Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq1300 123 6e-23 seq7865 95.1 3e-14 >seq1300 Length=83366 Score = 123 bits (136), Expect = 6e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| || || || || || || || ||||| |||||||| || |||||| Sbjct 7667 CAGATCTTTGTAAAGACCCTGACTGGTAAGACCATCACCTTGGAAGTAGAGGCATCTGAC 7726 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 | | ||| || ||| || || || || || || ||||| ||||| || Sbjct 7727 AGCATTGAAAACGTGAAGGCCAAAATCCAGGACAAGGAGGGAATCCCCCCGGATCAACAG 7786 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || |||||||||||||||||| |||||||||| | ||| || |||| |||||| || Sbjct 7787 CGCCTGATCTTCGCCGGAAAGCAGCTGGAAGATGGCCGCACTCTGTCCGACTACAACATC 7846 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 ||||| ||||||||||||||||| ||| || | || || Sbjct 7847 CAGAAGGAGTCTACTCTTCACCTGGTTCTGCGTCTGCG 7884 Score = 109 bits (120), Expect = 1e-18 Identities = 87/105 (83%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811 || || | || ||| ||||||||||||||||| ||||||| || ||||| | || ||| Sbjct 7884 CGCAGACGCAGAACCAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGACAGAGTG 7825 Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 | ||||||||||||||||||||||||||||| || || |||||| Sbjct 7824 CGGCCATCTTCCAGCTGCTTTCCGGCGAAGATCAGGCGCTGTTGA 7780 Score = 107 bits (118), Expect = 5e-18 Identities = 143/199 (72%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 ||| || || || || || || ||||| || ||||| || |||||| | ||| Sbjct 7906 CAAGACCCTGACTGGCAAGACCATCACCTTAGAAGTAGAGGCATCTGACTGCATTGAAAA 7965 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||| || || || || || || ||||| ||||| || | || ||||| Sbjct 7966 CGTGAAGGCCAAAATCCAGGACAAGGAGGGAATCCCCCCGGATCAACAGCGCCTGATCTT 8025 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 ||||||||| ||| |||||||||| | ||| || |||| |||||| ||||||| ||||| Sbjct 8026 CGCCGGAAAACAGCTGGAAGATGGCCGCACTCTGTCCGACTACAACATCCAGAAGGAGTC 8085 Query 206364 TACTCTTCACCTTGTTTTG 206382 |||||||||||| ||| || Sbjct 8086 TACTCTTCACCTGGTTCTG 8104 Score = 104 bits (114), Expect = 6e-17 Identities = 81/97 (84%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 204760 CAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATC 204819 || ||| ||||||||||||||||| ||||||| || ||||| | || ||| | ||||| Sbjct 8104 CAGAACCAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCATC 8045 Query 204820 TTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 ||||||||| |||||||||||||| || || |||||| Sbjct 8044 TTCCAGCTGTTTTCCGGCGAAGATCAGGCGCTGTTGA 8008 >seq7865 Length=4356 Score = 95.1 bits (104), Expect = 3e-14 Identities = 147/209 (70%), Gaps = 6/209 (3%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGA---AAGTTCT 206229 ||||| ||| ||||| ||||| || ||||| ||||| | || || || ||| Sbjct 3817 CAGATCTTTGTGAAAACCCTCACCGGTAAAACCATCACCCTTGAGGTAGAGGCAAGC--- 3761 Query 206230 GACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCT 206289 || || ||||| || ||| ||||| ||||| ||||| || || || || Sbjct 3760 GATTCAATCGAAAATGTGAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCAGATCAG 3701 Query 206290 CAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAAC 206349 || || | ||||| || || |||||| |||||||||| | ||| || || |||||| Sbjct 3700 CAGAGGTTGATCTTTGCTGGCAAGCAGCTGGAAGATGGTCGCACTCTGAGTGACTACAAC 3641 Query 206350 GTCCAGAAAGAGTCTACTCTTCACCTTGT 206378 ||||||| |||||||| ||||||||||| Sbjct 3640 ATCCAGAAGGAGTCTACCCTTCACCTTGT 3612 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1180918528938627