Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq1300 158 2e-33 seq7865 125 1e-23 seq24 93.3 8e-14 >seq1300 Length=83366 Score = 158 bits (174), Expect = 2e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 ||||| | || ||||||||| | ||| |||||||| || ||||| || || || || || Sbjct 7890 CCTCCACGCAGACGCAGAACCAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAC 7831 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 ||| | | || ||||| || || ||||| || ||||| || | |||||||| || || Sbjct 7830 AGAGTGCGGCCATCTTCCAGCTGCTTTCCGGCGAAGATCAGGCGCTGTTGATCCGGGGGG 7771 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 ||||| ||||| || || || || || || || |||||||| | ||| | |||||| Sbjct 7770 ATTCCCTCCTTGTCCTGGATTTTGGCCTTCACGTTTTCAATGCTGTCAGATGCCTCTACT 7711 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||| || || ||||| || |||| ||||||||||| |||||||| Sbjct 7710 TCCAAGGTGATGGTCTTACCAGTCAGGGTCTTTACAAAGATCTGCAT 7664 >seq7865 Length=4356 Score = 125 bits (138), Expect = 1e-23 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || || | || |||||| || | ||| || ||||| || ||||| || || || ||| Sbjct 3366 CCACCACGCAGACGCAGGACCAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCACTC 3425 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 ||| | | ||| ||||| || || || ||||||||||| | || || ||||| || || Sbjct 3426 AGAGTGCGACCATCTTCCAGCTGCTTGCCAGCAAAGATCAACCTCTGCTGATCCGGGGGG 3485 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || || || || ||||| ||||| || || ||||||||||||| |||| | | || || Sbjct 3486 ATGCCCTCTTTGTCTTGGATCTTGGCCTTCACATTTTCAATCGAATCACTTGCCTCGACC 3545 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || | || || || || || || | || || ||||| |||||||| Sbjct 3546 TCAAGGGTGATGGTTTTACCGGTGAGGGTTTTCACAAAGATCTGCAT 3592 Score = 122 bits (134), Expect = 2e-22 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || || | || |||||| || | ||| || ||||| || ||||| || || || ||| Sbjct 3594 CCACCACGCAGACGCAGGACAAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCACTC 3653 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 ||| | | ||| ||||| || || || ||||||||||| | || || |||||||| || Sbjct 3654 AGAGTGCGACCATCTTCCAGCTGCTTGCCAGCAAAGATCAACCTCTGCTGATCTGGGGGG 3713 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || || || || ||||| ||||| || || |||||||| || | ||| | | ||||| Sbjct 3714 ATGCCCTCTTTGTCTTGGATCTTGGCCTTCACATTTTCGATTGAATCGCTTGCCTCTACC 3773 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || | || || || || || || | || || ||||| |||||||| Sbjct 3774 TCAAGGGTGATGGTTTTACCGGTGAGGGTTTTCACAAAGATCTGCAT 3820 >seq24 Length=941673 Score = 93.3 bits (102), Expect = 8e-14 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 82707 CCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCC 82766 ||||||||||||||||||||||| |||||||||||||| ||| | ||||| || || Sbjct 529493 CCTTCCTTATCTTGAATCTTTGCCTTTACATTTTCAATGCAGTCACTGGGTTCAACCTCA 529552 Query 82767 AAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | || || ||||| || || | ||||| ||||| |||||||| Sbjct 529553 AGGGTGATGGTCTTTCCAGTAAGAGTCTTCACAAAGATCTGCAT 529596 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981077615739993