Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq1300 145 2e-29 seq7865 143 8e-29 seq41789 111 5e-19 seq361 102 2e-16 seq24 95.1 4e-14 seq14825 87.8 5e-12 seq168 84.2 7e-11 >seq1300 Length=83366 Score = 145 bits (160), Expect = 2e-29 Identities = 173/235 (74%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| ||| || ||||| | | ||||| || |||||||||||||| || || || || | Sbjct 7898 TTTGCATGCCTCCACGCAGACGCAGAACCAGGTGAAGAGTAGACTCCTTCTGGATGTTGT 7839 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || || | || || |||||||| || || ||||| || ||||| || || || |||| Sbjct 7838 AGTCGGACAGAGTGCGGCCATCTTCCAGCTGCTTTCCGGCGAAGATCAGGCGCTGTTGAT 7779 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 | || || ||||| || || ||||| ||||| || || || || ||||| ||||||| Sbjct 7778 CCGGGGGGATTCCCTCCTTGTCCTGGATTTTGGCCTTCACGTTTTCAATGCTGTCAGATG 7719 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || ||||| | || | ||||| || || || || |||||||| |||||||| Sbjct 7718 CCTCTACTTCCAAGGTGATGGTCTTACCAGTCAGGGTCTTTACAAAGATCTGCAT 7664 Score = 134 bits (148), Expect = 4e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 ||||| || |||||||||||||| || || || || || || || | || || |||||| Sbjct 8103 AGAACCAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCATCT 8044 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || || |||||||| || ||||| || || || ||||| || || ||||| || || ||| Sbjct 8043 TCCAGCTGTTTTCCGGCGAAGATCAGGCGCTGTTGATCCGGGGGGATTCCCTCCTTGTCC 7984 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 || ||||| || || || || ||||| | ||||||| || ||||| | || | ||| Sbjct 7983 TGGATTTTGGCCTTCACGTTTTCAATGCAGTCAGATGCCTCTACTTCTAAGGTGATGGTC 7924 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || || || || || || ||||| Sbjct 7923 TTGCCAGTCAGGGTCTTGACGAAGATTTGCAT 7892 >seq7865 Length=4356 Score = 143 bits (158), Expect = 8e-29 Identities = 174/237 (73%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 140501 ATTTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATT 140560 |||||| | |||||||| | | || || || ||||| |||||||| || || || || Sbjct 3356 ATTTTAGTTTCCACCACGCAGACGCAGGACCAGGTGAAGGGTAGACTCCTTCTGGATGTT 3415 Query 140561 ATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTG 140620 || ||| | || || |||||||| || || || ||||||||||| | | ||||| Sbjct 3416 GTAGTCACTCAGAGTGCGACCATCTTCCAGCTGCTTGCCAGCAAAGATCAACCTCTGCTG 3475 Query 140621 ATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGA 140680 ||| || || || || ||||| || || || || || || ||||| |||||||||||| Sbjct 3476 ATCCGGGGGGATGCCCTCTTTGTCTTGGATCTTGGCCTTCACATTTTCAATCGAATCACT 3535 Query 140681 TGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || ||||| || | || || ||||| || ||||| ||||| |||||||| Sbjct 3536 TGCCTCGACCTCAAGGGTGATGGTTTTACCGGTGAGGGTTTTCACAAAGATCTGCAT 3592 Score = 132 bits (146), Expect = 1e-25 Identities = 168/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||| |||||||| | | || ||||| ||||| |||||||| || || || || || || Sbjct 3590 CATGCCACCACGCAGACGCAGGACAAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTC 3649 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 | | || || |||||||| || || || ||||||||||| | | |||||||| || Sbjct 3650 ACTCAGAGTGCGACCATCTTCCAGCTGCTTGCCAGCAAAGATCAACCTCTGCTGATCTGG 3709 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 || || || ||||| || || || || || || ||||| || || ||||| || || Sbjct 3710 GGGGATGCCCTCTTTGTCTTGGATCTTGGCCTTCACATTTTCGATTGAATCGCTTGCCTC 3769 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || ||||| || | || || ||||| || ||||| ||||| |||||||| Sbjct 3770 TACCTCAAGGGTGATGGTTTTACCGGTGAGGGTTTTCACAAAGATCTGCAT 3820 Score = 84.2 bits (92), Expect = 7e-11 Identities = 103/141 (73%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||| |||||||| | | || || || ||||| |||||||| || || || || || || Sbjct 3818 CATGCCACCACGCAGACGCAGGACCAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTC 3877 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 | | || || |||||||| || || || ||||||||||| | | |||||||| || Sbjct 3878 ACTCAGAGTGCGACCATCTTCCAGCTGCTTGCCAGCAAAGATCAACCTCTGCTGATCCGG 3937 Query 140627 AGGAATTCCTTCTTTATCCTG 140647 || || || ||||| ||||| Sbjct 3938 GGGGATGCCCTCTTTGTCCTG 3958 >seq41789 Length=288 Score = 111 bits (122), Expect = 5e-19 Identities = 166/235 (71%), Gaps = 3/235 (1%) Strand=Plus/Plus Query 349654 TGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACC 349713 |||||||||| |||| || | || || || ||| | ||| |||||| ||||||||||| Sbjct 14 TGCAACAAAAAATGCAGGTAAAATAGCAGGTTTAGAAGTTGAAAGAATTATTAATGAACC 73 Query 349714 CACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCT 349773 || |||||||| | |||| ||| |||||||| | || ||||| |||| | | Sbjct 74 AACAGCTGCAGCTTTAGCATTTGGTATTGATAAA---AAAGATAAAGAACAAAAAGTATT 130 Query 349774 TATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAAT 349833 ||| ||||||||||| || || |||||||| ||| | ||| | | | | |||| Sbjct 131 GGTTTACGATTTAGGTGGAGGAACATTTGATGTTTCAATCCTAGATTTAGCAAATGGAAC 190 Query 349834 TTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGAT 349888 ||||||||| | |||| | || || | | |||||||| ||||||||| Sbjct 191 ATTTGAAGTTTTATCAACATCAGGAATTAATGAATTAGGTGGAGATGATTTTGAT 245 >seq361 Length=278150 Score = 102 bits (112), Expect = 2e-16 Identities = 82/99 (83%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 183692 ACCACCTAAATGTGTATCGCCAGCAGTAGCTTTAACTTCAAATATTCCGTCTTCAATATT 183751 ||| |||||||| ||||| |||||||||| ||| || ||||| || ||||||||||| | Sbjct 189799 ACCTCCTAAATGCGTATCACCAGCAGTAGATTTCACCTCAAAGATGCCGTCTTCAATGGT 189858 Query 183752 TAAAATTGATACATCAAATGTACCACCACCCAAATCAAA 183790 || ||||| |||||||| |||||||| |||| ||| || Sbjct 189859 CAAGATTGAGACATCAAAAGTACCACCCCCCAGATCGAA 189897 Score = 102 bits (112), Expect = 2e-16 Identities = 106/139 (76%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 349610 GCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCT 349669 ||||| | || |||||||||||||| ||||| ||||| ||||| ||||| || Sbjct 190372 GCTGTAGTAACAGTACCAGCCTATTTCAATGACAGTCAGCGGCAGGCAACGAAAGACGCC 190313 Query 349670 GGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATT 349729 |||| |||| | || | ||||| ||| | || || || ||||| || |||||||| ||| Sbjct 190312 GGCACCATTTCTGGTCTCAATGTCCTACGTATTATCAACGAACCAACAGCTGCAGCTATT 190253 Query 349730 GCATATGGGCTTGATAAAA 349748 |||||||| ||||| |||| Sbjct 190252 GCATATGGACTTGACAAAA 190234 >seq24 Length=941673 Score = 95.1 bits (104), Expect = 4e-14 Identities = 86/107 (80%), Gaps = 1/107 (1%) Strand=Plus/Plus Query 140530 CAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAA 140589 |||| |||||||| ||||| ||||| ||||| ||||| || | || || ||||| || | Sbjct 528643 CAAG-TGAAGAGTGGACTCCTTTTGGATATTGTAATCCGAAAGAGTGCGTCCATCCTCCA 528701 Query 140590 GTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCT 140636 | ||||| || ||||| || || || |||||||| |||||||||||| Sbjct 528702 GCTGTTTCCCGGCAAATATCAGCCGCTGCTGATCCGGAGGAATTCCT 528748 >seq14825 Length=871 Score = 87.8 bits (96), Expect = 5e-12 Identities = 192/280 (69%), Gaps = 7/280 (3%) Strand=Plus/Minus Query 349613 GTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGC 349672 || ||||| ||||| || |||||| ||||||| || ||| || || |||||||| | Sbjct 343 GTCATTACGGTACCTGCTTATTTTGATGATGCGCAACGTCAAGCCACCAAAGATGCGGCT 284 Query 349673 AGCATTGCGGGGTTAAATGTTCTAAGAATGATT-AATGAACCCACTGCTGCAGCAATTGC 349731 | | || || || ||||| ||| | ||| |||||||| || || ||||| |||| Sbjct 283 CGTTTGGCTGGTTTGAATGT-CTATCGCTTATTGAATGAACCGACAGCAGCAGCCGTTGC 225 Query 349732 ATATGGGCTTGATAAAA-TGA--GTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGG 349788 || || | ||| | ||| | | | | ||||||| ||| | | ||| || || Sbjct 224 CTACGGTTTGGATCAGGGTGAAAGCGTCGATGAAAAAATTATCGCGGTGTATGACTTGGG 165 Query 349789 TGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAG-GGAATTTTTGAAGTTAAAG 349847 |||||||||||| || | || || | || ||||| | || |||||||||| || Sbjct 164 TGGTGGTACTTTCGACATTTCTATA-TTACGTTTGAATCGTGGCGTTTTTGAAGTGTTAG 106 Query 349848 CAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGA 349887 |||| | |||||| | ||| ||||| || || ||||| Sbjct 105 CAACAGGGGGTGATTCTGCTCTAGGTGGTGATGACTTTGA 66 >seq168 Length=435543 Score = 84.2 bits (92), Expect = 7e-11 Identities = 68/80 (85%), Gaps = 2/80 (3%) Strand=Plus/Plus Query 235883 AATATAGGGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGG 235942 |||||||||| |||||| ||| | |||||| ||||||||||||||| |||||| ||||| Sbjct 427873 AATATAGGGG-ATGTAGCTCAGT-GGTAGAGCGCTCGCTTTGCATGTGAGAGGCCCCGGG 427930 Query 235943 ATCAAAACCCAGCATCTCCA 235962 |||| ||| ||||||||| Sbjct 427931 TTCAATCCCCGGCATCTCCA 427950 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1514097566243361