Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_028696.2 Length=41338 Score E Sequences producing significant alignments: (Bits) Value seq14089 154 4e-33 seq12792 100 8e-17 seq12230 82.4 2e-11 >seq14089 Length=980 Score = 154 bits (170), Expect = 4e-33 Identities = 348/519 (67%), Gaps = 3/519 (1%) Strand=Plus/Plus Query 16753 TGAAGTGGTCAACAAAAACTGGCCACCGAGTTAGAGTTTTTTCCAGTATCGATTTTCCGA 16812 || ||||||||| ||| ||| || | ||||||||| ||| || |||||||| | Sbjct 275 TGTAGTGGTCAAGTAAATTTGGTCAGAGTTTTAGAGTTTAC-CCAATACCGATTTTCTGC 333 Query 16813 TTCGTTTGGTGGTAACCCACCATTATATTCGTGCGGTCTTAGTGCGCTGTAATATCCAAC 16872 |||||||| | ||||||| |||||| ||| ||||| | ||||||||| |||| Sbjct 334 ATCGTTTGGAGATAACCCATCATTATGACGGTGTGGTCTAACCTGGCTGTAATAGCCAAT 393 Query 16873 GATATAGTCCGTTATTGCGTGAGCTGCATCGCTGAAGCTTACATAGCCCGTCGCCGGCAC 16932 ||| |||||| | || || ||| || | || | | | || | || || Sbjct 394 GATGTAGTCCAGCACTGTCTGCTTTGCTTCAATAAATGATTGAAAACCTACTTCAGGTAC 453 Query 16933 CCATTCGTTCTTCAGACTCCTGAAGAAGCGCTCCATTGGGCTGTTATCCCAGCAGTTTCC 16992 |||||| | || | |||||| || || |||||||| || || ||||| || || || Sbjct 454 CCATTCACTTTTTAAACTCCTAAAAAATCGCTCCATCGGTGCATTGTCCCAACAATTACC 513 Query 16993 ACGCCGACTCATACTCTGCCTGATCCGGTATCTCCACAGTAACTGCCGGAACTGCCTGCT 17052 || |||||||| || || | ||| | || | ||| || | || | ||| | | | || Sbjct 514 TCGACGACTCATGCTTTGTTTTATCTGATAACGCCAAAGCAGTTGTCTGAAATACGTACT 573 Query 17053 CGTATAATGACTGCCTTGATCGCTGTGGAACATCACCCCGACG-GGCTTACCACGGGTTT 17111 ||||| |||| |||||||| || ||||| || | ||| || ||||| | | Sbjct 574 GGTATAGTGACACCCTTGATCAGAATGAAACATGACAC-GACTCGGTTTACCTCTTCGCT 632 Query 17112 CCCATGCCATTTCCAGTGCTTTCATGGTAAGCCTGCTGTCCGGCGAGAACGACATGGCCC 17171 | | ||||| |||||||| ||| || || ||||| || ||||| |||| Sbjct 633 CATAAGCCATGCTCAGTGCTTGGCCGGTTAGTTGTGAGTTAGGCGATAATGACATCGCCC 692 Query 17172 AGCCCACTGGTTTTCTTGCGAACAGGTCGAGAACAACGGCGAGGTACGCCCAGCGCTTAC 17231 | || || || ||||| || | | || | ||| || || | || ||||| || | Sbjct 693 AACCAACAGGCTTTCTGGCATATAAATCCATAACTACTGCCAAATAAGCCCAACGACGCC 752 Query 17232 CCGTCCAGATATAGGTCACATCACCGCACCACACCTGAT 17270 ||| ||| ||||| || |||||||||||||| |||| || Sbjct 753 CCGACCAAATATACGTTACATCACCGCACCAGACCTCAT 791 Score = 154 bits (170), Expect = 4e-33 Identities = 348/519 (67%), Gaps = 3/519 (1%) Strand=Plus/Plus Query 39378 TGAAGTGGTCAACAAAAACTGGCCACCGAGTTAGAGTTTTTTCCAGTATCGATTTTCCGA 39437 || ||||||||| ||| ||| || | ||||||||| ||| || |||||||| | Sbjct 275 TGTAGTGGTCAAGTAAATTTGGTCAGAGTTTTAGAGTTTAC-CCAATACCGATTTTCTGC 333 Query 39438 TTCGTTTGGTGGTAACCCACCATTATATTCGTGCGGTCTTAGTGCGCTGTAATATCCAAC 39497 |||||||| | ||||||| |||||| ||| ||||| | ||||||||| |||| Sbjct 334 ATCGTTTGGAGATAACCCATCATTATGACGGTGTGGTCTAACCTGGCTGTAATAGCCAAT 393 Query 39498 GATATAGTCCGTTATTGCGTGAGCTGCATCGCTGAAGCTTACATAGCCCGTCGCCGGCAC 39557 ||| |||||| | || || ||| || | || | | | || | || || Sbjct 394 GATGTAGTCCAGCACTGTCTGCTTTGCTTCAATAAATGATTGAAAACCTACTTCAGGTAC 453 Query 39558 CCATTCGTTCTTCAGACTCCTGAAGAAGCGCTCCATTGGGCTGTTATCCCAGCAGTTTCC 39617 |||||| | || | |||||| || || |||||||| || || ||||| || || || Sbjct 454 CCATTCACTTTTTAAACTCCTAAAAAATCGCTCCATCGGTGCATTGTCCCAACAATTACC 513 Query 39618 ACGCCGACTCATACTCTGCCTGATCCGGTATCTCCACAGTAACTGCCGGAACTGCCTGCT 39677 || |||||||| || || | ||| | || | ||| || | || | ||| | | | || Sbjct 514 TCGACGACTCATGCTTTGTTTTATCTGATAACGCCAAAGCAGTTGTCTGAAATACGTACT 573 Query 39678 CGTATAATGACTGCCTTGATCGCTGTGGAACATCACCCCGACG-GGCTTACCACGGGTTT 39736 ||||| |||| |||||||| || ||||| || | ||| || ||||| | | Sbjct 574 GGTATAGTGACACCCTTGATCAGAATGAAACATGACAC-GACTCGGTTTACCTCTTCGCT 632 Query 39737 CCCATGCCATTTCCAGTGCTTTCATGGTAAGCCTGCTGTCCGGCGAGAACGACATGGCCC 39796 | | ||||| |||||||| ||| || || ||||| || ||||| |||| Sbjct 633 CATAAGCCATGCTCAGTGCTTGGCCGGTTAGTTGTGAGTTAGGCGATAATGACATCGCCC 692 Query 39797 AGCCCACTGGTTTTCTTGCGAACAGGTCGAGAACAACGGCGAGGTACGCCCAGCGCTTAC 39856 | || || || ||||| || | | || | ||| || || | || ||||| || | Sbjct 693 AACCAACAGGCTTTCTGGCATATAAATCCATAACTACTGCCAAATAAGCCCAACGACGCC 752 Query 39857 CCGTCCAGATATAGGTCACATCACCGCACCACACCTGAT 39895 ||| ||| ||||| || |||||||||||||| |||| || Sbjct 753 CCGACCAAATATACGTTACATCACCGCACCAGACCTCAT 791 >seq12792 Length=1384 Score = 100 bits (110), Expect = 8e-17 Identities = 146/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 39553 GGCACCCATTC-GTTCTTCAGACTCCTGAAGAAGCGCTCCATTGGGCTGTTATCCCAGCA 39611 |||| |||||| ||| | || || ||||| || ||||||||||| |||||||||||| Sbjct 1080 GGCATCCATTCTGTTTTATAG-CTTCTGAAAAAACGCTCCATTGGCGCGTTATCCCAGCA 1022 Query 39612 GTTTCCACGCCGACTCATACTCTGCCTGATCCGGTATCTCCACAGTAACTGCCGGAACTG 39671 || |||||||| |||||||| || | || | |||| ||| ||| || || | | Sbjct 1021 ATTGCCACGCCGGCTCATACTTTGTGTTATTTGATATCGCCATAGTCGTTGTCGATATTT 962 Query 39672 CCTGCTCGTATAATGACTGCCTTGATCGCTGTGGAACATCACCCCGACGGGCTTACCACG 39731 | ||| || ||||||| ||| || || ||| ||||| || || || |||| || Sbjct 961 CAAGCTTGTGTAATGACAGCCCTGGTCAGAGTGAAACATGACGCCTTTCGGTCTACCGCG 902 Query 39732 GGTTTCCCATGCCATTTCCAGTGC 39755 | |||| | |||||| |||||| Sbjct 901 GCTTTCATAAGCCATTCGCAGTGC 878 Score = 100 bits (110), Expect = 8e-17 Identities = 146/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 16928 GGCACCCATTC-GTTCTTCAGACTCCTGAAGAAGCGCTCCATTGGGCTGTTATCCCAGCA 16986 |||| |||||| ||| | || || ||||| || ||||||||||| |||||||||||| Sbjct 1080 GGCATCCATTCTGTTTTATAG-CTTCTGAAAAAACGCTCCATTGGCGCGTTATCCCAGCA 1022 Query 16987 GTTTCCACGCCGACTCATACTCTGCCTGATCCGGTATCTCCACAGTAACTGCCGGAACTG 17046 || |||||||| |||||||| || | || | |||| ||| ||| || || | | Sbjct 1021 ATTGCCACGCCGGCTCATACTTTGTGTTATTTGATATCGCCATAGTCGTTGTCGATATTT 962 Query 17047 CCTGCTCGTATAATGACTGCCTTGATCGCTGTGGAACATCACCCCGACGGGCTTACCACG 17106 | ||| || ||||||| ||| || || ||| ||||| || || || |||| || Sbjct 961 CAAGCTTGTGTAATGACAGCCCTGGTCAGAGTGAAACATGACGCCTTTCGGTCTACCGCG 902 Query 17107 GGTTTCCCATGCCATTTCCAGTGC 17130 | |||| | |||||| |||||| Sbjct 901 GCTTTCATAAGCCATTCGCAGTGC 878 >seq12230 Length=1820 Score = 82.4 bits (90), Expect = 2e-11 Identities = 149/215 (69%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 16928 GGCACCCATTCGTTCTTCAGACTCCTGAAGAAGCGCTCCATTGGGCTGTTATCCCAGCAG 16987 |||| ||||||| | || | || || ||| | || ||||| || ||||||||||| Sbjct 630 GGCATCCATTCGGTTTTGAAGCTTCTAAAGCACCGTTCCATGGGAGCATTATCCCAGCAA 689 Query 16988 TTTCCACGCCGACTCATACTCTGCCTGATCCGGTATCTCCACAGTAACTGCCG--GAACT 17045 || ||||| || ||||||||||| |||| ||||| ||| || ||| | || Sbjct 690 TTACCACGGCGGCTCATACTCTGTTTGATTTTGTATCGCCA---TAGCTGTTGAATAAAG 746 Query 17046 GC-CTGCTCGTATAATGACTGCCTTGATCGCTGTGGAACATCACCCCGACGGGCTTACCA 17104 || ||||||| ||||| | ||||||||| |||||||| ||| || ||||| Sbjct 747 GCTTTGCTCGTGTAATGGCAGCCTTGATCCGAATGGAACATGACCTTTTGAGGTTTACCT 806 Query 17105 CGGGTTTCCCATGCCATTTCCAGTGCTTTCATGGT 17139 | || ||| | || | || || ||||| ||||| Sbjct 807 CTGGCTTCATAAGCGACTTGTAGCGCTTTTATGGT 841 Score = 82.4 bits (90), Expect = 2e-11 Identities = 149/215 (69%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 39553 GGCACCCATTCGTTCTTCAGACTCCTGAAGAAGCGCTCCATTGGGCTGTTATCCCAGCAG 39612 |||| ||||||| | || | || || ||| | || ||||| || ||||||||||| Sbjct 630 GGCATCCATTCGGTTTTGAAGCTTCTAAAGCACCGTTCCATGGGAGCATTATCCCAGCAA 689 Query 39613 TTTCCACGCCGACTCATACTCTGCCTGATCCGGTATCTCCACAGTAACTGCCG--GAACT 39670 || ||||| || ||||||||||| |||| ||||| ||| || ||| | || Sbjct 690 TTACCACGGCGGCTCATACTCTGTTTGATTTTGTATCGCCA---TAGCTGTTGAATAAAG 746 Query 39671 GC-CTGCTCGTATAATGACTGCCTTGATCGCTGTGGAACATCACCCCGACGGGCTTACCA 39729 || ||||||| ||||| | ||||||||| |||||||| ||| || ||||| Sbjct 747 GCTTTGCTCGTGTAATGGCAGCCTTGATCCGAATGGAACATGACCTTTTGAGGTTTACCT 806 Query 39730 CGGGTTTCCCATGCCATTTCCAGTGCTTTCATGGT 39764 | || ||| | || | || || ||||| ||||| Sbjct 807 CTGGCTTCATAAGCGACTTGTAGCGCTTTTATGGT 841 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132066484162200