Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_026610.2 Length=56637 Score E Sequences producing significant alignments: (Bits) Value seq2646 307 4e-79 seq6053 127 7e-25 >seq2646 Length=27379 Score = 307 bits (340), Expect = 4e-79 Identities = 736/1100 (67%), Gaps = 26/1100 (2%) Strand=Plus/Plus Query 46878 TTGAGTTCGCGCTCGACGATGCCTTGCGACACCTGTTTGGCGAGCATGCGTACTCCAGTA 46937 |||||||| || || || || || | || | || | || ||||| || | || | Sbjct 17226 TTGAGTTCACGTTCAACAATACCCTTGGATATTTGCGTCGCAAGCATTCGGAGGCCTTTG 17285 Query 46938 TTCGGTACACCGTTCCAGCCATACCATTCAGCGATTCGGAACAAGTCACCCTTCACGCTT 46997 || ||| ||| |||||||||||| ||| | |||| ||||| ||||| | || || Sbjct 17286 TTTGGTGAACCCGACCAGCCATACCACTCACCAATTCTAAACAAATCACCTCTGACAGTT 17345 Query 46998 GAGCGCCAACGGCCTTTCGCGTCTTTGTA-ATCAGAACCATCAGATTCCATCCACCAGCC 47056 |||||||| | || |||| ||| ||| |||||||| |||| |||||| || Sbjct 17346 GAGCGCCATTGACCATTCGAAAGAA-GTACATCGGAACCATCGCTTTCCGCCCACCAACC 17404 Query 47057 GACTGAGAATGGTTTACTAGAACCCCAGTCAAAGGATCGGAAGATGCGCCAGCCTTTCGG 47116 |||||||| ||||| || ||||| |||||||| || || || ||| | || | Sbjct 17405 AACTGAGAAGGGTTTTGAGGAGCCCCAATCAAAGGAACGAAACATTTTCCAAC--TTGGA 17462 Query 47117 CGGGTTG--AACCCATCGATGACGTTGTATTG-GCTAGACCAGATGTCATCGAACATACC 47173 || ||| || || | ||| |||||||| ||| ||||| | ||||||| ||| || Sbjct 17463 GGGATTGTGAAATTTTCTACGACATTGTATTGAGCT-GACCACACATCATCGAGCATTCC 17521 Query 47174 ACCCGAGGTGATATCCCAATCGCCTTCAAGCCACGCCTTGCGTTTGTTTGGATCGGTGAT 47233 || || |||||||||| || | ||||| || ||| || ||| | || Sbjct 17522 TCCGCTCGTAATATCCCAATTTCCATGGAGCCAAGCAAGGCGACGATTCTTATCTTTAAT 17581 Query 47234 TCCTTCCAGTTCAGCGATGTACTCTGGACTTAGGTAGATGTTCTCTTTATATGAACCGAA 47293 ||||| ||||||||||| || || ||||| ||||| || || ||||| || ||||| Sbjct 17582 CCCTTCAAGTTCAGCGATATATTCAGGACTGAGGTAAATATTTTCTTTGTAACTTCCGAA 17641 Query 47294 GATACGAACCTGAGTGATTGTAACGTCTTCGCGCTGCTGAGTACGCGGGTTGAATACGTT 47353 | ||||||||| || |||| | ||| || | ||||| | || || || || | Sbjct 17642 CAAACGAACCTGTGTTTTTGTTATTGGTTCACGTTTTTGAGTTCTAGGATTAAAGACATC 17701 Query 47354 GCGCACGATACGTACTGGCACTCCTGGTGGAGCAACGTCAATGAAGCGCTGTTTAACCCA 47413 | ||| || | ||| || || ||||| || ||||| || ||||| ||||| Sbjct 17702 CCTAGTTATAGTAACAACCTTTCCCGGGGGTGCAACATCGATGAAACGTTGTTTCACCCA 17761 Query 47414 GTTGTGACCTACGCCATAAGGGTTGGTGGTTGATAGTACGGTACGTGGGAGCTCTGGCAA 47473 ||||| || || ||||| || || || || || || | | |||| || || Sbjct 17762 ATTGTGCCCAACACCATATGGATTAGTAGTGCTTAACACCACAAGAGGGATTTCCCTCAT 17821 Query 47474 AATGCGTTCAATGACACCGGTCTTCGGATTCACCGGAGAGTGCTTCTCAGGTAGGAATGA 47533 | | |||| |||| || || | ||| | || ||| | |||| ||||| Sbjct 17822 TAAG---TCAACTTCACCTGTTTTTGAATTAATAGGGCTGTGTAATGCCGGTATAAATGA 17878 Query 47534 TGAACGGTTCAAGGACATAGCCATGTCGTAGAGCACGGAGTTCGGTTGCTTAGTTAGCTC 47593 | ||| || | ||||| ||||||||||| || | | || ||||| |||||||| || Sbjct 17879 CGTACGATTTAGCGACATCGCCATGTCGTATAGTTCAGGATTGGGTTGTTTAGTTAGTTC 17938 Query 47594 GTTCCATCCGATGAATGGGAACTCTTGGCCATGGTAGTTCCAGTAGTCATCCTCAGTCTT 47653 ||||||||| || | ||||| ||||| || ||||||||||| || | ||||| | || Sbjct 17939 GTTCCATCCAATATAGGGGAATTCTTGTCCGTGGTAGTTCCAATAATTTTCCTCGTTTTT 17998 Query 47654 CATCTGACGGAATAGGAGCTCCTCGCCGGTATCCCAGACCCACTTGAAGTCTTTACCGGA 47713 ||| ||| || ||||| || || ||| ||| ||||| || || | ||| Sbjct 17999 CATTACACGAAACCAAAGCTCTTCACCCGTAGGCCAAACCCATTTTAA------ATGGGA 18052 Query 47714 TGCAAGGAA--GCGGCACTTCGGTCCTGC---GATCTGAGGGAACCAGCGCTTAGACTTG 47768 ||| |||| | | |||| || | | |||| ||||||| || || || || Sbjct 18053 TGC--GGAACTTATGAATTTCGCGCCGTCATTAAACTGACGGAACCATCGTTTTGATTTA 18110 Query 47769 TTTACCAAGTCATCCAAGTTCTTGTATTCGCGGTCGAAGATTACGCCGCGCCAGAAGTGG 47828 || |||||||| | || || || || | || || ||||| |||||||||||||| Sbjct 18111 GATATTAAGTCATCAAGATTTTTATACTCAAGATCAAAAATTACCCCGCGCCAGAAGTGT 18170 Query 47829 CCGTAGCCGACGCCGACGTAGCGGCGAAAGAATAGGAGCTGAGCATCAGTCTTTCCTGGT 47888 ||||| || | || || |||| |||||| | | | ||||| || ||||| || || Sbjct 18171 CCGTAACCAAGACCAACAAAGCGACGAAAGTACATTACTTGAGCGTCGGTCTTCCCCGGC 18230 Query 47889 CCGCGCGTCCCCTCGTATAGGATGTGATTGCAAGGGCACTTCATT-ACGAGGTCTTGCGA 47947 || | ||||| || || || || ||||| |||||||| |||| | | ||| || || Sbjct 18231 CCCCTAGTCCCTTCATAAAGAATATGATTACAAGGGCATCCCATTAATAAAGTC-TGAGA 18289 Query 47948 CCCCGATAATGGTTCCCAGA 47967 ||| ||| |||||||||| Sbjct 18290 CCCTTCTAACGGTTCCCAGA 18309 Score = 150 bits (166), Expect = 6e-32 Identities = 306/452 (68%), Gaps = 13/452 (3%) Strand=Plus/Plus Query 45162 AGTGAACTCTAGGTTAGGAGTGACCACAACCTCTTCTGGGTTCGCGCCGTACCAAACAGC 45221 || ||| |||| |||||||||||||||||| || || ||||| || |||| |||||| || Sbjct 15543 AGAGAATTCTAAGTTAGGAGTGACCACAACTTCGTCCGGGTTTGCACCGTGCCAAACTGC 15602 Query 45222 CA--TCGCGCGAAGCACTTTCTGAAGCGCCGCCGCACCAGCCTTAGCGATTGCAGGCAGG 45279 | || || || || ||||| || |||| || || | | | || ||| || || Sbjct 15603 TAAGTCCTGCAAA--ACCTTCTGTAGGCCCGCTGCCCCTGTCATTGCAATTTGCGGAAGT 15660 Query 45280 GTTGCTGCTTGAGCCGCCATACGGATACGCAGTGCGTCGCCGGATTCGTTGGCGCGACTA 45339 ||||||| || || || | |||||| |||| || || ||| ||| || ||||| || Sbjct 15661 GTTGCTGTCTGTGCGGCTACACGGATTCGCAAAGCATCACCGCTTTCTTTTGCGCGGCTT 15720 Query 45340 GTTGCATCTGTGATCTGGCCAGACTTGTTCATTGCGCGAGCATAGTCGTTCTCCAGACCT 45399 |||||||| | || || ||| | ||||||||||||| || | || || || Sbjct 15721 GTTGCATCCACCAGTTGCCCGCTCTTCTGGCTTGCGCGAGCATAATCAGTTTCAAGTGCT 15780 Query 45400 TGGCGCTGCTCCCCAAGACCAGCACCGCTCACACCAACGTACTTAGCGTCGCCACCGATC 45459 || ||||| ||| || || | | ||||||| |||||||| ||||| || || Sbjct 15781 TGCCGCTGTTCCGAGAGTCCCTGTGAGTTAACACCAATATACTTAGCATCGCCCCCCATG 15840 Query 45460 GGCACATCAACACGAGAACCGGTACCGGTGCGCACTTCTTCA---TCG------TCATCA 45510 || || | | || ||| || || || || || | ||| ||| || | Sbjct 15841 CCAACGTCGATTCTAGCACCTGTCCCTGTACGAACAGCCTCACTCTCGGGAGTATCGGAA 15900 Query 45511 CTAGTGGTGTGACCGATTCGCACGAAGGTCTCCTGACCCTGCATGAACAACGCTTGACGG 45570 || | | ||| |||| || | || ||||||||||||||||| || | |||||| Sbjct 15901 CTTACGTTCGCACCAATTCTGACAAGAGTATCCTGACCCTGCATGAATAAGGATTGACGA 15960 Query 45571 TAATCCGCCTCGGCACGGTAGATAGCCAGACA 45602 ||||| || ||| | | ||||||||| || || Sbjct 15961 TAATCAGCTTCGCCCCTGTAGATAGCAAGGCA 15992 >seq6053 Length=6552 Score = 127 bits (140), Expect = 7e-25 Identities = 256/380 (67%), Gaps = 0/380 (0%) Strand=Plus/Minus Query 8924 GTGGGTTACCTAGAGATCAACGCGGCGCAGTTAACTAAGGAAGGTACTTCCGGTAATAGC 8983 |||||||| | ||||| || || || || | || || || || || || || |||||| Sbjct 617 GTGGGTTATATGGAGATTAATGCTGCCCAACTCACCAAAGAGGGAACGTCAGGAAATAGC 558 Query 8984 CTGTCCAAGGCCTTAGCCCCGCTAGCCCAGAGCCAAGCAACCCTGACACTTTGCTTTGTC 9043 || |||||| || | || ||| | | | || | | | || || || Sbjct 557 TTGAGCAAGGCTCTAACGCCACTAATGAATAAAAGTGGTTCCTTAGTAGTATGTTTCGTG 498 Query 9044 GACGAGTTCGATAAGCTGTTTATCTCAGGCAACACAAATAGCGAGTTAGCCCATGAAACC 9103 || ||||| |||||| |||| || || || || | |||| || | || || ||||| Sbjct 497 GATGAGTTTGATAAGTTGTTCATATCTGGAAATAATAATATGGATATGGCACACGAAACA 438 Query 9104 ACCAATGGTGTCCAGAATGAATTCCTTCGCGTCCTTGAATCTAAGACGACGTCGGTTTTC 9163 |||||||| |||||||| ||||| | || | ||| | |||| || || Sbjct 437 ACCAATGGCGTCCAGAACGAATTTTTAAAGGTGTTGGAAAGCACTCATGCGTCAGTATTT 378 Query 9164 GGGGACTACGGCAAGTACATCCAAGCGCCAGTCGATAATGTGCTGTTCGTCTTCGCAGGA 9223 |||||||| || ||||||| ||| || |||||||||||||| || | ||||| || Sbjct 377 GGGGACTATGGGAAGTACACGGAAGTTCCGGTCGATAATGTGCTATTTATTTTCGCGGGC 318 Query 9224 GCTTTCAACGGTGAAGAGAATATTACAATCGACCGCCTACGTGAGTTCGGCCTCAAAACA 9283 || || || |||||| |||||||||||| ||| | || | || || || | ||||| Sbjct 317 GCATTTAATGGTGAACCGAATATTACAATTGACAGGTTAAGGGAATTTGGAATTAAAACG 258 Query 9284 GAGTTCCTCGGACGAGTAGG 9303 || ||||| || || || || Sbjct 257 GAATTCCTTGGGCGTGTTGG 238 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 180988642544706