Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq7865 89.7 3e-13 seq24 87.8 1e-12 seq1300 86.0 4e-12 >seq7865 Length=4356 Score = 89.7 bits (98), Expect = 3e-13 Identities = 137/193 (71%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 33558 CTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAA 33617 ||| || || |||||||| || || ||||| | || |||| || || || ||||| Sbjct 3629 CTCCTTCTGGATGTTGTAGTCACTCAGAGTGCGACCATCTTCCAGCTGCTTGCCAGCAAA 3688 Query 33618 AATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACAT 33677 ||||| | |||||||||| | || | || |||||||| || || |||| ||| Sbjct 3689 GATCAACCTCTGCTGATCTGGGGGGATGCCCTCTTTGTCTTGGATCTTGGCCTTCA-CAT 3747 Query 33678 AGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTA 33736 || | | ||||||| || || |||| ||||| |||||||| || | ||||| | Sbjct 3748 TTTCGATTGAATCGCTTGCCTCTACCTCAAGGGTGATGGTTTTACCGGTGAGGGTTTTCA 3807 Query 33737 CAAAGATCTGCAT 33749 ||||||||||||| Sbjct 3808 CAAAGATCTGCAT 3820 Score = 84.2 bits (92), Expect = 1e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | || ||| | |||| || || || ||| || || |||||||| || Sbjct 3366 CCACCACGCAGACGCAGGACCAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCACTC 3425 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| | || |||| || || || ||||| ||||| | ||||||||| | || Sbjct 3426 AGAGTGCGACCATCTTCCAGCTGCTTGCCAGCAAAGATCAACCTCTGCTGATCCGGGGGG 3485 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCACG-GTGTCGCTTGATTCCAC 33701 | || |||||||| || || |||| ||| ||| | || |||| || || Sbjct 3486 ATGCCCTCTTTGTCTTGGATCTTGGCCTTCA-CATTTTCAATCGAATCACTTGCCTCGAC 3544 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 |||| ||||| |||||||| || | ||||| |||||||||||||| Sbjct 3545 CTCAAGGGTGATGGTTTTACCGGTGAGGGTTTTCACAAAGATCTGCAT 3592 >seq24 Length=941673 Score = 87.8 bits (96), Expect = 1e-12 Identities = 77/96 (80%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 33540 CACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTC 33599 |||||| || |||||| ||| ||||| || |||||||| || || |||||| | || || Sbjct 528640 CACCAAGTGAAGAGTGGACTCCTTTTGGATATTGTAATCCGAAAGAGTGCGTCCATCCTC 528699 Query 33600 CAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATC 33635 || ||||| |||||||| |||| ||||||||||| Sbjct 528700 CAGCTGTTTCCCGGCAAATATCAGCCGCTGCTGATC 528735 >seq1300 Length=83366 Score = 86.0 bits (94), Expect = 4e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || || | || ||| | |||| || ||||| ||| || || |||||||| ||||| Sbjct 7890 CCTCCACGCAGACGCAGAACCAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAC 7831 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| | || |||| || |||||||| || |||| ||||| ||||| | || Sbjct 7830 AGAGTGCGGCCATCTTCCAGCTGCTTTCCGGCGAAGATCAGGCGCTGTTGATCCGGGGGG 7771 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCACGG-TGTCGCTTGATTCCAC 33701 | || || ||||| ||||| |||| | | ||| | |||| || || || Sbjct 7770 ATTCCCTCCTTGTCCTGGATTTTGGCCTTCA-CGTTTTCAATGCTGTCAGATGCCTCTAC 7712 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || | ||||| || ||||| || | || |||||||||||||||||| Sbjct 7711 TTCCAAGGTGATGGTCTTACCAGTCAGGGTCTTTACAAAGATCTGCATA 7663 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328465289711040