Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19]
59,587 sequences; 511,738,253 total letters
Query= NC_027402.1
Length=240413
Score E
Sequences producing significant alignments: (Bits) Value
seq35078 107 3e-18
seq47041 100 4e-16
>seq35078
Length=336
Score = 107 bits (118), Expect = 3e-18
Identities = 149/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 197669 GATCGTACTGGAACAGGGACGCTTTCTGTCTTTGGACGCCAGATGCGTTTTGATTTGCGT 197728
|| || || || || || ||| | ||||| ||||| | || ||||||||||| || ||
Sbjct 311 GACCGAACGGGTACGGGTACGGTGTCTGTTTTTGGTCATCAACTGCGTTTTGATCTGAGT 252
Query 197729 AAAGGTTTCCCGTTAGTCACGACTAAGAAACTCCACCTGCGTTCTATTATCCATGAACTG 197788
|||| || || | || || ||||| ||| ||| ||| || || || |||||||||
Sbjct 251 GAAGGCTTTCCTCTTGTTACCACTAAAAAATGCCATCTGAAATCGATAATTCATGAACTG 192
Query 197789 CTGTGGTTCCTTAGTGGGGATACCAACACCAAATATCTGGAAGATAACGGCGTTACCATT 197848
|| |||||| | ||||| || || |||| || || || ||||||| || ||| |||
Sbjct 191 CTCTGGTTCTTGAGTGGTGAAACGAACATAAAGTACTTGCAAGATAATGGTGTTCGCATC 132
Query 197849 TGGCGGGAGTGGCAAGATGAAAATGGGAA 197877
||| |||||| |||||| | || ||
Sbjct 131 TGGAATGAGTGGGCTGATGAAGAAGGCAA 103
>seq47041
Length=258
Score = 100 bits (110), Expect = 4e-16
Identities = 117/158 (74%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 197730 AAGGTTTCCCGTTAGTCACGACTAAGAAACTCCACCTGCGTTCTATTATCCATGAACTGC 197789
|||| || | | | ||||| ||||| |||||||| | ||||| || || || |||||||
Sbjct 163 AAGGCTTTCAGGTTGTCACCACTAAAAAACTCCATTTACGTTCCATCATTCACGAACTGC 104
Query 197790 TGTGGTTCCTTAGTGGGGATACCAACACCAAATATCTGGAAGATAACGGCGTTACCATTT 197849
| ||||| || | || |||||||| | ||||| || ||||||||||||| ||| |
Sbjct 103 TCTGGTTTCTAAAAGGCGATACCAATATTAAATACCTCAAAGATAACGGCGTGCGCATCT 44
Query 197850 GGCGGGAGTGGCAAGATGAAAATGGGAACCTTGGCCCC 197887
|| || ||| ||||||||| || | ||||| |||
Sbjct 43 GGGATGAATGGGCAGATGAAAACGGTGATCTTGGACCC 6
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 768620675761960
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |