Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq7865 127 2e-24 seq1300 89.7 5e-13 >seq7865 Length=4356 Score = 127 bits (140), Expect = 2e-24 Identities = 170/235 (72%), Gaps = 1/235 (0%) Strand=Plus/Plus Query 35503 TTTA-TTTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGT 35561 |||| ||||||||||| | | || |||| || | ||| |||||| || ||||||| Sbjct 3358 TTTAGTTTCCACCACGCAGACGCAGGACCAGGTGAAGGGTAGACTCCTTCTGGATGTTGT 3417 Query 35562 AATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGT 35621 | || || || || | || ||||||||||| || ||||| ||||||| |||||| | Sbjct 3418 AGTCACTCAGAGTGCGACCATCTTCCAGCTGCTTGCCAGCAAAGATCAACCTCTGCTGAT 3477 Query 35622 CCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCG 35681 ||| || | || ||| ||||| |||||| ||||| | || | | || || || | Sbjct 3478 CCGGGGGGATGCCCTCTTTGTCTTGGATCTTGGCCTTCACATTTTCAATCGAATCACTTG 3537 Query 35682 ATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || ||||| | ||||| |||||||| || | ||||||||||| |||||||| Sbjct 3538 CCTCGACCTCAAGGGTGATGGTTTTACCGGTGAGGGTTTTCACAAAGATCTGCAT 3592 Score = 113 bits (124), Expect = 4e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || || || || | || ||||||||||| || ||||| Sbjct 3629 CTCCTTCTGGATGTTGTAGTCACTCAGAGTGCGACCATCTTCCAGCTGCTTGCCAGCAAA 3688 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||||| |||||| || | || | || ||| ||||| |||||| ||||| | | Sbjct 3689 GATCAACCTCTGCTGATCTGGGGGGATGCCCTCTTTGTCTTGGATCTTGGCCTTCACATT 3748 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | | | ||||| | || ||||| | ||||| |||||||| || | |||||||| Sbjct 3749 TTCGATTGAATCGCTTGCCTCTACCTCAAGGGTGATGGTTTTACCGGTGAGGGTTTTCAC 3808 Query 35725 AAATATCTGCAT 35736 ||| |||||||| Sbjct 3809 AAAGATCTGCAT 3820 >seq1300 Length=83366 Score = 89.7 bits (98), Expect = 5e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| |||| || || || | || ||||||||||| || || || Sbjct 7855 CTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCATCTTCCAGCTGCTTTCCGGCGAA 7796 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| ||||| || |||| || | | |||||||||| ||| || ||||| | Sbjct 7795 GATCAGGCGCTGTTGATCCGGGGGGATTCCCTCCTTGTCCTGGATTTTGGCCTTCACGTT 7736 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | | |||| | || || |||| ||||| || ||||| |||| || || || Sbjct 7735 TTCAATGCTGTCAGATGCCTCTACTTCCAAGGTGATGGTCTTACCAGTCAGGGTCTTTAC 7676 Query 35725 AAATATCTGCAT 35736 ||| |||||||| Sbjct 7675 AAAGATCTGCAT 7664 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450457832021960