Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq1300 118 9e-22 seq7865 109 5e-19 >seq1300 Length=83366 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| |||||||| || ||||| || ||| | || || | ||||| || | || Sbjct 7664 ATGCAGATCTTTGTAAAGACCCTGACTGGTAAGACCATCACCTTGGAAGTAGAGGCATCT 7723 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| ||||| | || || ||||| || ||||| || || || || || |||||| Sbjct 7724 GACAGCATTGAAAACGTGAAGGCCAAAATCCAGGACAAGGAGGGAATCCCCCCGGATCAA 7783 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | |||||| || || ||||||| | || | ||||| |||||| Sbjct 7784 CAGCGCCTGATCTTCGCCGGAAAGCAGCTGGAAGATGGCCGCACTCTGTCCGACTACAAC 7843 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || |||||||| || | || ||||| ||||| |||| || ||||| Sbjct 7844 ATCCAGAAGGAGTCTACTCTTCACCTGGTTCTGCGTCTGCGTGGAGGCAT 7893 Score = 107 bits (118), Expect = 2e-18 Identities = 154/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 |||||| || || || || || ||||| |||||| | || || | ||||| || | || Sbjct 7891 CATGCAAATCTTCGTCAAGACCCTGACTGGCAAGACCATCACCTTAGAAGTAGAGGCATC 7950 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 |||| ||||| | || || ||||| || ||||| || || || || || ||||| Sbjct 7951 TGACTGCATTGAAAACGTGAAGGCCAAAATCCAGGACAAGGAGGGAATCCCCCCGGATCA 8010 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 |||||| | || | |||||| ||||| ||||||| | || | ||||| ||||| Sbjct 8011 ACAGCGCCTGATCTTCGCCGGAAAACAGCTGGAAGATGGCCGCACTCTGTCCGACTACAA 8070 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGT 27203 ||| || |||||||| || | || ||||| ||||| Sbjct 8071 CATCCAGAAGGAGTCTACTCTTCACCTGGTTCTGCGT 8107 >seq7865 Length=4356 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| ||||| ||||| || ||||| || | || || ||||| || || | Sbjct 3593 CATGCAGATCTTTGTGAAAACCCTCACCGGTAAAACCATCACCCTTGAGGTCGAGGCAAG 3534 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 || |||||||| | || || || || ||||||||||| ||||| || || ||||| Sbjct 3533 TGATTCGATTGAAAATGTGAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCGGATCA 3474 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||| | || || | || ||||| || ||||||| || || | || ||||| Sbjct 3473 GCAGAGGTTGATCTTTGCTGGCAAGCAGCTGGAAGATGGTCGCACTCTGAGTGACTACAA 3414 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 ||| || |||||||| ||| | || |||| ||||| |||| ||||| Sbjct 3413 CATCCAGAAGGAGTCTACCCTTCACCTGGTCCTGCGTCTGCGTGGTGG 3366 Score = 105 bits (116), Expect = 6e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| ||||| ||||| || ||||| || | || || ||||| || || | Sbjct 3821 CATGCAGATCTTTGTGAAAACCCTCACCGGTAAAACCATCACCCTTGAGGTAGAGGCAAG 3762 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| || || || | || || || || ||||||||||| ||||| || || ||||| Sbjct 3761 CGATTCAATCGAAAATGTGAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCAGATCA 3702 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||| | || || | || ||||| || ||||||| || || | || ||||| Sbjct 3701 GCAGAGGTTGATCTTTGCTGGCAAGCAGCTGGAAGATGGTCGCACTCTGAGTGACTACAA 3642 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||| || |||||||| ||| | || | || ||||| |||| |||||||| Sbjct 3641 CATCCAGAAGGAGTCTACCCTTCACCTTGTCCTGCGTCTGCGTGGTGGCAT 3591 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434594456466240