query 38509 ATACTTCTCTTACTATTGATAACCGAAACTGTGTTAAATGTATGCACTGTTTAAACG 38565 | | | || || |||||||||| ||||||||| |||||||| || ||||||| Sbjct 389 ACAACACACTAGCTGTTGATAACCGTAACTGTGTTCGTTGTATGCATTGCTTAAACG 445 >seq29974 Length=385 Score = 104 bits (114), Expect = 6e-18 Identities = 203/288 (70%), Gaps = 14/288 (5%) Strand=Plus/Minus Query 38062 CATTCCACGGTCAGTCTGGTGACATTATGTTCCAAGGAGCAACA---GAAAAGACAACGC 38118 |||||||||||||| ||||| |||| |||||| || | || |||||||| | Sbjct 297 CATTCCACGGTCAGACTGGTAACATCATGTTCATCGGTACGACGACTGAAAAGACT---C 241 Query 38119 AA-ACTATTTTTAACGAGCTTAACGAGATTGGCTTTGATATGGGTGGTGCGGGCCCTGCT 38177 || ||| | ||| ||||| | || | || | || | ||||||||||| ||| | Sbjct 240 AACACT-TCTTTGACGAGATCAATGCATACGGTTGGGACTTAGGTGGTGCGGGTCCTTGT 182 Query 38178 GTTAGAACTGGTATGTCATGTGTTGGTGCGGCACGTTGTGAAATGTCAAATACAAACGAG 38237 || | |||| ||||||||||| || || |||| ||||| ||||| || ||||| Sbjct 181 GTACGTACTGCAATGTCATGTGTCGGCGCTTCACGCTGTGAGATGTCTTGCACCAACGAA 122 Query 38238 CAAGCGGCTTTA-CG-CACATTGGTTAATG-CTTTCCTTGATGACATGCACAGACCTGCA 38294 || | | ||| | || ||| | ||| || |||| || |||||| | ||| | || || Sbjct 121 CATG-GTCTTCATCGTCACCT-GGTAAACAACTTTACT-GATGACGTTCACCGTCCAGCT 65 Query 38295 TTACCATACAAAATGAAGTTTAAAGTTTCTGGTTGTGCAAACGACTGT 38342 | |||||||| | || || ||||||||||||||| | ||||| ||| Sbjct 64 CTTCCATACAAGTTCAAATTCAAAGTTTCTGGTTGTCCTAACGATTGT 17 >seq42125 Length=286 Score = 89.7 bits (98), Expect = 1e-13 Identities = 151/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 38154 GATATGGGTGGTGCGGGCCCTGCTGTTAGAACTGGTATGTCATGTGTTGGTGCGGCACGT 38213 ||| | || ||||| ||||| ||| | || |||||||| ||||| ||| ||||||| Sbjct 226 GATCTAGGGGGTGCAGGCCCCTGTGTGCGTACGGGTATGTCTTGTGTCGGTATGGCACGT 167 Query 38214 TGTGAAATGTCAAATACAAACGAGCAAGCGGCTTTACGCACATTGGTTAATGCTTTCCTT 38273 ||||||||||| || || ||||| || || ||| | ||| ||| Sbjct 166 TGTGAAATGTCTAACTGTAATGAGCACGCTATCCATCGTCGTTTGATGAATAACTTCACA 107 Query 38274 GATGACATGCACAGACCTGCATTACCATACAAAATGAAGTTTAAAGTTTCTGGTTGTGCA 38333 ||||| | || | || || || || || || | || |||||||||||||| || | Sbjct 106 GATGATGTTCATCGTCCAGCGTTGCCTTATAAGTTTAAATTTAAAGTTTCTGGCTGCCCT 47 Query 38334 AACGACTGTATGAACTCAATTGAGCGTTCAGACTTTGCA 38372 || |||||| || | ||||||||||| ||||||||| Sbjct 46 AATGACTGTCAAAATGCTATTGAGCGTTCTGACTTTGCA 8 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 125949215779578