Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq117 224 1e-53 seq99 127 3e-24 >seq117 Length=549210 Score = 224 bits (248), Expect = 1e-53 Identities = 1103/1745 (63%), Gaps = 18/1745 (1%) Strand=Plus/Plus Query 68395 GCGGGTTTTGTACGTAGATAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAA 68454 |||| ||||| || || |||||||| ||||| |||| || |||| ||||||| Sbjct 312254 GCGGCCTTTGTGCGCAGGTAGTACATGCCGGTCTTCACGCCCTTCTTCCACGCGTAGAAG 312313 Query 68455 TGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATATGAATATTCATCGATTGACTT 68514 ||||| || || || |||| ||| | || ||||| | |||||||||| || ||||| Sbjct 312314 TGCATGCTGGTAAGCTTGGCGTAATTCGGCTCGGCGAGGTGAATATTCAGTGACTGACTC 312373 Query 68515 TGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCTTTTGAGGAATTTCC 68574 || |||||||| || || | ||| || ||||| || || || |||| || | || ||| Sbjct 312374 TGGTCGATGAAGGCGCCGCGATCGGCAGCCATGTTGATTATCGTCTTCTGCGAGATCTCC 312433 Query 68575 CAAATAGTCTTAAAAATCTGTTTGATATCATCTGGAAGG--CTCGTATTT-TGAATGGAT 68631 || | ||||| | | ||| || | || || || | |||| || |||| ||| Sbjct 312434 CAGACGGTCTTGTAGAGCTGCTTCAGGTCGTCCGGGATCTCCTCGACGTTCTGAACGGAG 312493 Query 68632 CCACCATCGGATATAATTATATTCTTGATCTCATCATTCCACAATTTTCTCTCCGTTAAA 68691 || |||| || || ||||| || | || | ||||| | ||| || | Sbjct 312494 CCGTTCTCGGCGATGATGCGGTTCTTCATGTGGTCGTCCCACAGGCCGCACTCGGTGAGG 312553 Query 68692 ACTCTAAGGAGATGCGGATTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTAA 68751 | | || || || | || || || || || || || || | ||| | || | ||| Sbjct 312554 TCCTTCAGCAGGTGGTGGTTGACGATCTGGAACTCGCCGGAGAGCACGCGCCGCGAGTAG 312613 Query 68752 ATATTACTGGTATATGGTTCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCA 68811 || || || || || | || | || ||||| || || || || || || || || || Sbjct 312614 ATGTTGCTCGTGTACGCCTCGATCGACTCATTGTTGCCGAGGATCTGTGCCGTCGACGCG 312673 Query 68812 GTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCATGTGTTATGATTTTATCTTTT 68871 || ||||| || || | || | || || | | || || | ||| || | || Sbjct 312674 GTCGGCATCGGCGCGAGCAGCAGGCTGTTGCGGACGCCGTGAGCGGCGATCTTCGCCTTG 312733 Query 68872 AGATGTTTCCAATCCCAAAGATCAGATGGTACAACATTCCAAAGATCGTATTGTAGAATT 68931 || |||| ||||| || || | || || ||| | ||||| || || | Sbjct 312734 AGCGCGCTCCAGTCCCAGAGGTCGGTGGGGGTCACGCCCCACATGTCGTACTGCAGGACG 312793 Query 68932 CCGTTACTTGCATATGATCCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCA 68991 || || || | | || || || || || || || || || || || || Sbjct 312794 CCCTTGCTGACGGGGCAGCCGGCGTACGTCTCGTAGGGGCCAAGCTTCTCCGCGAGCTCG 312853 Query 68992 CAACTTGCCTCTAATGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGT 69051 || || ||||| | || ||||| || || | ||||| |||| ||| ||||| || Sbjct 312854 CAGCTCGCCTCCAGCGCGCCGTAGTATATCGACTCGAATATCTGCTTGTTGAGCAGCTGG 312913 Query 69052 GCTT-CTAGACTATCGAATGGATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGAAC 69110 |||| || | || ||||| || | | | || || || || || || | |||||||| Sbjct 312914 GCTTGCTCG-CTCTCGAACGGCAAGCGCATGAGGATGAACGCGTCGGCGAGACCCTGAAC 312972 Query 69111 CCCAATACCGATAGGTCTATGTCTCTTATTTGAACTTTCAGCTTCTGGAATAGGATAATA 69170 || || ||||| || | || | | | || || | || || || || || | Sbjct 312973 GCCGATGCCGATCGGACGGTGGCGCATGTTCGATCGGCGCGCCTCCTCAACCGGGTAGAA 313032 Query 69171 ATTAATATCTATAATTTTATTAAGATTTCGGACTACTACTTTAACCACGTCCTTTAGTTT 69230 || || || || || || || || || || | || || ||||||||| || || Sbjct 313033 GTTGATGTCGATGATCTTGTTGAGGTTGCGCGTGATGACCTTCGTCACGTCCTTCAGCTT 313092 Query 69231 GAGAAAATCAAATCGTC----CATCTATAACAAACATATTCAGTGCTACAGATGCTAGAT 69286 | | || || | |||| | | || |||| || || || || || || || | Sbjct 313093 GCGGAAGTCGTA-CGTCTTGTCCGCGCGCACGTACATGTTGAGCGCGACCGAGGCGAGGT 313151 Query 69287 TACAAACTGCTACCTCATTAGAATTTGCATATTGTATTATCTCTGTACATAGATTACTAC 69346 | || || || ||||| | | || | | || || || || || || || | Sbjct 313152 TGCAGACGGCCGTCTCATCGGGCGACGAGTACTCGACGATTTCCGTGCACAGGTTGCTGC 313211 Query 69347 ATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAA 69406 | || || || || || || ||||| || ||| || || ||||||||||| || | Sbjct 313212 ACTTAATGGTGCCGAGGTTCTGCTGGTTCGACTTGCGATTGCACGCGTCCTTGTAGAGCA 313271 Query 69407 TAAACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCAT 69466 | | ||||| || ||||| |||| ||||| || || | | ||| | | || | Sbjct 313272 TGTAGGGAGTTCCCGTTTCCGTCTGCGATTCCATGATGGCGTACCACAGCTGCTGTGCTT 313331 Query 69467 TTATTACGGTCTTGTAACGCTTCTCT--TTTTCATATT--GTGTATATAGCCGTTCGAAT 69522 | || || ||| | || | | || ||||| || | ||||| | ||| ||||||| Sbjct 313332 TGAT--CGTCCTTCTCACTTTGCCCTGCTTTTCGTACTTGGTGTAGAGAGC--TTCGAAT 313387 Query 69523 TCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACA 69582 || || ||||| || |||| || || ||||| |||||||| | ||||| | Sbjct 313388 TCGTCGCCCCAGCAGTCGGCCAAGCCCGGGCATTCCGCCGGACACATGAGAGACCAGTCC 313447 Query 69583 TCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCT 69642 | || | || | |||| || ||||| || ||||| || | || || ||| Sbjct 313448 TGATTGAGTTCGACCCTCGTCATGAACAGATCCGGGATCCAGAGCCCGTAGAACAGGTCT 313507 Query 69643 CTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCA 69702 || | || | ||| || || || || || || || ||||||||||| | || || Sbjct 313508 CTCGCTCGCTGTTCCTCCTTCCCGGTGTTCTTCTTGCAGTCGAGAAACTCGAAGATGTCC 313567 Query 69703 GAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCT 69762 | ||||| || || || || ||||| | | | ||||| || || || || ||||| || Sbjct 313568 GCGTGCCACGGCTCGAGGTACATCGCAAAGGCGCCCGGACGCTTGTTGCCGCCCTGGTCG 313627 Query 69763 ATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCA 69822 | ||| || || |||||||| |||||| |||||| |||| | || || || || Sbjct 313628 ACGTACCTCGCCGTGTTATTGAAGACTCGCAGCATGGGAAGGAGGCCGTTCGAGCAGCCG 313687 Query 69823 TTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCT 69882 || || || | || || ||||| ||||| || || || | || || ||| Sbjct 313688 TTGGTGCCGGCGATGTAGCTTCCCGAGGCGCGGATGTTGTGTATGTTGACGCCGATGCCT 313747 Query 69883 CCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTA 69942 ||||| || || || || || || |||| ||||| || || ||||| ||||| Sbjct 313748 CCTGCGGACTTCGATATGAGCGCGCATTCCTTCAGCGTGTCGTAGATGCCCTCGATGCTG 313807 Query 69943 TCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTA 70002 || || |||| | || || || ||||| || | || || | || || || || Sbjct 313808 TCGTCCTTCATCGTCAGCAGGAAGCAGCTGGAGAGCTGCGGACGCGGCGTGCCGGCGTTG 313867 Query 70003 AATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATA 70062 || | || || || ||||| |||||||| || || || ||||| ||||| || || || Sbjct 313868 AAGAGCGTCGGCGACGCGTGCGTGAACCACTTCTCCGACAGCAGGTTGTACGTCTCGATG 313927 Query 70063 GCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGT 70122 || || || |||| ||| || || || | | || | ||| | ||| ||||| || Sbjct 313928 GCGCTGTCGATGTCCCTCTGGTGGATCCCGACGGACACCCTCATGAGCATCTGCTGGGGA 313987 Query 70123 CGTTC 70127 || || Sbjct 313988 CGCTC 313992 >seq99 Length=602874 Score = 127 bits (140), Expect = 3e-24 Identities = 150/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 39999 CCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATGCCAATACATGTTTAATAA 40058 ||| |||||||||||| ||||||||||| || || ||||| ||||| || ||| || | Sbjct 458788 CCAGATTTTCATTCACAATTCCATCACTTGCAGCGAAAAACGCCAACACGTGTGATATGA 458847 Query 40059 AATATTTTTCATCGGGTGTCAATTTATTCCAGTCATTGATATCTTTTGATATATCTACTT 40118 | | || || |||| ||| ||| | ||| ||| | | |||||| | ||||| | Sbjct 458848 AGTGTTGCTCCTCGGTCTTCAGTTTGTCCCAATCAGTCAAATCTTTGCTGAGGTCTACCT 458907 Query 40119 CTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTACATGTTCCATATATCACGATATT 40178 |||| |||||||||| || |||||||| || |||||||| | ||| || ||| |||| | Sbjct 458908 CTTCCACTGTCCAAAAGGATGCCTCTGCTTTCTTGTACATTTGCCAGATGTCATGATACT 458967 Query 40179 GTATTGGAAAAATAACAAATCTA 40201 || || |||| ||||| ||| Sbjct 458968 TGATGGGGAAAAGTACAAACCTA 458990 Score = 87.8 bits (96), Expect = 2e-12 Identities = 99/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 39639 CCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTT 39698 ||||||||||||| || | || || || || || |||||||| | ||||| |||| Sbjct 457837 CCTCATCTCTACTGATGAGCTCATTGCTGAAGGTCAGACCAGGCATCAAGCCACGTTTTT 457896 Query 39699 TGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATG 39758 | ||||| ||||| |||||||| || || || |||||||| || || || || | || | Sbjct 457897 TCAGCCAGAATATAGCAGCAAATGACCCTGAGAAGAAGATTCCCTCGACAGCCGAGAAAG 457956 Query 39759 CAACAAGTCTCTC 39771 | || |||| ||| Sbjct 457957 CCACCAGTCGCTC 457969 Score = 86.0 bits (94), Expect = 9e-12 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 39311 GACATAACTCCCATTTTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCT 39370 ||||| || ||||| || ||||| || ||||| | ||||| ||||| || || || ||| Sbjct 457045 GACATCACACCCATCTTCTGGTACTCGCCAACCCTCTTCTCAAAAAAGTTGGTCTTTCCT 457104 Query 39371 TCCAATGATATATTTTCCATGAAATCAAACGGATT 39405 ||||| ||||| | ||||||||||| |||||||| Sbjct 457105 TCCAAGGATATGTGCTCCATGAAATCGAACGGATT 457139 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686397164566680