Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19]
59,587 sequences; 511,738,253 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq1300 118 9e-22
seq7865 109 5e-19
>seq1300
Length=83366
Score = 118 bits (130), Expect = 9e-22
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| |||||||| || ||||| || ||| | || || | ||||| || | ||
Sbjct 7664 ATGCAGATCTTTGTAAAGACCCTGACTGGTAAGACCATCACCTTGGAAGTAGAGGCATCT 7723
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| ||||| | || || ||||| || ||||| || || || || || ||||||
Sbjct 7724 GACAGCATTGAAAACGTGAAGGCCAAAATCCAGGACAAGGAGGGAATCCCCCCGGATCAA 7783
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||||| | || | |||||| || || ||||||| | || | ||||| ||||||
Sbjct 7784 CAGCGCCTGATCTTCGCCGGAAAGCAGCTGGAAGATGGCCGCACTCTGTCCGACTACAAC 7843
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || |||||||| || | || ||||| ||||| |||| || |||||
Sbjct 7844 ATCCAGAAGGAGTCTACTCTTCACCTGGTTCTGCGTCTGCGTGGAGGCAT 7893
Score = 107 bits (118), Expect = 2e-18
Identities = 154/217 (71%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
|||||| || || || || || ||||| |||||| | || || | ||||| || | ||
Sbjct 7891 CATGCAAATCTTCGTCAAGACCCTGACTGGCAAGACCATCACCTTAGAAGTAGAGGCATC 7950
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
|||| ||||| | || || ||||| || ||||| || || || || || |||||
Sbjct 7951 TGACTGCATTGAAAACGTGAAGGCCAAAATCCAGGACAAGGAGGGAATCCCCCCGGATCA 8010
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
|||||| | || | |||||| ||||| ||||||| | || | ||||| |||||
Sbjct 8011 ACAGCGCCTGATCTTCGCCGGAAAACAGCTGGAAGATGGCCGCACTCTGTCCGACTACAA 8070
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGT 27203
||| || |||||||| || | || ||||| |||||
Sbjct 8071 CATCCAGAAGGAGTCTACTCTTCACCTGGTTCTGCGT 8107
>seq7865
Length=4356
Score = 109 bits (120), Expect = 5e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| ||||| ||||| || ||||| || | || || ||||| || || |
Sbjct 3593 CATGCAGATCTTTGTGAAAACCCTCACCGGTAAAACCATCACCCTTGAGGTCGAGGCAAG 3534
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
|| |||||||| | || || || || ||||||||||| ||||| || || |||||
Sbjct 3533 TGATTCGATTGAAAATGTGAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCGGATCA 3474
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
||| | || || | || ||||| || ||||||| || || | || |||||
Sbjct 3473 GCAGAGGTTGATCTTTGCTGGCAAGCAGCTGGAAGATGGTCGCACTCTGAGTGACTACAA 3414
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
||| || |||||||| ||| | || |||| ||||| |||| |||||
Sbjct 3413 CATCCAGAAGGAGTCTACCCTTCACCTGGTCCTGCGTCTGCGTGGTGG 3366
Score = 105 bits (116), Expect = 6e-18
Identities = 162/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| ||||| ||||| || ||||| || | || || ||||| || || |
Sbjct 3821 CATGCAGATCTTTGTGAAAACCCTCACCGGTAAAACCATCACCCTTGAGGTAGAGGCAAG 3762
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
||| || || || | || || || || ||||||||||| ||||| || || |||||
Sbjct 3761 CGATTCAATCGAAAATGTGAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCAGATCA 3702
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
||| | || || | || ||||| || ||||||| || || | || |||||
Sbjct 3701 GCAGAGGTTGATCTTTGCTGGCAAGCAGCTGGAAGATGGTCGCACTCTGAGTGACTACAA 3642
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||| || |||||||| ||| | || | || ||||| |||| ||||||||
Sbjct 3641 CATCCAGAAGGAGTCTACCCTTCACCTTGTCCTGCGTCTGCGTGGTGGCAT 3591
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434594456466240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |