Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq117 199 6e-45 seq246 127 3e-23 seq124 127 3e-23 seq1860 114 2e-19 seq950 109 8e-18 seq7 107 3e-17 >seq117 Length=549210 Score = 199 bits (220), Expect = 6e-45 Identities = 218/290 (75%), Gaps = 0/290 (0%) Strand=Plus/Minus Query 259896 TGTCGCAGCAGTTGTTCACCTCAGCGACGCCCACGCTCTTTAATGCCGGCACGCCGCGCC 259955 ||||| || ||| |||||| ||| |||| |||||||| || |||||||||||||| | Sbjct 313907 TGTCGGAGAAGTGGTTCACGCACGCGTCGCCGACGCTCTTCAACGCCGGCACGCCGCGTC 313848 Query 259956 CGCAGAATTCGTCGTGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCTATG 260015 ||||| || ||||| ||| || ||||||| ||| |||||||||||||| | Sbjct 313847 CGCAGCTCTCCAGCTGCTTCCTGCTGACGATGAAGGACGACAGCATCGAGGGCATCTACG 313788 Query 260016 ACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGCAC 260075 ||||||| ||| | ||||||||||| || ||| | || || |||||||| | | || Sbjct 313787 ACACGCTGAAGGAATGCGCGCTCATATCGAAGTCCGCAGGAGGCATCGGCGTCAACATAC 313728 Query 260076 ACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCCTTG 260135 |||| | |||||| |||| |||| | || |||||||||||| || |||||||| Sbjct 313727 ACAACATCCGCGCCTCGGGAAGCTACATCGCCGGCACCAACGGCTGCTCGAACGGCCTCC 313668 Query 260136 TGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTACGTCGACCAGTGC 260185 | |||||||| || || || || |||||||| | |||||||||||| || Sbjct 313667 TTCCCATGCTGCGAGTCTTCAATAACACGGCGAGGTACGTCGACCAGGGC 313618 Score = 174 bits (192), Expect = 2e-37 Identities = 337/495 (68%), Gaps = 8/495 (2%) Strand=Plus/Minus Query 262915 CATGGCCTGCGCAACTCGTTGCTCGTGGCGCTCATGCCCACGGCCACGACGTCGCAGATC 262974 || ||| | |||||| |||| | |||| ||||| || || ||||| | |||||| Sbjct 312714 CACGGCGTCCGCAACAGCCTGCTGCTCGCGCCGATGCCGACCGCGTCGACGGCACAGATC 312655 Query 262975 CTGGGCAACACCGAGGCGTTCGAGGTCATCACGAGCAACATCTACACGCGCCGCGTGCTC 263034 || ||||||| ||| || |||||| |||||||||||||||| |||| ||||||||| Sbjct 312654 CTCGGCAACAATGAGTCGATCGAGGCGTACACGAGCAACATCTACTCGCGGCGCGTGCTC 312595 Query 263035 TCGGGCGACTTTACCGTGGTCAACCGCCACCTGGTCAAGCGCATGGTGGCGCGCGGCCTG 263094 || ||||| || | ||||||| ||||||| | ||| | | | | |||||||| Sbjct 312594 TCCGGCGAGTTCCAGATCGTCAACCACCACCTGCTGAAGGACCTCACCGAGTGCGGCCTG 312535 Query 263095 T-GGACGCCCGACTTTCGCGACCGGCTCATTGCGGCACAGGGCTCGGTGCAGGGCTTTGA 263153 | ||||| || || | |||| |||| || | | ||||| || ||| | Sbjct 312534 TGGGACGACC-ACATGAAGAACCGCATCATCGCCGAGAACGGCTCCGTTCAG------AA 312482 Query 263154 CGACGAGGAGGTGCCGCCCGATCTCAAGGCTCTCTTCAAGACCGTGTGGGAGGTGCCCAA 263213 || ||||||| | ||| ||| || ||| |||| ||||||||| |||||| | | | Sbjct 312481 CGTCGAGGAGATCCCGGACGACCTGAAGCAGCTCTACAAGACCGTCTGGGAGATCTCGCA 312422 Query 263214 CCGGGTGACCATTGATATGGCGGCCGACCGCGCGCCCTATGTCGACCAGAGCCAGTCGCT 263273 | || || | ||||| ||||| |||| ||| |||||||||| ||||| || Sbjct 312421 GAAGACGATAATCAACATGGCTGCCGATCGCGGCGCCTTCATCGACCAGAGTCAGTCACT 312362 Query 263274 CAACCTGTACCTCGCCGACCCGACGGCCGAGAGCATCACGTCGATGCACGCCTATGCGTG 263333 || | |||||||||| |||| || | | || |||||| ||| ||||| Sbjct 312361 GAATATTCACCTCGCCGAGCCGAATTACGCCAAGCTTACCAGCATGCACTTCTACGCGTG 312302 Query 263334 GCGTCGCGGCCTCAAGACTGGCATGTACTATCTGCGCACCCGGCCCGCTGCCAACGCCAT 263393 | ||| | ||||| ||||||||||| |||||||| | |||| || | ||| || Sbjct 312301 GAAGAAGGGCGTGAAGACCGGCATGTACTACCTGCGCACAAAGGCCGCCGCGAGCGCGAT 312242 Query 263394 TCAATTCACCGTCGA 263408 | ||||| || || Sbjct 312241 CAAGTTCACGGTGGA 312227 Score = 98.7 bits (108), Expect = 1e-14 Identities = 108/144 (75%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 262416 CGCGCAACCTCAATCGTGTGATTGACATTAATCACTACCCGGTGCCCGAGGCCCGCCACT 262475 ||||||||||||| | || ||||| || ||||||||| ||||| |||| | Sbjct 313064 CGCGCAACCTCAACAAGATCATCGACATCAACTTCTACCCGGTTGAGGAGGCGCGCCGAT 313005 Query 262476 CGAATCTGCGCCATCGACCGATGGGCGTCGGCGTGCAGGGCCTCGCCGACGTGTTTGCCC 262535 |||| ||||||| || ||||| ||| ||||||| ||||| |||||||||| ||| || Sbjct 313004 CGAACATGCGCCACCGTCCGATCGGCATCGGCGTTCAGGGTCTCGCCGACGCGTTCATCC 312945 Query 262536 TGATGGACCTGCCGTGGGAGAGCG 262559 | ||| | |||||| ||||||| Sbjct 312944 TCATGCGCTTGCCGTTCGAGAGCG 312921 >seq246 Length=352277 Score = 127 bits (140), Expect = 3e-23 Identities = 168/232 (72%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 |||||||||||| | |||||||| ||||| |||| |||| || | |||| | Sbjct 48096 ATCTACAAGGTGTTGAAGCAGGTTCACCCAGACACCGG-----CATC-TCTAGCAAGGCG 48043 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||| ||||||||| || ||||||||||| |||| || |||| | |||| | | Sbjct 48042 ATGGGCATCATGAACAGCTTCGTCAACGACATCTTCGAGCGTATCGCCGGCGAGTCTTCT 47983 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090 || ||||||| || |||||||||| || ||| | | ||||||||||| || || Sbjct 47982 CGTCTGGCGCACTACAACAAGCGCTCAACCATCTCGAGCAGGGAGATCCAGACTGCTGTC 47923 Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || || ||| | | ||| || ||||||| |||||| || || |||||||||| Sbjct 47922 CGTCTCATCCTTCCCGGAGAGCTGGCCAAGCACGCAGTATCTGAGGGCACCA 47871 Score = 114 bits (126), Expect = 2e-19 Identities = 166/232 (72%), Gaps = 8/232 (3%) Strand=Plus/Plus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 |||||||||||| | |||||||| ||||| |||| ||| || | |||| | Sbjct 49517 ATCTACAAGGTGTTGAAGCAGGTTCACCCAGACACCGG------ATC-TCTAGCAAGGCG 49569 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||| ||||||||| || ||||||||||| |||| || |||| | |||| | | Sbjct 49570 ATGGGCATCATGAACAGCTTCGTCAACGACATCTTCGAGCGTATCGCCGGCGAGTCTTCT 49629 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGC-GCGAGATCCAGACCGCCGT 725089 || ||||||| || |||||||||| || ||| | || | ||||||||||| || || Sbjct 49630 CGTCTGGCGCACTACAACAAGCGCTCAACCATCTCCGAGCAGGGAGATCCAGACTGCTGT 49689 Query 725090 GCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACC 725141 || || ||| | | | || ||||||| |||||| || || ||||||||| Sbjct 49690 CCGTCTCATCCTTCCGCGAGAGCTGGCCAAGCACGCAGTATCTGAGGGCACC 49741 >seq124 Length=562620 Score = 127 bits (140), Expect = 3e-23 Identities = 168/232 (72%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 |||||||||||||| |||||||| ||||| |||| |||| || | |||| | Sbjct 3482 ATCTACAAGGTGCTGAAGCAGGTTCACCCAGACACCGG-----CATC-TCTAGCAAGGCG 3535 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||| ||||||||| || ||||||||||| |||| || |||| | |||| | | Sbjct 3536 ATGGGCATCATGAACAGCTTCGTCAACGACATCTTCGAGCGTATCGCCGGCGAGTCTTCT 3595 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090 || ||||||| || |||||||||| || ||| | | ||||||||||| || || Sbjct 3596 CGTCTGGCGCACTACAACAAGCGCTCAACTATCTCGAGCAGGGAGATCCAGACTGCTGTC 3655 Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || || ||| | | || || ||||||| |||||| || || |||||||||| Sbjct 3656 CGTCTCATCCTTCCGGGAGAGCTGGCCAAGCACGCAGTATCTGAGGGCACCA 3707 >seq1860 Length=50733 Score = 114 bits (126), Expect = 2e-19 Identities = 169/235 (72%), Gaps = 12/235 (5%) Strand=Plus/Minus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 ||||||||||| || |||||||| |||||| || || || |||| |||| | Sbjct 47870 ATCTACAAGGTTCTGAAGCAGGTTCACCCCGACAC-----GGGAATT-TCCAGCAAGGCG 47817 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||| |||||||||| ||||| |||||||| |||| ||||||| | |||| | | Sbjct 47816 ATGGGGATCATGAACAGCTTTGTTAACGACATCTTCGAACGCATCGCAAGCGAGTCTTCT 47757 Query 725031 CGCCTGGCGCGCTCCAACAAGCG--CAACACGATCG-GCACGCGCGAGATCCAGACCGCC 725087 || | | || || |||||| || |||| ||| ||| | |||||||||||||| Sbjct 47756 CGTTTAGTGCACTACAACAAACGATCAACCATTTCGAGCAGG---GAGATCCAGACCGCT 47700 Query 725088 GTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || || || ||| | | || || |||||| |||||||||||| ||||| |||| Sbjct 47699 GTCCGTCTCATCCTTCCGGGAGAGTTGGCCAAGCACGCCGTCTCTGAGGGAACCA 47645 >seq950 Length=148279 Score = 109 bits (120), Expect = 8e-18 Identities = 172/235 (73%), Gaps = 15/235 (6%) Strand=Plus/Plus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGA-ACCGTTGGGCCATCCTCCAACAAGTC 724969 |||||||||||| | |||||||| || || || ||| || ||| || | |||| | Sbjct 81240 ATCTACAAGGTGTTGAAGCAGGTT-ACACCAGACACCC---GG--ATC-TCTAGCAAGGC 81292 Query 724970 CATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGG 725029 ||| ||||||||| || ||||||||||| |||| || ||| || |||| | Sbjct 81293 GATGGGCATCATGAACAGCTTCGTCAACGACATCTTCGAGCGTATC-GCCGCGAGTCTTC 81351 Query 725030 TCGCCTGGCGCGCTCCAACAAGCG-CAACACGATCG-GCACGCGCGAGATCCAGACCGCC 725087 ||| ||||||| || ||||||||| |||| ||| ||| | ||||||||||| || Sbjct 81352 TCGTCTGGCGCACTACAACAAGCGTCAACTATCTCGAGCA---GGGAGATCCAGACTGCT 81408 Query 725088 GTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || || || ||| | | ||| || ||||||| |||||| || || |||||||||| Sbjct 81409 GTCCGTCTCATCCTTC-CGGAGAGCTGGCCAAGCACGCAGTATCTGAGGGCACCA 81462 >seq7 Length=1178442 Score = 107 bits (118), Expect = 3e-17 Identities = 166/233 (71%), Gaps = 8/233 (3%) Strand=Plus/Plus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 |||||||||||||| ||||||||||| || || | ||| ||| | |||| | Sbjct 128601 ATCTACAAGGTGCTGAAGCAGGTGCATCCAGACAC-----AGGCAT-CTCTAGCAAGGCG 128654 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||| ||||||||| || || |||||||| || | ||||| | | |||| | | Sbjct 128655 ATGGGAATCATGAACAGCTTCGTTAACGACATCTTCCAACGCATTGCCGGCGAGTCTTCT 128714 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGC-GCGAGATCCAGACCGCCGT 725089 || ||||||| || ||||||||| |||||| || || | ||||| ||||| || || Sbjct 128715 CGTCTGGCGCACTACAACAAGCGTTCAACGATC-TCAAGCAGGGAGATTCAGACGGCTGT 128773 Query 725090 GCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || || ||| | | ||| || || || | ||||||||| || ||||| |||| Sbjct 128774 CCGTCTCATCCTTCCCGGAGAGCTTGCGAAGCACGCCGTTTCTGAGGGAACCA 128826 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7172063924329094