Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq117 192 6e-44 seq698 138 1e-27 seq14 100 3e-16 >seq117 Length=549210 Score = 192 bits (212), Expect = 6e-44 Identities = 277/384 (72%), Gaps = 5/384 (1%) Strand=Plus/Minus Query 53243 GAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAAC 53302 ||||||||| || | || | |||| || |||||||| |||| || || |||||| Sbjct 313923 GAGACGTACAACCTGCTGTCGGAGAAGTGGTTCACGCACGCGTCGCCGACGCTCTTCAAC 313864 Query 53303 GCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCG 53362 || || ||| | || ||| | || |||||||||||| || |||||||||| ||| Sbjct 313863 GCCGGCACGCCGCGTCCGCAGCTCTCCAGCTGCTTCCTGCTGACGATGAAGGACGACAGC 313804 Query 53363 ATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGT 53422 ||||| ||||||||||| ||||| ||||| || || | ||| || |||| | || || Sbjct 313803 ATCGAGGGCATCTACGACACGCTGAAGGAATGCGCGCTCATATCGAAGTCCGCAGGAGGC 313744 Query 53423 ATCGGTATCCAC-TGCTCGAACGTCCGTGCGAACGGCACACCA-ATCAAGGGGACGAACG 53480 ||||| || || | | | ||| |||| || ||| | | | ||| || || |||| Sbjct 313743 ATCGGCGTCAACATACAC-AACATCCGCGC-CTCGGGAAGCTACATCGCCGGCACCAACG 313686 Query 53481 GCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCA 53540 || | | | || || | || ||||| || |||||||| |||||||| |||||||| Sbjct 313685 GCTGCTCGAACGGCCTCCTTCCCATGCTGCGAGTCTTCAATAACACGGCGAGGTACGTCG 313626 Query 53541 ACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCG 53600 ||||||| || ||||| ||| | || || || |||||||||||||||||||| | Sbjct 313625 ACCAGGGCGGCAACAAGCGTCCGGGCGCCTTTGCGATGTACCTCGAGCCGTGGCACGCGG 313566 Query 53601 ACATTATGGAGTTTCTCGAGCTGC 53624 |||| | ||||||||||| |||| Sbjct 313565 ACATCTTCGAGTTTCTCGA-CTGC 313543 Score = 168 bits (186), Expect = 7e-37 Identities = 556/852 (65%), Gaps = 38/852 (4%) Strand=Plus/Minus Query 55097 GACTTTGACAAGCTTCACGAAGTGACGCGTGTTGTGACTCGGAACCTGAACCGGGTCATC 55156 ||||| |||||| | || |||||| || | || || ||||| ||| | ||||| Sbjct 313101 GACTTCCGCAAGCTGAAGGACGTGACGAAGGTCATCACGCGCAACCTCAACAAGATCATC 313042 Query 55157 GACAAGAATTACTACCCGACTGAAGCGGCGCGCAAGTCCAACCTCCGGCACCGGCCCATC 55216 |||| || | ||||||| ||| | ||||||| || ||| | || ||||| || ||| Sbjct 313041 GACATCAACTTCTACCCGGTTGAGGAGGCGCGCCGATCGAACATGCGCCACCGTCCGATC 312982 Query 55217 GCCATCGGTGTACAGGGCTTGGCCGACATCTTCATGATGCTCGGATTGCCCTTCGACTCG 55276 | |||||| || ||||| | |||||| ||||| | | | ||||| ||||| Sbjct 312981 GGCATCGGCGTTCAGGGTCTCGCCGACGCGTTCATCCTCATGCGCTTGCCGTTCGAGAGC 312922 Query 55277 GAACCTGCTCGAGAAATTAACCAGGACATCTTC-AGTCGCATCTACTTTGCAGCGCTCGA 55335 || | || | | ||| || | || ||| ||||| || |||| | ||||| || Sbjct 312921 GAGCAAGCCCAGCTGCTCAACAAGCAGATATTCGAGTCG-ATATACTACGGCGCGCTGGA 312863 Query 55336 GGAGTCGTGTCATCTGGCTATGAGCGAGGGGACCTACGAGACGTTC-CGTGATTCGCCAG 55394 || | || | || || || || |||||||||||| | | | | | || Sbjct 312862 GGCGAGCTGCGAGCTCGCGGAGAAGCTTGGCCCCTACGAGACGTACGCCGGCTGCCCCGT 312803 Query 55395 CTGACAAGGGACTTCTCCAGTTCGATCTATGGGGCAAGTCT------GACCCCATGT--T 55446 | | |||||| | || |||| ||| | |||||| | | |||| | | | Sbjct 312802 CAG-CAAGGGCGTCCTGCAGTACGACATGTGGGGCGTGACCCCCACCGACCTCTGGGACT 312744 Query 55447 TGA-------CAAGTTGAAGCATGACATTCACTTGTGGGGCCTACGCAACTCCCTGCTCG 55499 || |||| |||| | | |||| ||| | |||||| |||||| Sbjct 312743 GGAGCGCGCTCAAGGCGAAGATCGCCGCTCAC------GGCGTCCGCAACAGCCTGCTGC 312690 Query 55500 TGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAACAACGAGGCGTTCGAGC 55559 | ||||| ||||| |||||||||||||| |||||| | |||||||| ||| || ||||| Sbjct 312689 TCGCGCCGATGCCGACCGCGTCGACGGCACAGATCCTCGGCAACAATGAGTCGATCGAGG 312630 Query 55560 CGTACACGACCAACATCTACCTGCGCCGGACCCTAGCAGGTGAGTTTGTCATGATCAACA 55619 ||||||||| |||||||||| ||| || || | || ||||| || ||||| Sbjct 312629 CGTACACGAGCAACATCTACTCGCGGCGCGTGCTCTCCGGCGAGTTCCAGATCGTCAACC 312570 Query 55620 AGCACCTCGTCAAGGACCTGCAGAAGATCAACAAGTGGAACCCGCAGATCAAGA--CGGA 55677 | ||||| | |||||||| || | | |||| || || || |||| || | Sbjct 312569 ACCACCTGCTGAAGGACCTCACCGAGTGCGGCCTGTGGGACGACCACATGAAGAACCGCA 312510 Query 55678 T-ATTGTGCGGAACGGGGGGTCCGTCCAGAA--TC-TGGAGATTCCTCTGCGTCTCAAGG 55733 | || | |||| || ||||| ||||| || |||||| || || ||| Sbjct 312509 TCATCGCCGAGAAC---GGCTCCGTTCAGAACGTCGAGGAGATCCCGGACGACCTGAAGC 312453 Query 55734 AGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAGTGCTGATC 55793 || | ||| ||| || |||||||| | ||||||| | || ||||| ||| |||| Sbjct 312452 AGCTCTACAAGACCGTCTGGGAGATCTCGCAGAAGACGATAATCAACATGGCTGCCGATC 312393 Query 55794 GTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCC--TTCACT 55851 | || || | |||||||||| ||||| ||||| || | | | | || | || Sbjct 312392 GCGGCGCCTTCATCGACCAGAGTCAGTCACTGAATATTCACCTCGCCGAGCCGAATTAC- 312334 Query 55852 GGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTATGTA 55911 |||||| | | | |||||||| |||| |||||||||||| | ||||| || ||||| Sbjct 312333 -GCCAAGCTTACCAGCATGCACTTCTACGCGTGGAAGAAGGGCGTGAAGACCGGCATGTA 312275 Query 55912 CTATCTGCGGAC 55923 ||| ||||| || Sbjct 312274 CTACCTGCGCAC 312263 >seq698 Length=247709 Score = 138 bits (152), Expect = 1e-27 Identities = 268/391 (69%), Gaps = 5/391 (1%) Strand=Plus/Plus Query 158943 AAACTCGCGGATGCTGTGCGTCTCTCCAGTCGCAATCACAAAGTCCTCTGGACCGGGCTG 159002 ||||||||| | ||||||| ||| || ||||| || || ||||| || || || ||| Sbjct 39483 AAACTCGCGCACGCTGTGCACCTCGCCCGTCGCGATGACCAAGTCGTCCGGCGCGTCCTG 39542 Query 159003 TTGGAGCATGAGCCACATGGCCTCGACGTAATCCTGCGCGTGACCCCAGTCGCGCTTGGC 159062 || |||||| |||||||||| |||||||| || ||||||| ||||||||||| | Sbjct 39543 CTGCAGCATGCGCCACATGGCGTCGACGTAGTCGCGCGCGTGGCCCCAGTCGCGACGCGA 39602 Query 159063 ATCCATGTTCCCGAGCTCGATG-ACTTTTCCAGAC--TTTTTCCACTCAGCCAGACCGAG 159119 |||| ||| |||||||| | | || | | | | | || || | | | | Sbjct 39603 GTCCAGGTTGCCGAGCTCCACGCGCTCCTGCTGCCCGAGGTGGATCTTCGCGACAGCACG 39662 Query 159120 CGTGATCTTGCGCGTCACAAAC-TCTGCTCCGCGCCGTTCCGACTCATGGTTAAACAGAA 159178 ||||||||| ||||| || ||| ||| | || ||||| |||||| ||||| || || | Sbjct 39663 CGTGATCTTACGCGTGACGAACGTCT-CGCCACGCCGCGGCGACTCGTGGTTGAAGAGGA 39721 Query 159179 TGCCGGTACAAGCGAACAGGTTATAGGACTCGCGGTAATTTTTAGTTATCCAGTATCCAA 159238 ||||| | || ||| | | | |||| ||||||| | || |||||||| | Sbjct 39722 TGCCGTTGCACGCGTAGATGCCGTAGGCCTCGCGGAAGTTGACGACGATCCAGTAGGCGT 39781 Query 159239 AGAGCTTGGAGACGCCGTATGGACTCCGAGGATAAAATGGTGTCCCCTCATTTTGAATTG 159298 ||||||||| ||| |||| || || || || || || ||| |||| || | Sbjct 39782 AGAGCTTGGCGACCGCGTAGGGTGAGCGCGGGTAGAAAGGCGTCGTCTCACGCTGCGGTA 39841 Query 159299 GTTCCTGAACCTTTCCAAACATTTCACTCGT 159329 ||||| ||||| ||| | | |||||||| Sbjct 39842 TCTCCTGCACCTTGCCATAGAGCTCACTCGT 39872 Score = 116 bits (128), Expect = 4e-21 Identities = 240/352 (68%), Gaps = 15/352 (4%) Strand=Plus/Plus Query 124489 CGATAAACTCACGGATGCTGTGCGTCTCACCCGTGCCAATCACGAAATCTTCGGGAATCG 124548 ||| |||||| || | ||||||| ||| ||||| | || || || || || || Sbjct 39479 CGACAAACTCGCGCACGCTGTGCACCTCGCCCGTCGCGATGACCAAGTCGTCCGGCGCGT 39538 Query 124549 ACTGCTGCAACATAAGCCACATGGCTTGGACGTAGTCCTCTGCGTGCCCCCAGTCGCGCT 124608 |||||||| ||| |||||||||| | ||||||||| ||||| ||||||||||| Sbjct 39539 CCTGCTGCAGCATGCGCCACATGGCGTCGACGTAGTCGCGCGCGTGGCCCCAGTCGCGAC 39598 Query 124609 TGGCATCCAGGTTTCCGAGCTCGATTGGCT-----TGGCCGTCTTGTTCCACTCCGCCAA 124663 | |||||||| |||||||| | ||| || ||| || || ||| | Sbjct 39599 GCGAGTCCAGGTTGCCGAGCTCCACGCGCTCCTGCTGCCCG--AGGTGGATCTTCGCGAC 39656 Query 124664 ACCCAGTGTAATCTTGCGCGTCACAAA---CTCGGAACCGCGTCGCTCAGACTCGTGGTT 124720 | | | || ||||| ||||| || || |||| || || ||| ||||||||||| Sbjct 39657 AGCACGCGTGATCTTACGCGTGACGAACGTCTCG---CCACGCCGCGGCGACTCGTGGTT 39713 Query 124721 GAACAGAATGCCAGTACACGCAAACATCCCGTACGACTCGCGGTAGTTTTTCGTC-ATCC 124779 ||| || ||||| | ||||| | || ||||| | ||||||| || || || | |||| Sbjct 39714 GAAGAGGATGCCGTTGCACGCGTAGATGCCGTAGGCCTCGCGGAAG-TTGACGACGATCC 39772 Query 124780 AATACCCAAAGAGCTTGGACACGCCATAGGGGCTTCGGGGGTAGAATGGGGT 124831 | || | ||||||||| || | ||||| || |||||||| || || Sbjct 39773 AGTAGGCGTAGAGCTTGGCGACCGCGTAGGGTGAGCGCGGGTAGAAAGGCGT 39824 >seq14 Length=1569860 Score = 100 bits (110), Expect = 3e-16 Identities = 100/127 (79%), Gaps = 2/127 (2%) Strand=Plus/Plus Query 152029 GTGAAGATGTATCGGGAGCTGGCCGCA-TCCTTGCCACCTGCCAGCCGCGTTCCAAACTG 152087 ||||||||||| |||| ||||| |||| |||||||| || ||| ||||| |||||||| Sbjct 334840 GTGAAGATGTAACGGGGGCTGG-CGCAGTCCTTGCCTCCGTGCAGGCGCGTACCAAACTG 334898 Query 152088 TCCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCAC 152147 || |||| || ||||||| ||||||| ||| || || |||||||| | |||||| Sbjct 334899 ACCGATCGGCTGCAGCAGGTTGATGTTGTTGCTGCCGACAAAGTTCTGAGCGAGATTCAC 334958 Query 152148 AATCGTG 152154 |||||| Sbjct 334959 GATCGTG 334965 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546808413002600