Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq1300 113 4e-20 seq7865 95.1 1e-14 >seq1300 Length=83366 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078 ||||||| |||| |||| |||| || | ||||| || || || || ||||||||| Sbjct 7892 TGCCTCCACGCAGACGCAGAACCAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGG 7833 Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138 || |||| | ||||| ||||| || |||||| | || || |||||||||||||| | Sbjct 7832 ACAGAGTGCGGCCATCTTCCAGCTGCTTTCCGGCGAAGATCAGGCGCTGTTGATCCGGGG 7773 Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198 | | ||||| || || ||| ||| |||| | |||| | |||| | || || | Sbjct 7772 GGATTCCCTCCTTGTCCTGGATTTTGGCCTTCACGTTTTCAATGCTGTCAGATGCCTCTA 7713 Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 |||| | || || | || || ||||| || || |||||||| |||||| Sbjct 7712 CTTCCAAGGTGATGGTCTTACCAGTCAGGGTCTTTACAAAGATCTGCATA 7663 Score = 113 bits (124), Expect = 4e-20 Identities = 165/233 (71%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 27019 TGCCTCCGCGCAAC----CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAG 27074 ||||||| ||| || |||| |||| || | ||||| || || || || |||||| Sbjct 8124 TGCCTCCACGCCACAGTACGCAGAACCAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAG 8065 Query 27075 TCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCC 27134 ||| || |||| | ||||| |||||||| |||||| | || || |||||||||||| Sbjct 8064 TCGGACAGAGTGCGGCCATCTTCCAGCTGTTTTCCGGCGAAGATCAGGCGCTGTTGATCC 8005 Query 27135 GGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCT 27194 || || | ||||| || || ||| ||| |||| | |||| | ||| | || Sbjct 8004 GGGGGGATTCCCTCCTTGTCCTGGATTTTGGCCTTCACGTTTTCAATGCAGTCAGATGCC 7945 Query 27195 TCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || ||||||| || || | ||||| ||||| || || || ||||||||||| Sbjct 7944 TCTACTTCTAAGGTGATGGTCTTGCCAGTCAGGGTCTTGACGAAGATTTGCAT 7892 >seq7865 Length=4356 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 27018 TTGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCG 27077 || || || |||| |||| |||| || | ||||| || || || || |||||||| Sbjct 3363 TTTCCACCACGCAGACGCAGGACCAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCA 3422 Query 27078 CTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGC 27137 |||| |||| | ||||| ||||| || || || | || | | ||| |||||||| Sbjct 3423 CTCAGAGTGCGACCATCTTCCAGCTGCTTGCCAGCAAAGATCAACCTCTGCTGATCCGGG 3482 Query 27138 GGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCA 27197 || | |||||||| || ||||||| |||| |||| | | || | || || Sbjct 3483 GGGATGCCCTCTTTGTCTTGGATCTTGGCCTTCACATTTTCAATCGAATCACTTGCCTCG 3542 Query 27198 ACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || || || | ||| || || || |||||||||||||| ||||| Sbjct 3543 ACCTCAAGGGTGATGGTTTTACCGGTGAGGGTTTTCACAAAGATCTGCAT 3592 Score = 89.7 bits (98), Expect = 4e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078 |||| || |||| |||| || | || | ||||| || || || || |||||||| | Sbjct 3592 TGCCACCACGCAGACGCAGGACAAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAC 3651 Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138 ||| |||| | ||||| ||||| || || || | || | | ||| ||||| || | Sbjct 3652 TCAGAGTGCGACCATCTTCCAGCTGCTTGCCAGCAAAGATCAACCTCTGCTGATCTGGGG 3711 Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198 | | |||||||| || ||||||| |||| |||| | | || | || || | Sbjct 3712 GGATGCCCTCTTTGTCTTGGATCTTGGCCTTCACATTTTCGATTGAATCGCTTGCCTCTA 3771 Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | || || || || | ||| || || || |||||||||||||| ||||| Sbjct 3772 CCTCAAGGGTGATGGTTTTACCGGTGAGGGTTTTCACAAAGATCTGCAT 3820 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424625805600744