Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq117 230 3e-55 seq1300 158 1e-33 seq698 140 4e-28 seq24 89.7 6e-13 seq22 89.7 6e-13 seq14 82.4 9e-11 >seq117 Length=549210 Score = 230 bits (254), Expect = 3e-55 Identities = 1062/1660 (64%), Gaps = 70/1660 (4%) Strand=Plus/Plus Query 80038 GTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAGAA 80097 || ||||| ||||||||||| ||||| | |||||||||||| |||| | |||||| Sbjct 312263 GTGCGCAGGTAGTACATGCCGGTCTTCACGCCCTTCTTCCACGCGTAGAAGTGCATGCTG 312322 Query 80098 CTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGACAGATG 80157 | ||||| || | || | | | | || ||||| |||||| ||| |||| Sbjct 312323 GTAAGCTTGGCGTAATTCGGCTCGGCGAGGTGAATATTCAGTGACTGACTCTGGTCGATG 312382 Query 80158 AAAGCCCCACGATCTGCCGCCATTTCAATAATTGACTTTTGTGGAATTTCCCATACTGTA 80217 || || || ||||| || ||||| | || || | ||| || | || ||||| || || Sbjct 312383 AAGGCGCCGCGATCGGCAGCCATGTTGATTATCGTCTTCTGCGAGATCTCCCAGACGGTC 312442 Query 80218 CGATACACCTTACGAAGCTCCTCTGGAATGTCCA-GA--TTTTGCACACTGCCACCGTCC 80274 || | || || || || || || ||| || || || || ||| || Sbjct 312443 TTGTAGAGCTGCTTCAGGTCGTCCGGGATCTCCTCGACGTTCTGAACGGAGCCGTTCTCG 312502 Query 80275 TTTACAATTTGATTTTTCAATTCAGACGTCC-AGACACCAAGCTTGTGCAGATCTTTCAC 80333 | || | || |||| | | ||||| | | || || | || || |||| Sbjct 312503 GCGATGATGCGGTTCTTCATGTG-GTCGTCCCACAGGCCGCACTCGGTGAGGTCCTTCAG 312561 Query 80334 AAGGTGCTTGTTAATCATGACAAACTCTCCCGCGAGGGTGCGACGCAGATACAGGTTTGT 80393 ||||| | ||| | || ||||| || | ||| ||| ||| || | ||| | Sbjct 312562 CAGGTGGTGGTTGACGATCTGGAACTCGCCGGAGAGCACGCGCCGCGAGTAGATGTTGCT 312621 Query 80394 AGTGTAAGGCTCAAATGCCTCGTTGTTTCCGAGGATCTGAGCCGTGCTCGCCGTCGGCAT 80453 ||||| | ||| | | ||| ||||| ||||||||||| ||||| ||| |||||||| Sbjct 312622 CGTGTACGCCTCGATCGACTCATTGTTGCCGAGGATCTGTGCCGTCGACGCGGTCGGCAT 312681 Query 80454 CGGGCCGACCAACAGTGAATTCCGCAGGCCGTG---------CTTC---TTGATATCCTC 80501 ||| ||| || ||| || || | |||||| |||| |||| | | Sbjct 312682 CGGCGCGAGCAGCAGGCTGTTGCGGACGCCGTGAGCGGCGATCTTCGCCTTGAG---CGC 312738 Query 80502 GCGCAAATCTGACCAAAAATCAACCCCAACGCTGTGAC--CCCACATGTCGTGCTGCAAG 80559 || | | || ||| | || | || || |||||||||||| ||||| | Sbjct 312739 GCTCCAGTC---CCAGAGGTCGGTG-----GGGGTCACGCCCCACATGTCGTACTGCAGG 312790 Query 80560 ATGCCCT--CCGACGCCGGAGACCCCGCGAACGTCTCGTACGGGCCCTCCGTCTTGGCCA 80617 | ||||| | |||| | || || ||| |||||||||| ||||| | ||| || | Sbjct 312791 ACGCCCTTGCTGACGGGGCAG--CCGGCGTACGTCTCGTAGGGGCCAAGCTTCTCCGCGA 312848 Query 80618 GCTCACA---CGACTCCATAAGGGCCGCGTGATAAATGCACTCAAAGACGCCCTTGTTCA 80674 |||| || || ||||| | || ||| || || |||| || | |||||| | Sbjct 312849 GCTCGCAGCTCGCCTCCA---GCGCGCCGTAGTATATCGACTCGAATATCTGCTTGTTGA 312905 Query 80675 CACCGC-GCGCCTG-TGGGTCGTCGAACGACAAGCCCATCATCATGAACACGTCAGCCAG 80732 | || | || || | | || ||||||| ||||| ||| | |||||| |||| || || Sbjct 312906 G-CAGCTGGGCTTGCTCGCTC-TCGAACGGCAAGCGCATGAGGATGAACGCGTCGGCGAG 312963 Query 80733 GCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATCGCTCGGCCTCCGGAAT 80792 ||||||||||||||| ||||||| ||||||||| |||||||||| |||||| || Sbjct 312964 ACCCTGAACGCCGATGCCGATCGGACGGTGGCGCATGTTCGATCGGCGCGCCTCCTCAAC 313023 Query 80793 TGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACAACCCGTGTAACATC 80852 ||||| ||||| | ||||||| ||| |||||||| || | ||| || || || Sbjct 313024 CGGGTAGAAGTTGATGTCGATGATCTTGTTGAGGTTGCGCGTGATGACCTTCGTCACGTC 313083 Query 80853 ATGAAGTTTCTGAAAGTCGAA---TTGGTTCCCCTTCAC--AAATGCCGGAAGGCTCAGG 80907 | || || | |||||| | | || | | ||| | ||| | || | Sbjct 313084 CTTCAGCTTGCGGAAGTCGTACGTCTTGTCCGCGCGCACGTACATGTTG--AGCGCGACC 313141 Query 80908 GACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCCGTGCAC 80967 || || || ||||| |||||| ||| || | | |||||||||||||||||||| Sbjct 313142 GAGGCGAGGTTGCAGACGGCCGTCTCATCGGGCGACGAGTACTCGACGATTTCCGTGCAC 313201 Query 80968 AAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAGCGTCC 81027 | || ||||||| || || ||||| | |||||| |||||| ||||| |||||| Sbjct 313202 AGGTTGCTGCACTTAATGGTGCCGAGGTTCTGCTGGTTCGACTTGCGATTGCACGCGTCC 313261 Query 81028 TTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCCAAATC 81087 |||||| |||||| || || || || || ||| || | | |||||||| ||| | | Sbjct 313262 TTGTAGAGCATGTAGGGAGTTCCCGTTTCCGTCTGCGATTCCATGATGGCGTACCACAGC 313321 Query 81088 TCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACATACTTGGCGTA---AGCT 81144 | | || |||| | | | | | |||||| | | ||||||| ||| |||| Sbjct 313322 TGCTGTGCTTTGATCGTCCTTCTCACTTTGCCCTGCTTTTCGTACTTGGTGTAGAGAGCT 313381 Query 81145 TCGTCGAACTTGGC-ACCGTGAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACATCAG 81203 ||||| | | | || | || || | | | | ||||| || || ||||| || Sbjct 313382 ---TCGAATTCGTCGCCCCAGCAG-TCGGCCAAGCCCGGGCATTCCGCCGGACACATGAG 313437 Query 81204 GTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGGT 81263 |||||| | | || || | ||||||| || ||||||||||| || Sbjct 313438 AGACCAGTCCTGATTGAGTTCGACCCTCGTCATGAACAGATCCGGGATCCAGAGCCCGTA 313497 Query 81264 GAACAGGTCGCGGCAGCGCGCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAGTC 81323 ||||||||| | ||| ||||| | || ||| | |||||||| || Sbjct 313498 GAACAGGTCTCTCGCTCGCTGTTCCTCCTTCCCGGTGTTCTTCTTGCAGTCGAGAAACTC 313557 Query 81324 CATGATGTCCGCATGCCATGGCTCCAGATAC------ACGGCGATCGACCCCTTGCGACG 81377 | ||||||||| ||||| ||||| || ||| | |||| || | |||| Sbjct 313558 GAAGATGTCCGCGTGCCACGGCTCGAGGTACATCGCAAAGGCGCCCGGACGCTTG---TT 313614 Query 81378 GCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACC 81437 ||| ||||||| |||||| | || || || || || |||| ||| || | || || Sbjct 313615 GCCGCCCTGGTCGACGTACCTCGCCGTGTTATTGAAGACTCGCAGCATGGGAAGGAGGCC 313674 Query 81438 ATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCACCTTGCTGATTGA 81497 | || ||||| || || |||| ||| |||||| | ||| || Sbjct 313675 GTTCGAGCAGCCGTTGGTGCCGGCGATGTAGCTTCCCGAGGCGCGGATGTTGTGTATGTT 313734 Query 81498 AAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCATAAAT 81557 | |||||||| |||| |||| || || | || || |||| || || || || Sbjct 313735 GACGCCGATGCCTCCTGCGGACTTCGATATGAGCGCGCATTCCTTCAGCGTGTCGTAGAT 313794 Query 81558 TCCCTCGATGCTATCTTTTTTCAT-GTCAAGCAAGAAACAGCTTGACATCTGAGGGCTTT 81616 ||||||||||| || | ||||| ||| |||| ||| ||||| || | ||| || | Sbjct 313795 GCCCTCGATGCTGTCGTCCTTCATCGTC-AGCAGGAAGCAGCTGGAGAGCTGCGGACGCG 313853 Query 81617 TTGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAA 81656 | |||||| ||||| || || || | |||||| |||| Sbjct 313854 GCGTGCCGGCGTTGAAGAGCGTCGGCGACGCGTGCGTGAA 313893 >seq1300 Length=83366 Score = 158 bits (174), Expect = 1e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| ||||| || || || ||||| || || | || || ||| || | Sbjct 7664 ATGCAGATCTTTGTAAAGACCCTGACTGGTAAGACCATCACCTTGGAAGTAGAGGCATCT 7723 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || ||||||| ||| ||||||| ||||| ||||||||||||||||| || || || || Sbjct 7724 GACAGCATTGAAAACGTGAAGGCCAAAATCCAGGACAAGGAGGGAATCCCCCCGGATCAA 7783 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || || || || ||||| || || |||| || || || | ||||| || Sbjct 7784 CAGCGCCTGATCTTCGCCGGAAAGCAGCTGGAAGATGGCCGCACTCTGTCCGACTACAAC 7843 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || |||||||| || || ||||||| || || || Sbjct 7844 ATCCAGAAGGAGTCTACTCTTCACCTGGTTCTGCGTCTGCGTGGAGG 7890 Score = 150 bits (166), Expect = 2e-31 Identities = 163/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| |||||||| || || |||||||| || || | || || ||| || | Sbjct 7892 ATGCAAATCTTCGTCAAGACCCTGACTGGCAAGACCATCACCTTAGAAGTAGAGGCATCT 7951 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || |||||| ||| ||||||| ||||| ||||||||||||||||| || || || || Sbjct 7952 GACTGCATTGAAAACGTGAAGGCCAAAATCCAGGACAAGGAGGGAATCCCCCCGGATCAA 8011 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || || || || || || || || |||| || || || | ||||| || Sbjct 8012 CAGCGCCTGATCTTCGCCGGAAAACAGCTGGAAGATGGCCGCACTCTGTCCGACTACAAC 8071 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGT 27621 |||| ||||| || |||||||| || || ||||| Sbjct 8072 ATCCAGAAGGAGTCTACTCTTCACCTGGTTCTGCGT 8107 >seq698 Length=247709 Score = 140 bits (154), Expect = 4e-28 Identities = 261/378 (69%), Gaps = 13/378 (3%) Strand=Plus/Minus Query 24723 TTTTATCAGGCGGGTACGAGTGAGATGTTTGGCAAGGTGCAGGAGACGCCACAGTCGGAG 24782 || || ||||| |||||||||| | | ||||||||||||||||| || ||| ||| Sbjct 39887 TTCTACCAGGCATCTACGAGTGAGCTCTATGGCAAGGTGCAGGAGATACCGCAGCGTGAG 39828 Query 24783 ACCACTCCATTTTATCCGCGAAGCCCGTATGGGGTCTCAAAGGTGTTCGCGTACTGGATA 24842 || || || || || ||||| || || | |||| | ||| | | ||| |||||||| Sbjct 39827 ACGACGCCTTTCTACCCGCGCTCACCCTACGCGGTCGCCAAGCTCTACGCCTACTGGATC 39768 Query 24843 ACCAAGAACTACCGTGAGGCCCATGGGATATATGCATGCAACGGAATTCTGTTCAACCAT 24902 | |||| ||| |||||| | || || || || |||||||| || || |||||||| Sbjct 39767 GTCGTCAACTTCCGCGAGGCCTACGGCATCTACGCGTGCAACGGCATCCTCTTCAACCAC 39708 Query 24903 GAGTCGGAGCGTCGGGGACCTGA-ATTTGTTACACGAAAGATTACTCTTGGTATTGACCA 24961 |||||| ||| || || | || || || || || ||||| || | || | | | | | Sbjct 39707 GAGTCGCCGCGGCGTGG-CGAGACGTTCGTCACGCGTAAGATCACGCGTGCTGTCG-CGA 39650 Query 24962 TTGGATCAAGACAAGGGCA-------CCTATTGAGCTGGGAAACCTAGATGCCAAACGTG 25014 |||| | | ||||| | | ||||| || ||||| || | || | Sbjct 39649 --AGATCCA-CCTCGGGCAGCAGGAGCGCGTGGAGCTCGGCAACCTGGACTCGCGTCGCG 39593 Query 25015 ATTGGGGGCATGCAGCCGACTACGTCGACGCCATGTGGCGCATGCTCCAACAGAATAAGC 25074 | ||||| || || |||||||||||||||||||||||||||||| || ||| | || Sbjct 39592 ACTGGGGCCACGCGCGCGACTACGTCGACGCCATGTGGCGCATGCTGCAGCAGGACGCGC 39533 Query 25075 CAGAGGATTTTGTGATCG 25092 | || || || || |||| Sbjct 39532 CGGACGACTTGGTCATCG 39515 >seq24 Length=941673 Score = 89.7 bits (98), Expect = 6e-13 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| ||||| ||||| || ||||| || || ||||||||||| | || Sbjct 529596 ATGCAGATCTTTGTGAAGACTCTTACTGGAAAGACCATCACCCTTGAGGTTGAACCCAGT 529537 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGG 27509 || |||||| |||| | ||||| || ||||| || ||||| || Sbjct 529536 GACTGCATTGAAAATGTAAAGGCAAAGATTCAAGATAAGGAAGG 529493 Score = 87.8 bits (96), Expect = 2e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 27508 GGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGT 27567 ||||||||||| || |||||||| || || ||||| || || || || ||||||| || Sbjct 528747 GGAATTCCTCCGGATCAGCAGCGGCTGATATTTGCCGGGAAACAGCTGGAGGATGGACGC 528688 Query 27568 ACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCA 27608 || || | || || ||| |||||||||| ||||||||||| Sbjct 528687 ACTCTTTCGGATTACAATATCCAAAAGGAGTCCACTCTTCA 528647 >seq22 Length=945789 Score = 89.7 bits (98), Expect = 6e-13 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| || || ||||| || || || ||||| |||||||| || | || Sbjct 475606 ATGCAGATCTTTGTGAAAACCCTTACTGGGAAAACCATTACCCTTGAGGTGGAAGCCAGT 475547 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGG 27509 ||| ||| | ||| ||||||||||||| ||||||||||| || Sbjct 475546 GATTCCATAGAGAATGTGAAGGCTAAAATCCAGGACAAGGAAGG 475503 >seq14 Length=1569860 Score = 82.4 bits (90), Expect = 9e-11 Identities = 98/128 (77%), Gaps = 4/128 (3%) Strand=Plus/Minus Query 32124 CACCATTGTCAACCTTGCTCAGAACTTTGTCGGTGCAAATAACCTGAACTTACTCGAGCC 32183 ||| || || || || ||||||||||||||||| || ||| | ||| | || |||| Sbjct 334965 CACGATCGTGAATCTCGCTCAGAACTTTGTCGGCAGCAACAACATCAACCTGCTGCAGCC 334906 Query 32184 -ATCTGGACAGTTTGGGACCCGGCTCGCCGGTGGCAAGGA-TGCTGCGAGCTCCCGTTAC 32241 ||| || |||||||| || || || ||| |||||||| ||| || ||| |||||||| Sbjct 334905 GATC-GGTCAGTTTGGTACGCGCCTGCACGGAGGCAAGGACTGC-GCCAGCCCCCGTTAC 334848 Query 32242 ATCTTCAC 32249 |||||||| Sbjct 334847 ATCTTCAC 334840 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 569885611427440