Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_024451.1 Length=220222 Score E Sequences producing significant alignments: (Bits) Value seq43512 210 3e-49 seq28891 113 6e-20 >seq43512 Length=277 Score = 210 bits (232), Expect = 3e-49 Identities = 214/278 (77%), Gaps = 1/278 (0%) Strand=Plus/Plus Query 82571 TAGATACATCTTTTAAAAAGAAAGAATTGTTTAGATTTGATTCAAAAAATGTTACTTACA 82630 |||||| ||||| |||||||| |||||||| |||||| || || | | ||| | Sbjct 1 TAGATAACTCTTTAAAAAAGAAC-AATTGTTTGAATTTGAGCACAATAACATCATTTATA 59 Query 82631 AAGTAATTATTGGAGGAAGAATAGATGGCTATGTCGACGAATCAACTATCCTTGAAACAA 82690 || |||| |||||||||||||||||||| ||||| ||||| | || ||||||||||||| Sbjct 60 AAATAATAATTGGAGGAAGAATAGATGGTTATGTTAACGAAACCACAATCCTTGAAACAA 119 Query 82691 AACACAGAAGAAACCGGTTATTTGGCTTTATACCCAAATATGAGATGGTTCAGATAGAAA 82750 |||| |||||| | |||||||| |||||||| ||||||| ||||| || || |||| Sbjct 120 AACATAGAAGAGATAGGTTATTTAATTTTATACCAGAATATGAAATGGTACAAATGGAAA 179 Query 82751 TGTATCTGCATATTTTAAATTTaaaaaaaTGCCTACACGTTGAAAACTACAATGGATTGC 82810 ||||||| ||||| | ||||||||||||| | || |||||||| | | | ||| | Sbjct 180 TGTATCTTTATATTCTTGATTTAAAAAAATGTATTCATGTTGAAAATTTTCAAGAATTAC 239 Query 82811 AGAATAAAACAGAGTATGCCCAAAACGATACCTTTTTA 82848 | |||| ||| || |||| || || ||| ||||||| Sbjct 240 AAAATATAACTGAATATGTTCACAATGATGTCTTTTTA 277 >seq28891 Length=398 Score = 113 bits (124), Expect = 6e-20 Identities = 104/131 (79%), Gaps = 2/131 (2%) Strand=Plus/Minus Query 77265 TTTCCATTAGTTGTCAGTGGACATATTCACAGCGAACAGAAGCCTCAACGAAATATATTT 77324 ||||||||||| | ||||||||||| || || ||||| |||||| |||||| ||| Sbjct 384 TTTCCATTAGTGATTAGTGGACATATACATAGTGAACAACGACCTCAAAAAAATATTTTT 325 Query 77325 TATCCTGGTAGTGTAATTCAACACGCCTTTGGGGAAAGCGAAAACAATGGATTATTGTTA 77384 ||||| || ||||| |||||||| || ||||| ||||| ||| | ||||| ||||| ||| Sbjct 324 TATCCAGGAAGTGTTATTCAACATGCATTTGGAGAAAGTGAAGATAATGGTTTATTATTA 265 Query 77385 ATAACATTTTT 77395 || |||||| Sbjct 264 TTA--ATTTTT 256 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 704057600606640